RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 NME2P22392 152 aa6.65□□□□□ -1.34
RTN4-215ENST00000491592 NRG1Q02297 640 aaPredicted RBP6.65□□□□□ -1.34
RTN4-215ENST00000491592 HS2ST1Q7LGA3 356 aa6.65□□□□□ -1.34
RTN4-215ENST00000491592 UBASH3BQ8TF42 649 aa6.65□□□□□ -1.34
RTN4-215ENST00000491592 KCNK4Q9NYG8 393 aa6.65□□□□□ -1.34
RTN4-215ENST00000491592 WISP1O95388 367 aa6.64□□□□□ -1.35
RTN4-215ENST00000491592 CYP11A1P05108 521 aa6.64□□□□□ -1.35
RTN4-215ENST00000491592 LIG3P49916 1009 aa6.64□□□□□ -1.35
RTN4-215ENST00000491592 ADGRE1Q14246 886 aa6.64□□□□□ -1.35
RTN4-215ENST00000491592 MAP3K11Q16584 847 aa6.64□□□□□ -1.35
RTN4-215ENST00000491592 ERMP1Q7Z2K6 904 aa6.64□□□□□ -1.35
RTN4-215ENST00000491592 STK35Q8TDR2 534 aa6.64□□□□□ -1.35
RTN4-215ENST00000491592 CORO1BQ9BR76 489 aa6.64□□□□□ -1.35
RTN4-215ENST00000491592 CWC22Q9HCG8 908 aaKnown RBP6.64□□□□□ -1.35
RTN4-215ENST00000491592 SAMM50Q9Y512 469 aa6.64□□□□□ -1.35
RTN4-215ENST00000491592 KRTAP9-6A0A140TA67 174 aa6.63□□□□□ -1.35
RTN4-215ENST00000491592 LOC100289279A0A1B0GTE1 492 aa6.63□□□□□ -1.35
RTN4-215ENST00000491592 ECEL1O95672 775 aa6.63□□□□□ -1.35
RTN4-215ENST00000491592 GSTP1P09211 210 aaKnown RBP6.63□□□□□ -1.35
RTN4-215ENST00000491592 RLBP1P12271 317 aa6.63□□□□□ -1.35
RTN4-215ENST00000491592 MAOBP27338 520 aa6.63□□□□□ -1.35
RTN4-215ENST00000491592 HDLBPQ00341 1268 aaKnown RBP6.63□□□□□ -1.35
RTN4-215ENST00000491592 POU4F3Q15319 338 aa6.63□□□□□ -1.35
RTN4-215ENST00000491592 TTBK2Q6IQ55 1244 aa6.63□□□□□ -1.35
RTN4-215ENST00000491592 SHISA2Q6UWI4 295 aa6.63□□□□□ -1.35
RTN4-215ENST00000491592 ACAD11Q709F0 780 aa6.63□□□□□ -1.35
RTN4-215ENST00000491592 RNF34Q969K3 372 aa6.63□□□□□ -1.35
RTN4-215ENST00000491592 LENG1Q96BZ8 264 aaPredicted RBP6.63□□□□□ -1.35
RTN4-215ENST00000491592 F6X3S4 739 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 CTSBP07858 339 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 SELPP16109 830 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 MBTPS1Q14703 1052 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 RASIP1Q5U651 963 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 IGF2-ASQ6U949 168 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.62□□□□□ -1.35
RTN4-215ENST00000491592 PDZD3Q86UT5 571 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 TXNRD3Q86VQ6 643 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 TICAM2Q86XR7 235 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 EMILIN2Q9BXX0 1053 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 MRPL18Q9H0U6 180 aaKnown RBP6.62□□□□□ -1.35
RTN4-215ENST00000491592 IGSF5Q9NSI5 407 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 GGT7Q9UJ14 662 aa6.62□□□□□ -1.35
RTN4-215ENST00000491592 NCLP19338 710 aaKnown RBP6.61□□□□□ -1.35
RTN4-215ENST00000491592 ARNTP27540 789 aa6.61□□□□□ -1.35
RTN4-215ENST00000491592 RPS26P62854 115 aaKnown RBP6.61□□□□□ -1.35
RTN4-215ENST00000491592 ZNF252P-AS1Q0IIN9 211 aa6.61□□□□□ -1.35
RTN4-215ENST00000491592 LRP8Q14114 963 aa6.61□□□□□ -1.35
RTN4-215ENST00000491592 DUOXA2Q1HG44 320 aa6.61□□□□□ -1.35
RTN4-215ENST00000491592 LLGL2Q6P1M3 1020 aa6.61□□□□□ -1.35
RTN4-215ENST00000491592 METTL16Q86W50 562 aaKnown RBP6.61□□□□□ -1.35
RTN4-215ENST00000491592 ZC3H12CQ9C0D7 883 aaKnown RBP6.61□□□□□ -1.35
RTN4-215ENST00000491592 CBX8Q9HC52 389 aa6.61□□□□□ -1.35
RTN4-215ENST00000491592 KBTBD4Q9NVX7 518 aa6.61□□□□□ -1.35
RTN4-215ENST00000491592 BMP6P22004 513 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 PWP1Q13610 501 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 PDE3AQ14432 1141 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 LRRC14Q15048 493 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 HP1BP3Q5SSJ5 553 aaPredicted RBP6.6□□□□□ -1.35
RTN4-215ENST00000491592 MAP1SQ66K74 1059 aaPredicted RBP6.6□□□□□ -1.35
RTN4-215ENST00000491592 KIAA1211Q6ZU35 1233 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 CERS3Q8IU89 383 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 PHC3Q8NDX5 983 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 RHOVQ96L33 236 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 RSRP1Q9BUV0 290 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 RUSC1Q9BVN2 902 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 COPRSQ9NQ92 184 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 USP21Q9UK80 565 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 TLR6Q9Y2C9 796 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 PCDHGB7Q9Y5F8 929 aa6.6□□□□□ -1.35
RTN4-215ENST00000491592 F8W735 103 aaPredicted RBP6.59□□□□□ -1.35
RTN4-215ENST00000491592 DLGAP3O95886 979 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 LMNB1P20700 586 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 HNRNPUQ00839 825 aaKnown RBP eCLIP6.59□□□□□ -1.35
RTN4-215ENST00000491592 ZNF394Q53GI3 561 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 AGMOQ6ZNB7 445 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 USP48Q86UV5 1035 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 AGGF1Q8N302 714 aaeCLIP6.59□□□□□ -1.35
RTN4-215ENST00000491592 GRIN3AQ8TCU5 1115 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 KCNB2Q92953 911 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 GAL3ST3Q96A11 431 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 TMEM74Q96NL1 305 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 RNF208Q9H0X6 261 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 CCDC86Q9H6F5 360 aaKnown RBP6.59□□□□□ -1.35
RTN4-215ENST00000491592 KRT82Q9NSB4 513 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 CYP8B1Q9UNU6 501 aa6.59□□□□□ -1.35
RTN4-215ENST00000491592 TRIM37O94972 964 aa6.58□□□□□ -1.36
RTN4-215ENST00000491592 CENPBP07199 599 aaPredicted RBP6.58□□□□□ -1.36
RTN4-215ENST00000491592 TFE3P19532 575 aaPredicted RBP6.58□□□□□ -1.36
RTN4-215ENST00000491592 GBP2P32456 591 aaPredicted RBP6.58□□□□□ -1.36
RTN4-215ENST00000491592 SEPT6Q14141 434 aa6.58□□□□□ -1.36
RTN4-215ENST00000491592 C9orf131Q5VYM1 1079 aa6.58□□□□□ -1.36
RTN4-215ENST00000491592 NT5DC4Q86YG4 428 aa6.58□□□□□ -1.36
RTN4-215ENST00000491592 RELL1Q8IUW5 271 aa6.58□□□□□ -1.36
RTN4-215ENST00000491592 TP53INP1Q96A56 240 aa6.58□□□□□ -1.36
RTN4-215ENST00000491592 RAD51AP2Q09MP3 1159 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 SCARA3Q6AZY7 606 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 MPRIPQ6WCQ1 1025 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 ANKRD13AQ8IZ07 590 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 GPBAR1Q8TDU6 330 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 ACSBG1Q96GR2 724 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms