RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 SEC62Q99442 399 aaKnown RBP16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 TSG101Q99816 390 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 HAUS7Q99871 368 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 BIN1O00499 593 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 BTDP43251 543 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 ZNF526Q8TF50 670 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 ARID3AQ99856 593 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 LUC7LQ9NQ29 371 aaKnown RBP16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 SEC24BO95487 1268 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 IGKV5-2P06315 115 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 PTPN12Q05209 780 aaKnown RBP16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 DCAF15Q66K64 600 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 SMIM5Q71RC9 77 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 SPATA31A5Q5VU36 1347 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 SPATA31A7Q8IWB4 1347 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 CLRN2A0PK11 232 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 SP4Q02446 784 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 TBC1D9BQ66K14 1250 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 RBM28Q9NW13 759 aaKnown RBP16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 SEPT11Q9NVA2 429 aaKnown RBP16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 V9GY48 417 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 DLC1Q96QB1 1528 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 CBFA2T2O43439 604 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 FAM47AQ5JRC9 791 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 GPR108Q9NPR9 543 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 PNPLA6Q8IY17 1366 aa16.48■□□□□ 0.23
ARHGEF39-205ENST00000490638 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 SMCR8Q8TEV9 937 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 BARGINQ6ZT62 677 aa16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 DDX19AQ9NUU7 478 aaKnown RBP16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 RTKN2Q8IZC4 609 aa16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 PYM1Q9BRP8 204 aaKnown RBP16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 SEMA3EO15041 775 aa16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 CTAGE5O15320 804 aa16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 TBCAO75347 108 aaKnown RBP16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 NFIXQ14938 502 aa16.47■□□□□ 0.23
ARHGEF39-205ENST00000490638 R3HDM1Q15032 1099 aaKnown RBP16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 NSMFQ6X4W1 530 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 SYCP3Q8IZU3 236 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 MYL10Q9BUA6 226 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 A0A0D9SFI3 127 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 NBPF26B4DH59 902 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 NBPF10Q6P3W6 841 aaKnown RBP16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 STXBP4Q6ZWJ1 553 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 IFNL3Q8IZI9 196 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 NBPF15Q8N660 670 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 KCNG4Q8TDN1 519 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 SSH2Q76I76 1423 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 PPARAQ07869 468 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 CCDC173Q0VFZ6 552 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 CCDC183Q5T5S1 534 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 TAOK3Q9H2K8 898 aa16.46■□□□□ 0.23
ARHGEF39-205ENST00000490638 SYKP43405 635 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 TCERG1LQ5VWI1 586 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 DSCC1Q9BVC3 393 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 NCOA5Q9HCD5 579 aaKnown RBP16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 BSDC1Q9NW68 430 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 TLR7Q9NYK1 1049 aaKnown RBP16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 SNX14Q9Y5W7 946 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 GOLGA6L1Q8N7Z2 621 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 SPON1Q9HCB6 807 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 LAMC1P11047 1609 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 SNAP23O00161 211 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 BACH1O14867 736 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 KRT2P35908 639 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 FGFR1OPO95684 399 aaKnown RBP16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 PI16Q6UXB8 463 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 SPATA31D1Q6ZQQ2 1576 aa16.45■□□□□ 0.22
ARHGEF39-205ENST00000490638 ZC3H13Q5T200 1668 aaKnown RBP16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 UBE3CQ15386 1083 aa16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 KRT79Q5XKE5 535 aa16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 CIAPIN1Q6FI81 312 aa16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 QRICH2Q9H0J4 1663 aa16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 TECPR2O15040 1411 aa16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 ISM2Q6H9L7 571 aa16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 LRRC27Q9C0I9 530 aa16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 MNS1Q8NEH6 495 aa16.44■□□□□ 0.22
ARHGEF39-205ENST00000490638 TRIM21P19474 475 aaKnown RBP16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 EPHA10Q5JZY3 1008 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 NCOA3Q9Y6Q9 1424 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 LETM2Q2VYF4 491 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 SNX21Q969T3 373 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 DIP2AQ14689 1571 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 ZBED4O75132 1171 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 FGAP02671 866 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 STAT6P42226 847 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 AFMP43652 599 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 TMEM87AQ8NBN3 555 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 HSPD1P10809 573 aaKnown RBP16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 MCM7P33993 719 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms