RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	PRKRIP1	Q9H875	184 aa	Predicted RBP	24.36	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	CUL9	Q8IWT3	2517 aa		24.36	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	EVI5	O60447	810 aa		24.35	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	FARP2	O94887	1054 aa	Predicted RBP	24.35	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	FCGRT	P55899	365 aa		24.35	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	CAVIN4	Q5BKX8	364 aa		24.35	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	MIGA2	Q7L4E1	593 aa		24.35	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	WWC1	Q8IX03	1113 aa		24.35	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	C9orf78	Q9NZ63	289 aa	Predicted RBP	24.35	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	24.35	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	ZSWIM8	A7E2V4	1837 aa		24.35	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334		F6X3S4	739 aa		24.34	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	SGPL1	O95470	568 aa		24.34	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	SLAIN1	Q8ND83	568 aa		24.34	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	KCNH4	Q9UQ05	1017 aa		24.34	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	ARAP2	Q8WZ64	1704 aa		24.34	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	IL16	Q14005	1332 aa		24.34	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	MROH5	Q6ZUA9	1318 aa		24.34	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	INPP5B	P32019	993 aa		24.33	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	APOBEC3H	Q6NTF7	200 aa	Known RBP	24.33	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	PUS3	Q9BZE2	481 aa	Known RBP	24.33	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	SUGT1	Q9Y2Z0	365 aa		24.33	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334		A0A1B0GUL6	1792 aa		24.33	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	VAMP4	O75379	141 aa		24.32	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	PRKCZ	Q05513	592 aa		24.32	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	PARK7	Q99497	189 aa	Known RBP	24.32	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	MAST3	O60307	1309 aa		24.32	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	ADGRA2	Q96PE1	1338 aa		24.32	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	TFRC	P02786	760 aa	Known RBP	24.31	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	HHIPL2	Q6UWX4	724 aa		24.31	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	UNC93B1	Q9H1C4	597 aa		24.31	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	ZNF112	Q9UJU3	913 aa		24.31	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	FAM151A	Q8WW52	585 aa		24.3	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	COL6A3	P12111	3177 aa		24.3	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	RPAP1	Q9BWH6	1393 aa	Predicted RBP	24.29	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	ADCY3	O60266	1144 aa		24.29	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	BCR	P11274	1271 aa		24.29	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	STAP2	Q9UGK3	403 aa		24.29	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	CXCL11	O14625	94 aa		24.28	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	MNX1	P50219	401 aa	Predicted RBP	24.28	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	MOGS	Q13724	837 aa		24.28	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	GABRQ	Q9UN88	632 aa		24.28	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	CACNA1F	O60840	1977 aa		24.28	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	SOX1	O00570	391 aa	Predicted RBP	24.27	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	ALDH1L1	O75891	902 aa		24.27	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	LRCH3	Q96II8	777 aa		24.27	■■□□□ 1.48
CDK5RAP2-218	ENST00000491334	CYP2C8	P10632	490 aa		24.26	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	BCAM	P50895	628 aa		24.26	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	METTL24	Q5JXM2	366 aa		24.26	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	NOL9	Q5SY16	702 aa	Known RBP	24.26	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	PXYLP1	Q8TE99	480 aa		24.26	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	FLT3LG	P49771	235 aa		24.25	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	GPAT2	Q6NUI2	795 aa		24.25	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	FASTKD5	Q7L8L6	764 aa	Known RBP	24.25	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	DEFB118	Q96PH6	123 aa		24.25	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	PDE8B	O95263	885 aa		24.24	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	TCP10	Q12799	353 aa		24.24	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	GPR153	Q6NV75	609 aa		24.24	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	SRCIN1	Q9C0H9	1055 aa		24.24	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	FANCI	Q9NVI1	1328 aa		24.24	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	LAMA3	Q16787	3333 aa		24.23	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	INHA	P05111	366 aa		24.23	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	IRF5	Q13568	498 aa		24.23	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	NCBP3	Q53F19	620 aa	Known RBP	24.23	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	SLC4A10	Q6U841	1118 aa		24.23	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	SUCLG2	Q96I99	432 aa		24.23	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	ELN	P15502	786 aa		24.22	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	BMP8B	P34820	402 aa		24.22	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	EXOSC9	Q06265	439 aa	Known RBP	24.22	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	LRRC24	Q50LG9	513 aa		24.22	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	WDR66	Q8TBY9	1149 aa		24.22	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	TNPO2	O14787	897 aa	Known RBP	24.21	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	IFIT1	P09914	478 aa	Known RBP	24.21	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	NECAB2	Q7Z6G3	386 aa		24.21	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	KAZALD1	Q96I82	304 aa		24.21	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	PAWR	Q96IZ0	340 aa	Known RBP	24.21	■■□□□ 1.47
CDK5RAP2-218	ENST00000491334	CDC42EP5	Q6NZY7	148 aa		24.2	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	CRISPLD2	Q9H0B8	497 aa		24.2	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	PAK6	Q9NQU5	681 aa	Predicted RBP	24.2	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	PICK1	Q9NRD5	415 aa		24.2	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	SLC45A1	Q9Y2W3	748 aa		24.2	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	ZHX2	Q9Y6X8	837 aa		24.2	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	KIF16B	Q96L93	1317 aa		24.19	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	ZEB1	P37275	1124 aa	Predicted RBP	24.19	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	WDR63	Q8IWG1	891 aa		24.19	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	DEFB123	Q8N688	67 aa		24.19	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	VGLL2	Q8N8G2	317 aa		24.19	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	GDF15	Q99988	308 aa		24.19	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334		A0A0G2JLL6	359 aa	Predicted RBP	24.18	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	NBPF7	P0C2Y1	421 aa	Predicted RBP	24.18	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	PRRT2	Q7Z6L0	340 aa	Predicted RBP	24.18	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	COA7	Q96BR5	231 aa		24.18	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	BICC1	Q9H694	974 aa	Known RBP	24.18	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	DAGLA	Q9Y4D2	1042 aa		24.18	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	NFIA	Q12857	509 aa		24.17	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	PUM3	Q15397	648 aa	Known RBP	24.17	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	RABL6	Q3YEC7	729 aa	Predicted RBP	24.17	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	GADL1	Q6ZQY3	521 aa		24.17	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	SMCR8	Q8TEV9	937 aa	Predicted RBP	24.17	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	USP40	Q9NVE5	1235 aa		24.17	■■□□□ 1.46

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms