RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 APOBEC3HQ6NTF7 200 aaKnown RBP13□□□□□ -0.33
CACNA1C-227ENST00000491104 FAM227BQ96M60 508 aa13□□□□□ -0.33
CACNA1C-227ENST00000491104 ZDHHC15Q96MV8 337 aa13□□□□□ -0.33
CACNA1C-227ENST00000491104 PUS7LQ9H0K6 701 aaKnown RBP13□□□□□ -0.33
CACNA1C-227ENST00000491104 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
CACNA1C-227ENST00000491104 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 GPR75-ASB3A0A0A6YYF3 556 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 MBD4O95243 580 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 ZMYM1Q5SVZ6 1142 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 CDC42EP5Q6NZY7 148 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 CCDC129Q6ZRS4 1044 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 SLF2Q8IX21 1173 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 LCORLQ8N3X6 602 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 MTMR14Q8NCE2 650 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 SH3RF3Q8TEJ3 882 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 APPBP2Q92624 585 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 OSBP2Q969R2 916 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 ARMT1Q9H993 441 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 NAV1Q8NEY1 1877 aa12.99□□□□□ -0.33
CACNA1C-227ENST00000491104 MAGEB6P1A0A0J9YX57 407 aa12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 ZFYP08048 801 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 RHBDL3P58872 404 aa12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 USP50Q70EL3 339 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 ZNF784Q8NCA9 323 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 RIOK1Q9BRS2 568 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 MRIQ9BWK5 157 aa12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 IL25Q9H293 177 aa12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 VEZTQ9HBM0 779 aa12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 DIAPH3Q9NSV4 1193 aa12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 USP40Q9NVE5 1235 aa12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 GGA3Q9NZ52 723 aa12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 ZNF70Q9UC06 446 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-227ENST00000491104 KIF3CO14782 793 aa12.97□□□□□ -0.33
CACNA1C-227ENST00000491104 IGSF3O75054 1194 aa12.97□□□□□ -0.33
CACNA1C-227ENST00000491104 CHMLP26374 656 aa12.97□□□□□ -0.33
CACNA1C-227ENST00000491104 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-227ENST00000491104 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
CACNA1C-227ENST00000491104 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-227ENST00000491104 CWC27Q6UX04 472 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-227ENST00000491104 NOL10Q9BSC4 688 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-227ENST00000491104 BAZ2AQ9UIF9 1905 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 GPAA1O43292 621 aa12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 PRKAB2O43741 272 aa12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 BAG3O95817 575 aa12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 MMP14P50281 582 aa12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 NFIAQ12857 509 aa12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 DLK2Q6UY11 383 aa12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 ZNF589Q86UQ0 364 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 PNMA8AQ86V59 439 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 AIDAQ96BJ3 306 aa12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 DDX4Q9NQI0 724 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.33
CACNA1C-227ENST00000491104 MYH1P12882 1939 aa12.96□□□□□ -0.34
CACNA1C-227ENST00000491104 ADM5C9JUS6 153 aa12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 MYO1BO43795 1136 aa12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 CDC45O75419 566 aa12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 WDHD1O75717 1129 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 PPP4CP60510 307 aa12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 PICALMQ13492 652 aa12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 MAP1SQ66K74 1059 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 TGFBRAP1Q8WUH2 860 aa12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 SDR42E1Q8WUS8 393 aa12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 HELLSQ9NRZ9 838 aa12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 DDX60LQ5H9U9 1706 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-227ENST00000491104 HIP1O00291 1037 aa12.94□□□□□ -0.34
CACNA1C-227ENST00000491104 TCP10Q12799 353 aa12.94□□□□□ -0.34
CACNA1C-227ENST00000491104 MCMDC2Q4G0Z9 681 aa12.94□□□□□ -0.34
CACNA1C-227ENST00000491104 TMED8Q6PL24 325 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-227ENST00000491104 MAPKAPK5Q8IW41 473 aa12.94□□□□□ -0.34
CACNA1C-227ENST00000491104 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-227ENST00000491104 GLIS2Q9BZE0 524 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-227ENST00000491104 SLC4A4Q9Y6R1 1079 aa12.94□□□□□ -0.34
CACNA1C-227ENST00000491104 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
CACNA1C-227ENST00000491104 SIPA1L1O43166 1804 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 PLCG2P16885 1265 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 USP5P45974 858 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 SLC4A8Q2Y0W8 1093 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 VPS53Q5VIR6 699 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 PRAMEF18Q5VWM3 479 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 CDAN1Q8IWY9 1227 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 ZFPM1Q8IX07 1006 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 DCPSQ96C86 337 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 CRNKL1Q9BZJ0 848 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 LAMB1P07942 1786 aa12.93□□□□□ -0.34
CACNA1C-227ENST00000491104 FLT1P17948 1338 aa12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 CCDC171Q6TFL3 1326 aa12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 FOXP2O15409 715 aa12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 EVX2Q03828 476 aa12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 FMR1Q06787 632 aaKnown RBP eCLIP12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 USP48Q86UV5 1035 aa12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 APOBEC3FQ8IUX4 373 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 ESYT1Q9BSJ8 1104 aa12.92□□□□□ -0.34
CACNA1C-227ENST00000491104 IDI2Q9BXS1 227 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms