RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 POSTNQ15063 836 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 SARM1Q6SZW1 724 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 FUCA2Q9BTY2 467 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 VWA3AA6NCI4 1184 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 TMEM232C9JQI7 657 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 KRT9P35527 623 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 RAD51AP2Q09MP3 1159 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 RGS22Q8NE09 1264 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 EEF2KMTQ96G04 330 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 FAN1Q9Y2M0 1017 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 RRP15Q9Y3B9 282 aaKnown RBP14.57□□□□□ -0.08
SHOX2-205ENST00000490689 METP08581 1390 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 NEURL1BA8MQ27 555 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 GPAA1O43292 621 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 ATF3P18847 181 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 CMA1P23946 247 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 E4F1Q66K89 784 aaPredicted RBP14.56□□□□□ -0.08
SHOX2-205ENST00000490689 AMOTL1Q8IY63 956 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 GRAMD1CQ8IYS0 662 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 METTL22Q9BUU2 404 aaPredicted RBP14.56□□□□□ -0.08
SHOX2-205ENST00000490689 TAB2Q9NYJ8 693 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 RTEL1Q9NZ71 1219 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 ANGEL1Q9UNK9 670 aaKnown RBP14.56□□□□□ -0.08
SHOX2-205ENST00000490689 CPSF1Q10570 1443 aaKnown RBP14.56□□□□□ -0.08
SHOX2-205ENST00000490689 UHRF1BP1LA0JNW5 1464 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 ZMYND10O75800 440 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 UBA7P41226 1012 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 RBM6P78332 1123 aaKnown RBP14.56□□□□□ -0.08
SHOX2-205ENST00000490689 CCZ1BP86790 482 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 CCZ1P86791 482 aaPredicted RBP14.56□□□□□ -0.08
SHOX2-205ENST00000490689 ZNF174Q15697 407 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 ARMCX5Q6P1M9 558 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 ZNF790Q6PG37 636 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 CNGA4Q8IV77 575 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 TRMT112Q9UI30 125 aaKnown RBP14.56□□□□□ -0.08
SHOX2-205ENST00000490689 CTNND2Q9UQB3 1225 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 CTCFLQ8NI51 663 aaPredicted RBP14.56□□□□□ -0.08
SHOX2-205ENST00000490689 FAM76AQ8TAV0 307 aa14.56□□□□□ -0.08
SHOX2-205ENST00000490689 IDEP14735 1019 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 IFNL2Q8IZJ0 200 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 LUC7L2Q9Y383 392 aaKnown RBP14.55□□□□□ -0.08
SHOX2-205ENST00000490689 HOXB7P09629 217 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 ERCC3P19447 782 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 ST5P78524 1137 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 DHX40Q8IX18 779 aaKnown RBP14.55□□□□□ -0.08
SHOX2-205ENST00000490689 MIGA1Q8NAN2 632 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 ZNF274Q96GC6 653 aaPredicted RBP14.55□□□□□ -0.08
SHOX2-205ENST00000490689 ADAM21Q9UKJ8 722 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 ARHGEF10O15013 1369 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 IFT81Q8WYA0 676 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 IP6K1Q92551 441 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 TAF4BQ92750 862 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 ZNF496Q96IT1 587 aaPredicted RBP14.55□□□□□ -0.08
SHOX2-205ENST00000490689 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.55□□□□□ -0.08
SHOX2-205ENST00000490689 CARMIL3Q8ND23 1372 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 CUTAO60888 179 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 KRT18P05783 430 aaKnown RBP14.55□□□□□ -0.08
SHOX2-205ENST00000490689 CCDC178Q5BJE1 867 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 MLKLQ8NB16 471 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 RABGGTAQ92696 567 aa14.55□□□□□ -0.08
SHOX2-205ENST00000490689 TULP4Q9NRJ4 1543 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 MYO1CO00159 1063 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 CEP57Q86XR8 500 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 OTUD6BQ8N6M0 293 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 CCDC113Q9H0I3 377 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 BTBD18B2RXH4 712 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 HSF2BPO75031 334 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 FGAP02671 866 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 LIG3P49916 1009 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 BRD3Q15059 726 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 IQCA1Q86XH1 822 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 GOLGA5Q8TBA6 731 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 BABAM1Q9NWV8 329 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 RNASE9P60153 205 aaKnown RBP14.54□□□□□ -0.08
SHOX2-205ENST00000490689 SPHKAPQ2M3C7 1700 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 TTC19Q6DKK2 380 aaPredicted RBP14.54□□□□□ -0.08
SHOX2-205ENST00000490689 CATIPQ7Z7H3 387 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
SHOX2-205ENST00000490689 A0A1W2PQ27 194 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 A0A1W2PQ64 194 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 A0A1W2PQD8 194 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 PLEKHG3A1L390 1219 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 EYA2O00167 538 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 ENC1O14682 589 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 TRIM66O15016 1216 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 KRT86O43790 486 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 CYLC1P35663 651 aaPredicted RBP14.53□□□□□ -0.08
SHOX2-205ENST00000490689 ZAP70P43403 619 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 CKAP4Q07065 602 aaKnown RBP14.53□□□□□ -0.08
SHOX2-205ENST00000490689 KIF5AQ12840 1032 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 E2F4Q16254 413 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 SAMD1Q6SPF0 538 aaPredicted RBP14.53□□□□□ -0.08
SHOX2-205ENST00000490689 IRX2Q9BZI1 471 aaPredicted RBP14.53□□□□□ -0.08
SHOX2-205ENST00000490689 BLZF1Q9H2G9 400 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 LUC7LQ9NQ29 371 aaKnown RBP14.53□□□□□ -0.08
SHOX2-205ENST00000490689 PRDM11Q9NQV5 511 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 SYNRGQ9UMZ2 1314 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 ANKRD18BA2A2Z9 1011 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 SOWAHDA6NJG2 315 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 MCM7P33993 719 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms