RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ERO1BQ86YB8 467 aa10.84□□□□□ -0.67
NUP50-217ENST00000491860 FAM151AQ8WW52 585 aa10.84□□□□□ -0.67
NUP50-217ENST00000491860 MEIS3Q99687 375 aa10.84□□□□□ -0.67
NUP50-217ENST00000491860 ZFYVE28Q9HCC9 887 aa10.84□□□□□ -0.67
NUP50-217ENST00000491860 FZD1Q9UP38 647 aa10.84□□□□□ -0.67
NUP50-217ENST00000491860 AK9Q5TCS8 1911 aa10.84□□□□□ -0.67
NUP50-217ENST00000491860 AOX1Q06278 1338 aa10.84□□□□□ -0.67
NUP50-217ENST00000491860 POTEFA5A3E0 1075 aa10.83□□□□□ -0.68
NUP50-217ENST00000491860 SPDYE5A6NIY4 337 aa10.83□□□□□ -0.68
NUP50-217ENST00000491860 IGSF3O75054 1194 aa10.83□□□□□ -0.68
NUP50-217ENST00000491860 MAP4K4O95819 1239 aaPredicted RBP10.83□□□□□ -0.68
NUP50-217ENST00000491860 GNAI2P04899 355 aa10.83□□□□□ -0.68
NUP50-217ENST00000491860 CETPP11597 493 aa10.83□□□□□ -0.68
NUP50-217ENST00000491860 PPATQ06203 517 aa10.83□□□□□ -0.68
NUP50-217ENST00000491860 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.83□□□□□ -0.68
NUP50-217ENST00000491860 ARMC5Q96C12 935 aa10.83□□□□□ -0.68
NUP50-217ENST00000491860 WRNIP1Q96S55 665 aa10.83□□□□□ -0.68
NUP50-217ENST00000491860 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.83□□□□□ -0.68
NUP50-217ENST00000491860 TRIM17Q9Y577 477 aa10.83□□□□□ -0.68
NUP50-217ENST00000491860 BRCA2P51587 3418 aa10.83□□□□□ -0.68
NUP50-217ENST00000491860 CCL15-CCL14A0A0B4J2E2 113 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 FXR1P51114 621 aaKnown RBP eCLIP10.82□□□□□ -0.68
NUP50-217ENST00000491860 SP3Q02447 781 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 CRHR2Q13324 411 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 PPIL2Q13356 520 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 SNAPC2Q13487 334 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 GRIK5Q16478 980 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 CCL15Q16663 113 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 CCDC102BQ68D86 513 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 DZIP1Q86YF9 867 aaKnown RBP10.82□□□□□ -0.68
NUP50-217ENST00000491860 MS4A4AQ96JQ5 239 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 PTPN22Q9Y2R2 807 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 DAGLAQ9Y4D2 1042 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 MYH2Q9UKX2 1941 aa10.82□□□□□ -0.68
NUP50-217ENST00000491860 A0A1B0GUL7 405 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 ENTPD3O75355 529 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 GNRH1P01148 92 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 TRIM27P14373 513 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 PRDX5P30044 214 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 GJA5P36382 358 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 G3BP1Q13283 466 aaKnown RBP eCLIP10.81□□□□□ -0.68
NUP50-217ENST00000491860 KIF22Q14807 665 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 TAF1CQ15572 869 aaPredicted RBP10.81□□□□□ -0.68
NUP50-217ENST00000491860 GORABQ5T7V8 394 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 ZKSCAN2Q63HK3 967 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 CDC42EP5Q6NZY7 148 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 FRAT1Q92837 279 aaPredicted RBP10.81□□□□□ -0.68
NUP50-217ENST00000491860 OTUD5Q96G74 571 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 FAM163AQ96GL9 167 aaPredicted RBP10.81□□□□□ -0.68
NUP50-217ENST00000491860 IDI2Q9BXS1 227 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 EFCC1Q9HA90 598 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 USP40Q9NVE5 1235 aa10.81□□□□□ -0.68
NUP50-217ENST00000491860 PA2G4Q9UQ80 394 aaKnown RBP10.81□□□□□ -0.68
NUP50-217ENST00000491860 LDHCP07864 332 aa10.8□□□□□ -0.68
NUP50-217ENST00000491860 PHKA1P46020 1223 aa10.8□□□□□ -0.68
NUP50-217ENST00000491860 CACNB3P54284 484 aa10.8□□□□□ -0.68
NUP50-217ENST00000491860 GSTO1P78417 241 aa10.8□□□□□ -0.68
NUP50-217ENST00000491860 NOL9Q5SY16 702 aaKnown RBP10.8□□□□□ -0.68
NUP50-217ENST00000491860 ERICH6Q7L0X2 663 aa10.8□□□□□ -0.68
NUP50-217ENST00000491860 BRI3BPQ8WY22 251 aa10.8□□□□□ -0.68
NUP50-217ENST00000491860 PTPN18Q99952 460 aa10.8□□□□□ -0.68
NUP50-217ENST00000491860 SNCAIPQ9Y6H5 919 aa10.8□□□□□ -0.68
NUP50-217ENST00000491860 GAKO14976 1311 aa10.8□□□□□ -0.68
NUP50-217ENST00000491860 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
NUP50-217ENST00000491860 UQCRFS1P1P0C7P4 283 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 PRMT2P55345 433 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 TIMM10P62072 90 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 NBPF11Q86T75 865 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 CDAN1Q8IWY9 1227 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 FTSJ3Q8IY81 847 aaKnown RBP10.79□□□□□ -0.68
NUP50-217ENST00000491860 XAGE2Q96GT9 111 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 NEUROD6Q96NK8 337 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 GPR108Q9NPR9 543 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 ABCF2Q9UG63 623 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 ZNF112Q9UJU3 913 aa10.79□□□□□ -0.68
NUP50-217ENST00000491860 KIAA0100Q14667 2235 aaKnown RBP10.78□□□□□ -0.68
NUP50-217ENST00000491860 IRF6O14896 467 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 TLR2O60603 784 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 MS4A1P11836 297 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 TCP10Q12799 353 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 TFCP2Q12800 502 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 RASGRF1Q13972 1273 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 CD99L2Q8TCZ2 262 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 ZKSCAN4Q969J2 545 aaPredicted RBP10.78□□□□□ -0.68
NUP50-217ENST00000491860 PICK1Q9NRD5 415 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 DOCK2Q92608 1830 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 MROH7-TTC4A0A0A0MT08 1334 aa10.78□□□□□ -0.68
NUP50-217ENST00000491860 CXCL11O14625 94 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 BCAR3O75815 825 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 EN2P19622 333 aaPredicted RBP10.77□□□□□ -0.69
NUP50-217ENST00000491860 HOXD10P28358 340 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 ARID4AP29374 1257 aaPredicted RBP10.77□□□□□ -0.69
NUP50-217ENST00000491860 ADORA1P30542 326 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 HNRNPUQ00839 825 aaKnown RBP eCLIP10.77□□□□□ -0.69
NUP50-217ENST00000491860 CCDC158Q5M9N0 1113 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 MIGA2Q7L4E1 593 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 ANKRD23Q86SG2 305 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 ZSCAN29Q8IWY8 852 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms