RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ADORA1P30542 326 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 GTF2A2P52657 109 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 TIMM10P62072 90 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 MAP3K10Q02779 954 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 RASGRF1Q13972 1273 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 OTUD7BQ6GQQ9 843 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 ERO1BQ86YB8 467 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 CNKSR2Q8WXI2 1034 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 BRI3BPQ8WY22 251 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 IDI2Q9BXS1 227 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 ELP3Q9H9T3 547 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 TMOD2Q9NZR1 351 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 FAM198AQ9UFP1 575 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 TNNQ9UQP3 1299 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 SNCAIPQ9Y6H5 919 aa10.41□□□□□ -0.74
SMARCB1-207ENST00000491967 HTTP42858 3142 aa10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 RFX7Q2KHR2 1363 aa10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 ATRNL1Q5VV63 1379 aa10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 A0A1B0GUL7 405 aa10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 GNAI2P04899 355 aa10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 LDHBP07195 334 aaKnown RBP10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 CAP1Q01518 475 aa10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 NFIAQ12857 509 aa10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 CRHR2Q13324 411 aa10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 DIXDC1Q155Q3 683 aa10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 ZCCHC17Q9NP64 241 aaKnown RBP10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 AKAP2Q9Y2D5 859 aa10.4□□□□□ -0.74
SMARCB1-207ENST00000491967 AK9Q5TCS8 1911 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 PNMA6EA0A0J9YXQ4 647 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 NPM3O75607 178 aaKnown RBP10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 TFCP2Q12800 502 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 PPIL2Q13356 520 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 POLA2Q14181 598 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 DCAF15Q66K64 600 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 OTOP1Q7RTM1 612 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 POTEDQ86YR6 584 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 MIER1Q8N108 512 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 ZGPATQ8N5A5 531 aaKnown RBP10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 ZNF384Q8TF68 577 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 ZKSCAN4Q969J2 545 aaPredicted RBP10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 XAGE2Q96GT9 111 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 CSADQ9Y600 493 aa10.39□□□□□ -0.75
SMARCB1-207ENST00000491967 GPR75-ASB3A0A0A6YYF3 556 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 PHF20L1A8MW92 1017 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 IRF6O14896 467 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 ENTPD3O75355 529 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 CETPP11597 493 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 PPATQ06203 517 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 MVPQ14764 893 aaKnown RBP10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 NOL9Q5SY16 702 aaKnown RBP10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 ZKSCAN2Q63HK3 967 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 ZFPM1Q8IX07 1006 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 FAM43AQ8N2R8 423 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 TMEM57Q8N5G2 664 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 SSH3Q8TE77 659 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 ERO1AQ96HE7 468 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 WRNIP1Q96S55 665 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 ZNF341Q9BYN7 854 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 GPR108Q9NPR9 543 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 USP40Q9NVE5 1235 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 KCNH4Q9UQ05 1017 aa10.38□□□□□ -0.75
SMARCB1-207ENST00000491967 RBBP6Q7Z6E9 1792 aaKnown RBP10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 CCL15-CCL14A0A0B4J2E2 113 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 ZBTB7BO15156 539 aaPredicted RBP10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 WDHD1O75717 1129 aaPredicted RBP10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 MAP4K4O95819 1239 aaPredicted RBP10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 ARID4AP29374 1257 aaPredicted RBP10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 INPP5BP32019 993 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 ATP8B2P98198 1209 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 SP3Q02447 781 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 MOGSQ13724 837 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 CCL15Q16663 113 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 SPTY2D1Q68D10 685 aaPredicted RBP10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 MIGA2Q7L4E1 593 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 SH3BP5LQ7L8J4 393 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 OTUD5Q96G74 571 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 HMG20BQ9P0W2 317 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 PTPN22Q9Y2R2 807 aa10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 NOP58Q9Y2X3 529 aaKnown RBP10.37□□□□□ -0.75
SMARCB1-207ENST00000491967 PHIPQ8WWQ0 1821 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 DOCK2Q92608 1830 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 BTBD19C9JJ37 291 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 TLR2O60603 784 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 IGSF3O75054 1194 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 RLBP1P12271 317 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 SOX10P56693 466 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 RHBDL3P58872 404 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 SNAPC2Q13487 334 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 SPATA5Q8NB90 893 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 FRAT1Q92837 279 aaPredicted RBP10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 ARMC5Q96C12 935 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 ZNF512BQ96KM6 892 aaPredicted RBP10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 ZFYVE28Q9HCC9 887 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 TRIM17Q9Y577 477 aa10.36□□□□□ -0.75
SMARCB1-207ENST00000491967 ADGRA2Q96PE1 1338 aa10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 PTPRFP10586 1907 aa10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 CXCL11O14625 94 aa10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 TBC1D12O60347 775 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 284.6 ms