RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 NBPF12Q5TAG4 269 aaPredicted RBP11.83□□□□□ -0.52
NCKAP1-206ENST00000492058 CCDC191Q8NCU4 936 aa11.83□□□□□ -0.52
NCKAP1-206ENST00000492058 SH3TC2Q8TF17 1288 aa11.83□□□□□ -0.52
NCKAP1-206ENST00000492058 ELP3Q9H9T3 547 aa11.83□□□□□ -0.52
NCKAP1-206ENST00000492058 PCDHAC2Q9Y5I4 1007 aa11.83□□□□□ -0.52
NCKAP1-206ENST00000492058 MED23Q9ULK4 1368 aa11.82□□□□□ -0.52
NCKAP1-206ENST00000492058 KLRK1P26718 216 aa11.82□□□□□ -0.52
NCKAP1-206ENST00000492058 KCNJ4P48050 445 aa11.82□□□□□ -0.52
NCKAP1-206ENST00000492058 IREB2P48200 963 aaKnown RBP11.82□□□□□ -0.52
NCKAP1-206ENST00000492058 RBM5P52756 815 aaKnown RBP eCLIP11.82□□□□□ -0.52
NCKAP1-206ENST00000492058 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
NCKAP1-206ENST00000492058 GREM2Q9H772 168 aa11.82□□□□□ -0.52
NCKAP1-206ENST00000492058 BSDC1Q9NW68 430 aaPredicted RBP11.82□□□□□ -0.52
NCKAP1-206ENST00000492058 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
NCKAP1-206ENST00000492058 SZT2Q5T011 3432 aa11.81□□□□□ -0.52
NCKAP1-206ENST00000492058 MYO1BO43795 1136 aa11.81□□□□□ -0.52
NCKAP1-206ENST00000492058 USP2O75604 605 aaPredicted RBP11.81□□□□□ -0.52
NCKAP1-206ENST00000492058 CTSWP56202 376 aa11.81□□□□□ -0.52
NCKAP1-206ENST00000492058 TAF1CQ15572 869 aaPredicted RBP11.81□□□□□ -0.52
NCKAP1-206ENST00000492058 MAP3K11Q16584 847 aa11.81□□□□□ -0.52
NCKAP1-206ENST00000492058 OPTNQ96CV9 577 aa11.81□□□□□ -0.52
NCKAP1-206ENST00000492058 ZBED3Q96IU2 234 aaPredicted RBP11.81□□□□□ -0.52
NCKAP1-206ENST00000492058 ZFYVE28Q9HCC9 887 aa11.81□□□□□ -0.52
NCKAP1-206ENST00000492058 MMP14P50281 582 aa11.8□□□□□ -0.52
NCKAP1-206ENST00000492058 CFAP100Q494V2 611 aa11.8□□□□□ -0.52
NCKAP1-206ENST00000492058 ANKRD13AQ8IZ07 590 aa11.8□□□□□ -0.52
NCKAP1-206ENST00000492058 TTLL11Q8NHH1 800 aa11.8□□□□□ -0.52
NCKAP1-206ENST00000492058 JAG2Q9Y219 1238 aa11.8□□□□□ -0.52
NCKAP1-206ENST00000492058 LEMD3Q9Y2U8 911 aa11.8□□□□□ -0.52
NCKAP1-206ENST00000492058 ZNF804BA4D1E1 1349 aa11.8□□□□□ -0.52
NCKAP1-206ENST00000492058 A0A0C4DFX4 3053 aa11.8□□□□□ -0.52
NCKAP1-206ENST00000492058 CCL15-CCL14A0A0B4J2E2 113 aa11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 SPDYE16A6NNV3 312 aaPredicted RBP11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 HOXB7P09629 217 aa11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 IGHMBP2P38935 993 aaKnown RBP11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 RASA3Q14644 834 aa11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 CCL15Q16663 113 aa11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 PRMT6Q96LA8 375 aaPredicted RBP11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 METTL22Q9BUU2 404 aaPredicted RBP11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 ARHGAP39Q9C0H5 1083 aa11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 CUL9Q8IWT3 2517 aa11.79□□□□□ -0.52
NCKAP1-206ENST00000492058 SNAP23O00161 211 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 KIF22Q14807 665 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 CERS5Q8N5B7 392 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 BRI3BPQ8WY22 251 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 CDCA7LQ96GN5 454 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 MPHOSPH8Q99549 860 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 PRKD2Q9BZL6 878 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 ANKRD2Q9GZV1 360 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 CD209Q9NNX6 404 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 MAP3K2Q9Y2U5 619 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 PPP2R3BQ9Y5P8 575 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 BRCA2P51587 3418 aa11.78□□□□□ -0.52
NCKAP1-206ENST00000492058 SSC5DA1L4H1 1573 aa11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 TESPA1A2RU30 521 aaPredicted RBP11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 UNCXA6NJT0 531 aa11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 WDHD1O75717 1129 aaPredicted RBP11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 DDX58O95786 925 aaKnown RBP11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 PRSS12P56730 875 aa11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 MTFR1Q15390 333 aa11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 TJAP1Q5JTD0 557 aa11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 FAM43AQ8N2R8 423 aa11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 HELBQ8NG08 1087 aaPredicted RBP11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 IL21Q9HBE4 155 aa11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 MBIPQ9NS73 344 aa11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 AOX1Q06278 1338 aa11.77□□□□□ -0.53
NCKAP1-206ENST00000492058 TAF5LO75529 589 aa11.76□□□□□ -0.53
NCKAP1-206ENST00000492058 GTF2A2P52657 109 aa11.76□□□□□ -0.53
NCKAP1-206ENST00000492058 BIN2Q9UBW5 565 aaPredicted RBP11.76□□□□□ -0.53
NCKAP1-206ENST00000492058 PSME4Q14997 1843 aa11.76□□□□□ -0.53
NCKAP1-206ENST00000492058 RANBP2P49792 3224 aaKnown RBP11.75□□□□□ -0.53
NCKAP1-206ENST00000492058 ITGA6P23229 1130 aa11.75□□□□□ -0.53
NCKAP1-206ENST00000492058 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
NCKAP1-206ENST00000492058 UBE3BQ7Z3V4 1068 aa11.75□□□□□ -0.53
NCKAP1-206ENST00000492058 MTMR14Q8NCE2 650 aa11.75□□□□□ -0.53
NCKAP1-206ENST00000492058 RUNDC1Q96C34 613 aa11.75□□□□□ -0.53
NCKAP1-206ENST00000492058 MTRQ99707 1265 aa11.75□□□□□ -0.53
NCKAP1-206ENST00000492058 NR2E3Q9Y5X4 410 aa11.75□□□□□ -0.53
NCKAP1-206ENST00000492058 COL1A1P02452 1464 aaPredicted RBP11.75□□□□□ -0.53
NCKAP1-206ENST00000492058 PI4KAP2A4QPH2 592 aa11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 TCP10L2B9ZVM9 353 aa11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 SMAPO00193 183 aa11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 NRG2O14511 850 aaPredicted RBP11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 PLIN1O60240 522 aa11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 IGKV5-2P06315 115 aa11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 LACTBP83111 547 aaPredicted RBP11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 CHRNDQ07001 517 aa11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 NEXNQ0ZGT2 675 aa11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 PI4KAP1Q8N8J0 262 aa11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 HTATIP2Q9BUP3 242 aa11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 TDRD3Q9H7E2 651 aaKnown RBP11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 CSADQ9Y600 493 aa11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 V9GY48 417 aaPredicted RBP11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 RBBP6Q7Z6E9 1792 aaKnown RBP11.74□□□□□ -0.53
NCKAP1-206ENST00000492058 VGLL4Q14135 290 aa11.73□□□□□ -0.53
NCKAP1-206ENST00000492058 KSR2Q6VAB6 950 aa11.73□□□□□ -0.53
NCKAP1-206ENST00000492058 ZNF804AQ7Z570 1209 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms