RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 SSH1Q8WYL5 1049 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 USP44Q9H0E7 712 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 CSADQ9Y600 493 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 PTPRCP08575 1304 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 PRDX5P30044 214 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 INPP5BP32019 993 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 NFIAQ12857 509 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 MOGSQ13724 837 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 PUM3Q15397 648 aaKnown RBP10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 DIXDC1Q155Q3 683 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 ATG9AQ7Z3C6 839 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 FAM83AQ86UY5 434 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 VPS37DQ86XT2 251 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 SH3TC2Q8TF17 1288 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 SHISA4Q96DD7 197 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 DAGLAQ9Y4D2 1042 aa10.59□□□□□ -0.71
PCOLCE-209ENST00000490909 TLR2O60603 784 aa10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 LACTBP83111 547 aaPredicted RBP10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 PPIL2Q13356 520 aa10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 SLC9C1Q4G0N8 1177 aa10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 CAVIN4Q5BKX8 364 aa10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 FKBP1CQ5VVH2 108 aa10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 ERO1BQ86YB8 467 aa10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 ZFYVE28Q9HCC9 887 aa10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 DOCK3Q8IZD9 2030 aa10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 FOCADQ5VW36 1801 aa10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 MAST3O60307 1309 aa10.58□□□□□ -0.72
PCOLCE-209ENST00000490909 EYA2O00167 538 aa10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 ECM2O94769 699 aaPredicted RBP10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 MYCP01106 439 aaPredicted RBP10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 FXR1P51114 621 aaKnown RBP eCLIP10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 HHIPL2Q6UWX4 724 aa10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 MIGA2Q7L4E1 593 aa10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 ZCCHC17Q9NP64 241 aaKnown RBP10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 FAM198AQ9UFP1 575 aa10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 MYO5AQ9Y4I1 1855 aaKnown RBP10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 COL6A3P12111 3177 aa10.57□□□□□ -0.72
PCOLCE-209ENST00000490909 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 CT47B1P0C2W7 299 aaPredicted RBP10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 SLURP2P0DP57 97 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 CETPP11597 493 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 SLFN5Q08AF3 891 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 SNAPC2Q13487 334 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 CDC42EP5Q6NZY7 148 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 C17orf99Q6UX52 265 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 TRMT2AQ8IZ69 625 aaKnown RBP10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 GCC1Q96CN9 775 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 TRIM47Q96LD4 638 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 MRIQ9BWK5 157 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 TMOD2Q9NZR1 351 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 KCNH4Q9UQ05 1017 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 SUGT1Q9Y2Z0 365 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 PLXNB2O15031 1838 aa10.56□□□□□ -0.72
PCOLCE-209ENST00000490909 IFIT1P09914 478 aaKnown RBP10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 SLC5A1P13866 664 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 PHKA1P46020 1223 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 TCP10Q12799 353 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 MTFR1Q15390 333 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 NOL9Q5SY16 702 aaKnown RBP10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 DCAF15Q66K64 600 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 ZFPM1Q8IX07 1006 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 FAM151AQ8WW52 585 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 LPIN2Q92539 896 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 ZNF341Q9BYN7 854 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 SIL1Q9H173 461 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 CPA4Q9UI42 421 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 ZNF112Q9UJU3 913 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 SALL1Q9NSC2 1324 aa10.55□□□□□ -0.72
PCOLCE-209ENST00000490909 OSBPP22059 807 aa10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 ADORA1P30542 326 aa10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 PPATQ06203 517 aa10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 ATP2B3Q16720 1220 aa10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 SH3BP5LQ7L8J4 393 aa10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 ANKRD23Q86SG2 305 aa10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 CDCA7LQ96GN5 454 aa10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 PA2G4Q9UQ80 394 aaKnown RBP10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 GAKO14976 1311 aa10.54□□□□□ -0.72
PCOLCE-209ENST00000490909 PDHXO00330 501 aa10.53□□□□□ -0.72
PCOLCE-209ENST00000490909 BCRP11274 1271 aa10.53□□□□□ -0.72
PCOLCE-209ENST00000490909 RASGRF1Q13972 1273 aa10.53□□□□□ -0.72
PCOLCE-209ENST00000490909 GPAT2Q6NUI2 795 aa10.53□□□□□ -0.72
PCOLCE-209ENST00000490909 UBE2Q1Q7Z7E8 422 aa10.53□□□□□ -0.72
PCOLCE-209ENST00000490909 WDR66Q8TBY9 1149 aa10.53□□□□□ -0.72
PCOLCE-209ENST00000490909 ZNF384Q8TF68 577 aa10.53□□□□□ -0.72
PCOLCE-209ENST00000490909 DDX4Q9NQI0 724 aaKnown RBP10.53□□□□□ -0.72
PCOLCE-209ENST00000490909 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
PCOLCE-209ENST00000490909 FRMPD3Q5JV73 1810 aa10.53□□□□□ -0.72
PCOLCE-209ENST00000490909 PHF20L1A8MW92 1017 aa10.52□□□□□ -0.73
PCOLCE-209ENST00000490909 H0YGN5 161 aa10.52□□□□□ -0.73
PCOLCE-209ENST00000490909 CIAO1O76071 339 aa10.52□□□□□ -0.73
PCOLCE-209ENST00000490909 CYP2C8P10632 490 aa10.52□□□□□ -0.73
PCOLCE-209ENST00000490909 PRKCZQ05513 592 aa10.52□□□□□ -0.73
PCOLCE-209ENST00000490909 SLC4A8Q2Y0W8 1093 aa10.52□□□□□ -0.73
PCOLCE-209ENST00000490909 HOOK2Q96ED9 719 aa10.52□□□□□ -0.73
PCOLCE-209ENST00000490909 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
PCOLCE-209ENST00000490909 SMC4Q9NTJ3 1288 aa10.52□□□□□ -0.73
PCOLCE-209ENST00000490909 SRRDQ9UH36 339 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms