RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 AATFQ9NY61 560 aaKnown RBP eCLIP22.37■■□□□ 1.17
MCF2L-230ENST00000491028 FOCADQ5VW36 1801 aa22.36■■□□□ 1.17
MCF2L-230ENST00000491028 H7C1D1 291 aa22.36■■□□□ 1.17
MCF2L-230ENST00000491028 GNAT2P19087 354 aa22.36■■□□□ 1.17
MCF2L-230ENST00000491028 LMOD1P29536 600 aaPredicted RBP22.36■■□□□ 1.17
MCF2L-230ENST00000491028 RBM5P52756 815 aaKnown RBP eCLIP22.36■■□□□ 1.17
MCF2L-230ENST00000491028 DLGAP5Q15398 846 aa22.36■■□□□ 1.17
MCF2L-230ENST00000491028 ZNF589Q86UQ0 364 aaPredicted RBP22.36■■□□□ 1.17
MCF2L-230ENST00000491028 IL25Q9H293 177 aa22.36■■□□□ 1.17
MCF2L-230ENST00000491028 MYOZ2Q9NPC6 264 aa22.36■■□□□ 1.17
MCF2L-230ENST00000491028 CDK5RAP2Q96SN8 1893 aa22.35■■□□□ 1.17
MCF2L-230ENST00000491028 APOBEC3HQ6NTF7 200 aaKnown RBP22.35■■□□□ 1.17
MCF2L-230ENST00000491028 CCDC129Q6ZRS4 1044 aa22.35■■□□□ 1.17
MCF2L-230ENST00000491028 LCORLQ8N3X6 602 aa22.35■■□□□ 1.17
MCF2L-230ENST00000491028 STRBPQ96SI9 672 aaKnown RBP22.35■■□□□ 1.17
MCF2L-230ENST00000491028 ARMT1Q9H993 441 aa22.35■■□□□ 1.17
MCF2L-230ENST00000491028 SPDYE2BA6NHP3 402 aa22.34■■□□□ 1.17
MCF2L-230ENST00000491028 REC8O95072 547 aa22.34■■□□□ 1.17
MCF2L-230ENST00000491028 SPDYE6P0CI01 402 aa22.34■■□□□ 1.17
MCF2L-230ENST00000491028 DYNLL1P63167 89 aaKnown RBP22.34■■□□□ 1.17
MCF2L-230ENST00000491028 ZBED3Q96IU2 234 aaPredicted RBP22.34■■□□□ 1.17
MCF2L-230ENST00000491028 RPAP1Q9BWH6 1393 aaPredicted RBP22.34■■□□□ 1.17
MCF2L-230ENST00000491028 RHBDL3P58872 404 aa22.33■■□□□ 1.17
MCF2L-230ENST00000491028 KIAA1211Q6ZU35 1233 aa22.33■■□□□ 1.17
MCF2L-230ENST00000491028 CRNKL1Q9BZJ0 848 aaKnown RBP22.33■■□□□ 1.17
MCF2L-230ENST00000491028 UTRNP46939 3433 aa22.33■■□□□ 1.16
MCF2L-230ENST00000491028 SHTN1A0MZ66 631 aa22.32■■□□□ 1.16
MCF2L-230ENST00000491028 EPB41L2O43491 1005 aaKnown RBP22.32■■□□□ 1.16
MCF2L-230ENST00000491028 KIF4BQ2VIQ3 1234 aa22.32■■□□□ 1.16
MCF2L-230ENST00000491028 BACH2Q9BYV9 841 aa22.32■■□□□ 1.16
MCF2L-230ENST00000491028 ADARB2Q9NS39 739 aaKnown RBP22.32■■□□□ 1.16
MCF2L-230ENST00000491028 NAV1Q8NEY1 1877 aa22.32■■□□□ 1.16
MCF2L-230ENST00000491028 IQCA1LA6NCM1 817 aa22.31■■□□□ 1.16
MCF2L-230ENST00000491028 MYO1BO43795 1136 aa22.31■■□□□ 1.16
MCF2L-230ENST00000491028 EPS15P42566 896 aa22.31■■□□□ 1.16
MCF2L-230ENST00000491028 CDC42EP5Q6NZY7 148 aa22.31■■□□□ 1.16
MCF2L-230ENST00000491028 TEX11Q8IYF3 940 aa22.31■■□□□ 1.16
MCF2L-230ENST00000491028 SH3RF3Q8TEJ3 882 aaPredicted RBP22.31■■□□□ 1.16
MCF2L-230ENST00000491028 PRMT6Q96LA8 375 aaPredicted RBP22.31■■□□□ 1.16
MCF2L-230ENST00000491028 DSCC1Q9BVC3 393 aa22.31■■□□□ 1.16
MCF2L-230ENST00000491028 ANO2Q9NQ90 1003 aa22.31■■□□□ 1.16
MCF2L-230ENST00000491028 USP40Q9NVE5 1235 aa22.31■■□□□ 1.16
MCF2L-230ENST00000491028 PCDHAC2Q9Y5I4 1007 aa22.31■■□□□ 1.16
MCF2L-230ENST00000491028 PATL2C9JE40 543 aaKnown RBP22.3■■□□□ 1.16
MCF2L-230ENST00000491028 WNT10BO00744 389 aa22.3■■□□□ 1.16
MCF2L-230ENST00000491028 HSPD1P10809 573 aaKnown RBP22.3■■□□□ 1.16
MCF2L-230ENST00000491028 LSG1Q9H089 658 aaKnown RBP22.3■■□□□ 1.16
MCF2L-230ENST00000491028 HACL1Q9UJ83 578 aa22.3■■□□□ 1.16
MCF2L-230ENST00000491028 SLC4A4Q9Y6R1 1079 aa22.3■■□□□ 1.16
MCF2L-230ENST00000491028 DDX60LQ5H9U9 1706 aaKnown RBP22.3■■□□□ 1.16
MCF2L-230ENST00000491028 TBC1D10BQ4KMP7 808 aaPredicted RBP22.29■■□□□ 1.16
MCF2L-230ENST00000491028 GIMAP6Q6P9H5 292 aa22.29■■□□□ 1.16
MCF2L-230ENST00000491028 SAMD7Q7Z3H4 446 aa22.29■■□□□ 1.16
MCF2L-230ENST00000491028 TDRD3Q9H7E2 651 aaKnown RBP22.29■■□□□ 1.16
MCF2L-230ENST00000491028 ATP8A2Q9NTI2 1148 aa22.29■■□□□ 1.16
MCF2L-230ENST00000491028 TMOD2Q9NZR1 351 aa22.29■■□□□ 1.16
MCF2L-230ENST00000491028 ZMYM6O95789 1325 aa22.29■■□□□ 1.16
MCF2L-230ENST00000491028 EGFRP00533 1210 aa22.28■■□□□ 1.16
MCF2L-230ENST00000491028 SPDYE2Q495Y8 402 aa22.28■■□□□ 1.16
MCF2L-230ENST00000491028 VPS53Q5VIR6 699 aa22.28■■□□□ 1.16
MCF2L-230ENST00000491028 DDRGK1Q96HY6 314 aa22.28■■□□□ 1.16
MCF2L-230ENST00000491028 IDI2Q9BXS1 227 aa22.28■■□□□ 1.16
MCF2L-230ENST00000491028 NACAP1Q9BZK3 213 aa22.28■■□□□ 1.16
MCF2L-230ENST00000491028 GSG1L2A8MUP6 293 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 FOXP2O15409 715 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 PRKAB2O43741 272 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 NPM3O75607 178 aaKnown RBP22.27■■□□□ 1.16
MCF2L-230ENST00000491028 USP5P45974 858 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 ALX1Q15699 326 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 NBPF9Q3BBW0 867 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 RBM26Q5T8P6 1007 aaKnown RBP22.27■■□□□ 1.16
MCF2L-230ENST00000491028 FKBP1CQ5VVH2 108 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 TRPM4Q8TD43 1214 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 SDR42E1Q8WUS8 393 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 MAP4K1Q92918 833 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 ZNF70Q9UC06 446 aaPredicted RBP22.27■■□□□ 1.16
MCF2L-230ENST00000491028 LAMB1P07942 1786 aa22.27■■□□□ 1.16
MCF2L-230ENST00000491028 LAMA4Q16363 1823 aa22.27■■□□□ 1.15
MCF2L-230ENST00000491028 WDHD1O75717 1129 aaPredicted RBP22.26■■□□□ 1.15
MCF2L-230ENST00000491028 APPP05067 770 aa22.26■■□□□ 1.15
MCF2L-230ENST00000491028 EPHX2P34913 555 aa22.26■■□□□ 1.15
MCF2L-230ENST00000491028 PTH1RQ03431 593 aa22.26■■□□□ 1.15
MCF2L-230ENST00000491028 USP50Q70EL3 339 aaPredicted RBP22.26■■□□□ 1.15
MCF2L-230ENST00000491028 TGFBRAP1Q8WUH2 860 aa22.26■■□□□ 1.15
MCF2L-230ENST00000491028 EPB41L4AQ9HCS5 686 aaPredicted RBP22.26■■□□□ 1.15
MCF2L-230ENST00000491028 U3KPZ7 1027 aaPredicted RBP22.26■■□□□ 1.15
MCF2L-230ENST00000491028 MYH1P12882 1939 aa22.25■■□□□ 1.15
MCF2L-230ENST00000491028 SEC24BO95487 1268 aa22.25■■□□□ 1.15
MCF2L-230ENST00000491028 IFNL3Q8IZI9 196 aa22.25■■□□□ 1.15
MCF2L-230ENST00000491028 NAPBQ9H115 298 aa22.25■■□□□ 1.15
MCF2L-230ENST00000491028 UPF2Q9HAU5 1272 aaKnown RBP22.25■■□□□ 1.15
MCF2L-230ENST00000491028 DCP1AQ9NPI6 582 aaPredicted RBP22.25■■□□□ 1.15
MCF2L-230ENST00000491028 COL2A1P02458 1487 aaPredicted RBP22.25■■□□□ 1.15
MCF2L-230ENST00000491028 BAZ2AQ9UIF9 1905 aaKnown RBP22.25■■□□□ 1.15
MCF2L-230ENST00000491028 FLT1P17948 1338 aa22.25■■□□□ 1.15
MCF2L-230ENST00000491028 POTECB2RU33 542 aa22.24■■□□□ 1.15
MCF2L-230ENST00000491028 TDO2P48775 406 aa22.24■■□□□ 1.15
MCF2L-230ENST00000491028 ZNF784Q8NCA9 323 aaPredicted RBP22.24■■□□□ 1.15
MCF2L-230ENST00000491028 TAF1DQ9H5J8 278 aaPredicted RBP22.24■■□□□ 1.15
MCF2L-230ENST00000491028 MKRN1Q9UHC7 482 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms