RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 APAF1O14727 1248 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 INHAP05111 366 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 BCRP11274 1271 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 FOXO4P98177 505 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 MOGSQ13724 837 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 DCAF15Q66K64 600 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 LDHAL6AQ6ZMR3 332 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 MIGA2Q7L4E1 593 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 PAWRQ96IZ0 340 aaKnown RBP17.63■□□□□ 0.41
ATG4B-222ENST00000491867 FAM84BQ96KN1 310 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-222ENST00000491867 ZNF341Q9BYN7 854 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 CNNM1Q9NRU3 951 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 TMOD2Q9NZR1 351 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 KCNH4Q9UQ05 1017 aa17.63■□□□□ 0.41
ATG4B-222ENST00000491867 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
ATG4B-222ENST00000491867 TAF7LQ5H9L4 462 aa17.62■□□□□ 0.41
ATG4B-222ENST00000491867 FAM83AQ86UY5 434 aa17.62■□□□□ 0.41
ATG4B-222ENST00000491867 C7orf61Q8IZ16 206 aa17.62■□□□□ 0.41
ATG4B-222ENST00000491867 LINS1Q8NG48 757 aa17.62■□□□□ 0.41
ATG4B-222ENST00000491867 PARK7Q99497 189 aaKnown RBP17.62■□□□□ 0.41
ATG4B-222ENST00000491867 ZMYND8Q9ULU4 1186 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-222ENST00000491867 PRUNE2Q8WUY3 3088 aa17.62■□□□□ 0.41
ATG4B-222ENST00000491867 CYP2C8P10632 490 aa17.61■□□□□ 0.41
ATG4B-222ENST00000491867 CAPN2P17655 700 aa17.61■□□□□ 0.41
ATG4B-222ENST00000491867 FLT3LGP49771 235 aa17.61■□□□□ 0.41
ATG4B-222ENST00000491867 HDLBPQ00341 1268 aaKnown RBP17.61■□□□□ 0.41
ATG4B-222ENST00000491867 DDX10Q13206 875 aaKnown RBP17.61■□□□□ 0.41
ATG4B-222ENST00000491867 DIS3LQ8TF46 1054 aaKnown RBP17.61■□□□□ 0.41
ATG4B-222ENST00000491867 DNAAF4Q8WXU2 420 aa17.61■□□□□ 0.41
ATG4B-222ENST00000491867 TEKT1Q969V4 418 aa17.61■□□□□ 0.41
ATG4B-222ENST00000491867 IQSEC3Q9UPP2 1182 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-222ENST00000491867 ALPK3Q96L96 1907 aa17.6■□□□□ 0.41
ATG4B-222ENST00000491867 BCAMP50895 628 aa17.6■□□□□ 0.41
ATG4B-222ENST00000491867 CHAF1AQ13111 956 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-222ENST00000491867 UBE4AQ14139 1066 aa17.6■□□□□ 0.41
ATG4B-222ENST00000491867 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
ATG4B-222ENST00000491867 LRIT3Q3SXY7 679 aa17.6■□□□□ 0.41
ATG4B-222ENST00000491867 FKBP1CQ5VVH2 108 aa17.6■□□□□ 0.41
ATG4B-222ENST00000491867 LMBR1LQ6UX01 489 aa17.6■□□□□ 0.41
ATG4B-222ENST00000491867 NECAB2Q7Z6G3 386 aa17.6■□□□□ 0.41
ATG4B-222ENST00000491867 CRISPLD2Q9H0B8 497 aa17.6■□□□□ 0.41
ATG4B-222ENST00000491867 PAK6Q9NQU5 681 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-222ENST00000491867 FLIIQ13045 1269 aa17.59■□□□□ 0.41
ATG4B-222ENST00000491867 FKBP5Q13451 457 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-222ENST00000491867 GPAT2Q6NUI2 795 aa17.59■□□□□ 0.41
ATG4B-222ENST00000491867 TSR2Q969E8 191 aaKnown RBP17.59■□□□□ 0.41
ATG4B-222ENST00000491867 ZDHHC15Q96MV8 337 aa17.59■□□□□ 0.41
ATG4B-222ENST00000491867 MGAMO43451 1857 aa17.58■□□□□ 0.41
ATG4B-222ENST00000491867 SPTBN5Q9NRC6 3674 aaKnown RBP17.58■□□□□ 0.41
ATG4B-222ENST00000491867 EPHA10Q5JZY3 1008 aa17.58■□□□□ 0.4
ATG4B-222ENST00000491867 APOBEC3HQ6NTF7 200 aaKnown RBP17.58■□□□□ 0.4
ATG4B-222ENST00000491867 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.58■□□□□ 0.4
ATG4B-222ENST00000491867 PXYLP1Q8TE99 480 aa17.58■□□□□ 0.4
ATG4B-222ENST00000491867 TAOK2Q9UL54 1235 aa17.58■□□□□ 0.4
ATG4B-222ENST00000491867 EYSQ5T1H1 3165 aa17.58■□□□□ 0.4
ATG4B-222ENST00000491867 DOCK3Q8IZD9 2030 aa17.57■□□□□ 0.4
ATG4B-222ENST00000491867 SYN1P17600 705 aa17.57■□□□□ 0.4
ATG4B-222ENST00000491867 MAGEA10P43363 369 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-222ENST00000491867 VPS37DQ86XT2 251 aa17.57■□□□□ 0.4
ATG4B-222ENST00000491867 TDHQ8IZJ6 230 aa17.57■□□□□ 0.4
ATG4B-222ENST00000491867 TBC1D22AQ8WUA7 517 aa17.57■□□□□ 0.4
ATG4B-222ENST00000491867 ZNF112Q9UJU3 913 aa17.57■□□□□ 0.4
ATG4B-222ENST00000491867 RPAP1Q9BWH6 1393 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-222ENST00000491867 TNPO2O14787 897 aaKnown RBP17.56■□□□□ 0.4
ATG4B-222ENST00000491867 FRAT2O75474 233 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-222ENST00000491867 IRF5Q13568 498 aa17.56■□□□□ 0.4
ATG4B-222ENST00000491867 TWISTNBQ3B726 338 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-222ENST00000491867 FBXO33Q7Z6M2 555 aa17.56■□□□□ 0.4
ATG4B-222ENST00000491867 CXCL11O14625 94 aa17.55■□□□□ 0.4
ATG4B-222ENST00000491867 NOL9Q5SY16 702 aaKnown RBP17.55■□□□□ 0.4
ATG4B-222ENST00000491867 MRIQ9BWK5 157 aa17.55■□□□□ 0.4
ATG4B-222ENST00000491867 PUS3Q9BZE2 481 aaKnown RBP17.54■□□□□ 0.4
ATG4B-222ENST00000491867 UBE2OQ9C0C9 1292 aaKnown RBP17.54■□□□□ 0.4
ATG4B-222ENST00000491867 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.54■□□□□ 0.4
ATG4B-222ENST00000491867 DNAH12Q6ZR08 3092 aa17.54■□□□□ 0.4
ATG4B-222ENST00000491867 TCP10Q12799 353 aa17.53■□□□□ 0.4
ATG4B-222ENST00000491867 ANKLE1Q8NAG6 615 aa17.53■□□□□ 0.4
ATG4B-222ENST00000491867 FAM151AQ8WW52 585 aa17.53■□□□□ 0.4
ATG4B-222ENST00000491867 HHIPL2Q6UWX4 724 aa17.52■□□□□ 0.4
ATG4B-222ENST00000491867 GADL1Q6ZQY3 521 aa17.52■□□□□ 0.4
ATG4B-222ENST00000491867 FASTKD5Q7L8L6 764 aaKnown RBP17.52■□□□□ 0.4
ATG4B-222ENST00000491867 NBPF3Q9H094 633 aa17.52■□□□□ 0.4
ATG4B-222ENST00000491867 AK9Q5TCS8 1911 aa17.52■□□□□ 0.4
ATG4B-222ENST00000491867 MAST3O60307 1309 aa17.51■□□□□ 0.39
ATG4B-222ENST00000491867 RPTORQ8N122 1335 aa17.51■□□□□ 0.39
ATG4B-222ENST00000491867 A0A0G2JLL6 359 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-222ENST00000491867 F6X3S4 739 aa17.51■□□□□ 0.39
ATG4B-222ENST00000491867 CAVIN4Q5BKX8 364 aa17.51■□□□□ 0.39
ATG4B-222ENST00000491867 BEND3Q5T5X7 828 aa17.51■□□□□ 0.39
ATG4B-222ENST00000491867 PRRT2Q7Z6L0 340 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-222ENST00000491867 COA7Q96BR5 231 aa17.51■□□□□ 0.39
ATG4B-222ENST00000491867 ZHX2Q9Y6X8 837 aa17.51■□□□□ 0.39
ATG4B-222ENST00000491867 GRM8O00222 908 aa17.5■□□□□ 0.39
ATG4B-222ENST00000491867 SMCR8Q8TEV9 937 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-222ENST00000491867 GUCD1Q96NT3 240 aa17.5■□□□□ 0.39
ATG4B-222ENST00000491867 PRKRIP1Q9H875 184 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-222ENST00000491867 SUGT1Q9Y2Z0 365 aa17.5■□□□□ 0.39
ATG4B-222ENST00000491867 MROH5Q6ZUA9 1318 aa17.49■□□□□ 0.39
ATG4B-222ENST00000491867 NFIAQ12857 509 aa17.49■□□□□ 0.39
ATG4B-222ENST00000491867 CDC42EP5Q6NZY7 148 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms