RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 PUS3Q9BZE2 481 aaKnown RBP9.29□□□□□ -0.92
PRPF4B-208ENST00000490653 ZNF408Q9H9D4 720 aa9.29□□□□□ -0.92
PRPF4B-208ENST00000490653 CHMP3Q9Y3E7 222 aa9.29□□□□□ -0.92
PRPF4B-208ENST00000490653 MYH3P11055 1940 aa9.29□□□□□ -0.92
PRPF4B-208ENST00000490653 ANKRD18BA2A2Z9 1011 aa9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 ADM5C9JUS6 153 aa9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 GRM8O00222 908 aa9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 TLL1O43897 1013 aa9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 PLIN1O60240 522 aa9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 IGHMBP2P38935 993 aaKnown RBP9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 DGKZQ13574 1117 aa9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 RSBN1LQ6PCB5 846 aaPredicted RBP9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 ADGRG1Q9Y653 693 aa9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 ZNF804BA4D1E1 1349 aa9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 IRS2Q9Y4H2 1338 aa9.28□□□□□ -0.92
PRPF4B-208ENST00000490653 USP17L3A6NCW0 530 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 USP17L4A6NCW7 530 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 E9PSI1 815 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 ACTN4O43707 911 aaKnown RBP9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 SCARF1Q14162 830 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 DACT2Q5SW24 774 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 PRAMEF18Q5VWM3 479 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 SPRYD7Q5W111 196 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 CDC37L1Q7L3B6 337 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 USP17L1Q7RTZ2 530 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 ANKLE1Q8NAG6 615 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 ZC3H15Q8WU90 426 aaKnown RBP9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 MPHOSPH8Q99549 860 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 SRCIN1Q9C0H9 1055 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 C9orf78Q9NZ63 289 aaPredicted RBP9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 LEMD3Q9Y2U8 911 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 TRPM7Q96QT4 1865 aa9.27□□□□□ -0.93
PRPF4B-208ENST00000490653 CASP8AP2Q9UKL3 1982 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 ALDH1L1O75891 902 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 RPS12P25398 132 aaKnown RBP9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 SOX10P56693 466 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 ZNF280AP59817 542 aaPredicted RBP9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 GTF2IP78347 998 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 IFIT5Q13325 482 aaKnown RBP9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 KIF4BQ2VIQ3 1234 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 NBPF9Q3BBW0 867 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 KMT5BQ4FZB7 885 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 PODNQ7Z5L7 613 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 AGBL3Q8NEM8 1001 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 CD209Q9NNX6 404 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 JAG2Q9Y219 1238 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 PCDHAC2Q9Y5I4 1007 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 HTTP42858 3142 aa9.26□□□□□ -0.93
PRPF4B-208ENST00000490653 MED23Q9ULK4 1368 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 CCER2I3L3R5 266 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 HUNKP57058 714 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 PRR20EP86478 221 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 PRR20CP86479 221 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 PRR20DP86480 221 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 PRR20BP86481 221 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 PRR20AP86496 221 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 KIF23Q02241 960 aaPredicted RBP9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 LRRC24Q50LG9 513 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 ANGEL2Q5VTE6 544 aaKnown RBP9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 TTLL5Q6EMB2 1281 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 MOB2Q70IA6 237 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 KRT26Q7Z3Y9 468 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 ZNF598Q86UK7 904 aaKnown RBP9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 ANKRD44Q8N8A2 993 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 KLHDC4Q8TBB5 520 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 CSRNP1Q96S65 589 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 ANKRD2Q9GZV1 360 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 COA1Q9GZY4 146 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 USP44Q9H0E7 712 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 BICC1Q9H694 974 aaKnown RBP9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 RNF186Q9NXI6 227 aa9.25□□□□□ -0.93
PRPF4B-208ENST00000490653 MKI67P46013 3256 aaKnown RBP9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 RCCD1A6NED2 376 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 CA12O43570 354 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 USP17L8P0C7I0 530 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 CCDC57Q2TAC2 916 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 LDHAL6AQ6ZMR3 332 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 CERS5Q8N5B7 392 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 KCNV2Q8TDN2 545 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 ZNF775Q96BV0 537 aaPredicted RBP9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 DCPSQ96C86 337 aaKnown RBP9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 BEGAINQ9BUH8 593 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 MYOZ2Q9NPC6 264 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 GGA3Q9NZ52 723 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 NOB1Q9ULX3 412 aaKnown RBP9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 TNNQ9UQP3 1299 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 UTYO14607 1347 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 AOX1Q06278 1338 aa9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 ZNF646O15015 1829 aaPredicted RBP9.24□□□□□ -0.93
PRPF4B-208ENST00000490653 DGAT1O75907 488 aa9.23□□□□□ -0.93
PRPF4B-208ENST00000490653 S1PR4O95977 384 aa9.23□□□□□ -0.93
PRPF4B-208ENST00000490653 CFHP08603 1231 aa9.23□□□□□ -0.93
PRPF4B-208ENST00000490653 SLC10A3P09131 477 aa9.23□□□□□ -0.93
PRPF4B-208ENST00000490653 KCNJ4P48050 445 aa9.23□□□□□ -0.93
PRPF4B-208ENST00000490653 NOGQ13253 232 aa9.23□□□□□ -0.93
PRPF4B-208ENST00000490653 STRIP1Q5VSL9 837 aa9.23□□□□□ -0.93
PRPF4B-208ENST00000490653 RGMBQ6NW40 437 aa9.23□□□□□ -0.93
PRPF4B-208ENST00000490653 KIAA0825Q8IV33 1275 aa9.23□□□□□ -0.93
PRPF4B-208ENST00000490653 CDCA5Q96FF9 252 aa9.23□□□□□ -0.93
PRPF4B-208ENST00000490653 CNNM1Q9NRU3 951 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms