RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 NACAP1Q9BZK3 213 aa15.86■□□□□ 0.13
SNX12-205ENST00000490561 AATFQ9NY61 560 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNX12-205ENST00000490561 CHGBP05060 677 aa15.85■□□□□ 0.13
SNX12-205ENST00000490561 MCCP23508 829 aa15.85■□□□□ 0.13
SNX12-205ENST00000490561 DLGAP5Q15398 846 aa15.85■□□□□ 0.13
SNX12-205ENST00000490561 CFAP100Q494V2 611 aa15.85■□□□□ 0.13
SNX12-205ENST00000490561 SLFNL1Q499Z3 407 aa15.85■□□□□ 0.13
SNX12-205ENST00000490561 GIMAP6Q6P9H5 292 aa15.85■□□□□ 0.13
SNX12-205ENST00000490561 LCORLQ8N3X6 602 aa15.85■□□□□ 0.13
SNX12-205ENST00000490561 ARMT1Q9H993 441 aa15.85■□□□□ 0.13
SNX12-205ENST00000490561 CNOT7Q9UIV1 285 aaKnown RBP15.85■□□□□ 0.13
SNX12-205ENST00000490561 MYH2Q9UKX2 1941 aa15.85■□□□□ 0.13
SNX12-205ENST00000490561 ZMYM6O95789 1325 aa15.85■□□□□ 0.13
SNX12-205ENST00000490561 PATL2C9JE40 543 aaKnown RBP15.84■□□□□ 0.13
SNX12-205ENST00000490561 MYO1BO43795 1136 aa15.84■□□□□ 0.13
SNX12-205ENST00000490561 CCDC129Q6ZRS4 1044 aa15.84■□□□□ 0.13
SNX12-205ENST00000490561 MICALL2Q8IY33 904 aa15.84■□□□□ 0.13
SNX12-205ENST00000490561 L3MBTL3Q96JM7 780 aaPredicted RBP15.84■□□□□ 0.13
SNX12-205ENST00000490561 LSG1Q9H089 658 aaKnown RBP15.84■□□□□ 0.13
SNX12-205ENST00000490561 MYOZ2Q9NPC6 264 aa15.84■□□□□ 0.13
SNX12-205ENST00000490561 ATP8A2Q9NTI2 1148 aa15.84■□□□□ 0.13
SNX12-205ENST00000490561 GPRC5DQ9NZD1 345 aa15.84■□□□□ 0.13
SNX12-205ENST00000490561 TMOD2Q9NZR1 351 aa15.84■□□□□ 0.13
SNX12-205ENST00000490561 CTNNA3Q9UI47 895 aa15.84■□□□□ 0.13
SNX12-205ENST00000490561 SLC4A4Q9Y6R1 1079 aa15.84■□□□□ 0.13
SNX12-205ENST00000490561 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
SNX12-205ENST00000490561 GLTPD2A6NH11 291 aa15.83■□□□□ 0.12
SNX12-205ENST00000490561 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
SNX12-205ENST00000490561 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
SNX12-205ENST00000490561 HSPD1P10809 573 aaKnown RBP15.83■□□□□ 0.12
SNX12-205ENST00000490561 DYNLL1P63167 89 aaKnown RBP15.83■□□□□ 0.12
SNX12-205ENST00000490561 ALX1Q15699 326 aa15.83■□□□□ 0.12
SNX12-205ENST00000490561 APOBEC3HQ6NTF7 200 aaKnown RBP15.83■□□□□ 0.12
SNX12-205ENST00000490561 TEX11Q8IYF3 940 aa15.83■□□□□ 0.12
SNX12-205ENST00000490561 MAP4K1Q92918 833 aa15.83■□□□□ 0.12
SNX12-205ENST00000490561 IL25Q9H293 177 aa15.83■□□□□ 0.12
SNX12-205ENST00000490561 NPM3O75607 178 aaKnown RBP15.82■□□□□ 0.12
SNX12-205ENST00000490561 APPP05067 770 aa15.82■□□□□ 0.12
SNX12-205ENST00000490561 AMOTL1Q8IY63 956 aa15.82■□□□□ 0.12
SNX12-205ENST00000490561 ZBED3Q96IU2 234 aaPredicted RBP15.82■□□□□ 0.12
SNX12-205ENST00000490561 USP26Q9BXU7 913 aa15.82■□□□□ 0.12
SNX12-205ENST00000490561 USP40Q9NVE5 1235 aa15.82■□□□□ 0.12
SNX12-205ENST00000490561 IQCA1LA6NCM1 817 aa15.81■□□□□ 0.12
SNX12-205ENST00000490561 DDNO94850 711 aaPredicted RBP15.81■□□□□ 0.12
SNX12-205ENST00000490561 USP5P45974 858 aa15.81■□□□□ 0.12
SNX12-205ENST00000490561 RHBDL3P58872 404 aa15.81■□□□□ 0.12
SNX12-205ENST00000490561 RNF20Q5VTR2 975 aa15.81■□□□□ 0.12
SNX12-205ENST00000490561 FKBP1CQ5VVH2 108 aa15.81■□□□□ 0.12
SNX12-205ENST00000490561 CDC42EP5Q6NZY7 148 aa15.81■□□□□ 0.12
SNX12-205ENST00000490561 SH3RF3Q8TEJ3 882 aaPredicted RBP15.81■□□□□ 0.12
SNX12-205ENST00000490561 NAPBQ9H115 298 aa15.81■□□□□ 0.12
SNX12-205ENST00000490561 GSG1L2A8MUP6 293 aa15.8■□□□□ 0.12
SNX12-205ENST00000490561 SEC24BO95487 1268 aa15.8■□□□□ 0.12
SNX12-205ENST00000490561 TDO2P48775 406 aa15.8■□□□□ 0.12
SNX12-205ENST00000490561 KIF4BQ2VIQ3 1234 aa15.8■□□□□ 0.12
SNX12-205ENST00000490561 IFNL3Q8IZI9 196 aa15.8■□□□□ 0.12
SNX12-205ENST00000490561 IDI2Q9BXS1 227 aa15.8■□□□□ 0.12
SNX12-205ENST00000490561 ADARB2Q9NS39 739 aaKnown RBP15.8■□□□□ 0.12
SNX12-205ENST00000490561 ARPP21Q9UBL0 812 aaPredicted RBP15.8■□□□□ 0.12
SNX12-205ENST00000490561 HACL1Q9UJ83 578 aa15.8■□□□□ 0.12
SNX12-205ENST00000490561 RBM8AQ9Y5S9 174 aaKnown RBP15.8■□□□□ 0.12
SNX12-205ENST00000490561 PTH1RQ03431 593 aa15.79■□□□□ 0.12
SNX12-205ENST00000490561 IMMTQ16891 758 aaKnown RBP15.79■□□□□ 0.12
SNX12-205ENST00000490561 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
SNX12-205ENST00000490561 VPS53Q5VIR6 699 aa15.79■□□□□ 0.12
SNX12-205ENST00000490561 PRMT6Q96LA8 375 aaPredicted RBP15.79■□□□□ 0.12
SNX12-205ENST00000490561 TAOK2Q9UL54 1235 aa15.79■□□□□ 0.12
SNX12-205ENST00000490561 WNT10BO00744 389 aa15.78■□□□□ 0.12
SNX12-205ENST00000490561 PRKAB2O43741 272 aa15.78■□□□□ 0.12
SNX12-205ENST00000490561 ENTPD3O75355 529 aa15.78■□□□□ 0.12
SNX12-205ENST00000490561 FGAP02671 866 aa15.78■□□□□ 0.12
SNX12-205ENST00000490561 ZKSCAN1P17029 563 aaPredicted RBP15.78■□□□□ 0.12
SNX12-205ENST00000490561 TNNI2P48788 182 aa15.78■□□□□ 0.12
SNX12-205ENST00000490561 ANAPC15P60006 121 aa15.78■□□□□ 0.12
SNX12-205ENST00000490561 TNFAIP1Q13829 316 aa15.78■□□□□ 0.12
SNX12-205ENST00000490561 USP50Q70EL3 339 aaPredicted RBP15.78■□□□□ 0.12
SNX12-205ENST00000490561 TGFBRAP1Q8WUH2 860 aa15.78■□□□□ 0.12
SNX12-205ENST00000490561 SDR42E1Q8WUS8 393 aa15.78■□□□□ 0.12
SNX12-205ENST00000490561 C22orf23Q9BZE7 217 aa15.78■□□□□ 0.12
SNX12-205ENST00000490561 DCP1AQ9NPI6 582 aaPredicted RBP15.78■□□□□ 0.12
SNX12-205ENST00000490561 COL2A1P02458 1487 aaPredicted RBP15.78■□□□□ 0.12
SNX12-205ENST00000490561 WDR90Q96KV7 1748 aa15.77■□□□□ 0.12
SNX12-205ENST00000490561 FLT1P17948 1338 aa15.77■□□□□ 0.12
SNX12-205ENST00000490561 GOLGB1Q14789 3259 aaKnown RBP15.77■□□□□ 0.12
SNX12-205ENST00000490561 FOXP2O15409 715 aa15.77■□□□□ 0.12
SNX12-205ENST00000490561 WDHD1O75717 1129 aaPredicted RBP15.77■□□□□ 0.12
SNX12-205ENST00000490561 SLC3A2P08195 630 aaKnown RBP15.77■□□□□ 0.12
SNX12-205ENST00000490561 HSPA4P34932 840 aa15.77■□□□□ 0.12
SNX12-205ENST00000490561 TBC1D10BQ4KMP7 808 aaPredicted RBP15.77■□□□□ 0.12
SNX12-205ENST00000490561 SBK1Q52WX2 424 aa15.77■□□□□ 0.12
SNX12-205ENST00000490561 TDRD3Q9H7E2 651 aaKnown RBP15.77■□□□□ 0.12
SNX12-205ENST00000490561 EPB41L4AQ9HCS5 686 aaPredicted RBP15.77■□□□□ 0.12
SNX12-205ENST00000490561 ZNF70Q9UC06 446 aaPredicted RBP15.77■□□□□ 0.12
SNX12-205ENST00000490561 MKRN1Q9UHC7 482 aaKnown RBP15.77■□□□□ 0.12
SNX12-205ENST00000490561 ADAMTSL1Q8N6G6 1762 aa15.77■□□□□ 0.11
SNX12-205ENST00000490561 SCN4AP35499 1836 aa15.76■□□□□ 0.11
SNX12-205ENST00000490561 ZNF213O14771 459 aa15.76■□□□□ 0.11
SNX12-205ENST00000490561 EPS15P42566 896 aa15.76■□□□□ 0.11
SNX12-205ENST00000490561 RBM25P49756 843 aaKnown RBP15.76■□□□□ 0.11
SNX12-205ENST00000490561 NT5C2P49902 561 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms