RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PRUNE2Q8WUY3 3088 aa17.57■□□□□ 0.4
EXOSC3-207ENST00000490516 POTEB2H3BUK9 544 aa17.57■□□□□ 0.4
EXOSC3-207ENST00000490516 CSF1RP07333 972 aa17.57■□□□□ 0.4
EXOSC3-207ENST00000490516 GRIK5Q16478 980 aa17.57■□□□□ 0.4
EXOSC3-207ENST00000490516 PARK7Q99497 189 aaKnown RBP17.57■□□□□ 0.4
EXOSC3-207ENST00000490516 PLA2G12BQ9BX93 195 aa17.57■□□□□ 0.4
EXOSC3-207ENST00000490516 TAOK2Q9UL54 1235 aa17.57■□□□□ 0.4
EXOSC3-207ENST00000490516 KCNH4Q9UQ05 1017 aa17.57■□□□□ 0.4
EXOSC3-207ENST00000490516 AK9Q5TCS8 1911 aa17.57■□□□□ 0.4
EXOSC3-207ENST00000490516 NEXNQ0ZGT2 675 aa17.56■□□□□ 0.4
EXOSC3-207ENST00000490516 GPAT2Q6NUI2 795 aa17.56■□□□□ 0.4
EXOSC3-207ENST00000490516 MIGA2Q7L4E1 593 aa17.56■□□□□ 0.4
EXOSC3-207ENST00000490516 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.56■□□□□ 0.4
EXOSC3-207ENST00000490516 ANKRD18BA2A2Z9 1011 aa17.55■□□□□ 0.4
EXOSC3-207ENST00000490516 PLIN1O60240 522 aa17.55■□□□□ 0.4
EXOSC3-207ENST00000490516 IRF5Q13568 498 aa17.55■□□□□ 0.4
EXOSC3-207ENST00000490516 FAM109BQ6ICB4 259 aaPredicted RBP17.55■□□□□ 0.4
EXOSC3-207ENST00000490516 TDRD7Q8NHU6 1098 aaKnown RBP17.55■□□□□ 0.4
EXOSC3-207ENST00000490516 RAPGEFL1Q9UHV5 662 aa17.55■□□□□ 0.4
EXOSC3-207ENST00000490516 TNPO2O14787 897 aaKnown RBP17.54■□□□□ 0.4
EXOSC3-207ENST00000490516 CASP7P55210 303 aa17.54■□□□□ 0.4
EXOSC3-207ENST00000490516 ANKLE1Q8NAG6 615 aa17.54■□□□□ 0.4
EXOSC3-207ENST00000490516 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
EXOSC3-207ENST00000490516 ZNF341Q9BYN7 854 aa17.54■□□□□ 0.4
EXOSC3-207ENST00000490516 NBPF3Q9H094 633 aa17.54■□□□□ 0.4
EXOSC3-207ENST00000490516 ZNF853P0CG23 659 aa17.53■□□□□ 0.4
EXOSC3-207ENST00000490516 GYG1P46976 350 aa17.53■□□□□ 0.4
EXOSC3-207ENST00000490516 DCAF15Q66K64 600 aa17.53■□□□□ 0.4
EXOSC3-207ENST00000490516 HOOK2Q96ED9 719 aa17.53■□□□□ 0.4
EXOSC3-207ENST00000490516 C11orf49Q9H6J7 331 aa17.53■□□□□ 0.4
EXOSC3-207ENST00000490516 COL2A1P02458 1487 aaPredicted RBP17.52■□□□□ 0.4
EXOSC3-207ENST00000490516 TTC28Q96AY4 2481 aa17.52■□□□□ 0.4
EXOSC3-207ENST00000490516 GCKRQ14397 625 aa17.52■□□□□ 0.4
EXOSC3-207ENST00000490516 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.4
EXOSC3-207ENST00000490516 FAM83AQ86UY5 434 aa17.52■□□□□ 0.4
EXOSC3-207ENST00000490516 MDM2Q00987 491 aaPredicted RBP17.51■□□□□ 0.39
EXOSC3-207ENST00000490516 MAFAQ8NHW3 353 aaPredicted RBP17.51■□□□□ 0.39
EXOSC3-207ENST00000490516 RUNDC1Q96C34 613 aa17.51■□□□□ 0.39
EXOSC3-207ENST00000490516 PTPRFP10586 1907 aa17.51■□□□□ 0.39
EXOSC3-207ENST00000490516 TMOD2Q9NZR1 351 aa17.5■□□□□ 0.39
EXOSC3-207ENST00000490516 PFASO15067 1338 aa17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 HIBADHP31937 336 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 TRIM32Q13049 653 aa17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 IFIT5Q13325 482 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 TEKT1Q969V4 418 aa17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 ZNF594Q96JF6 807 aaPredicted RBP17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 FAM84BQ96KN1 310 aaPredicted RBP17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 CDX2Q99626 313 aaPredicted RBP17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 ZNF112Q9UJU3 913 aa17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 IQSEC3Q9UPP2 1182 aaPredicted RBP17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 CHMP3Q9Y3E7 222 aa17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 RPAP1Q9BWH6 1393 aaPredicted RBP17.49■□□□□ 0.39
EXOSC3-207ENST00000490516 MUC3AQ02505 3323 aa17.48■□□□□ 0.39
EXOSC3-207ENST00000490516 HDLBPQ00341 1268 aaKnown RBP17.48■□□□□ 0.39
EXOSC3-207ENST00000490516 ZNF697Q5TEC3 545 aa17.48■□□□□ 0.39
EXOSC3-207ENST00000490516 G2E3Q7L622 706 aa17.48■□□□□ 0.39
EXOSC3-207ENST00000490516 CXCL11O14625 94 aa17.47■□□□□ 0.39
EXOSC3-207ENST00000490516 FOXO4P98177 505 aa17.47■□□□□ 0.39
EXOSC3-207ENST00000490516 CHAF1AQ13111 956 aaPredicted RBP17.47■□□□□ 0.39
EXOSC3-207ENST00000490516 FKBP1CQ5VVH2 108 aa17.47■□□□□ 0.39
EXOSC3-207ENST00000490516 APOBEC3HQ6NTF7 200 aaKnown RBP17.47■□□□□ 0.39
EXOSC3-207ENST00000490516 TSPYL6Q8N831 410 aa17.47■□□□□ 0.39
EXOSC3-207ENST00000490516 COA7Q96BR5 231 aa17.47■□□□□ 0.39
EXOSC3-207ENST00000490516 ZDHHC15Q96MV8 337 aa17.47■□□□□ 0.39
EXOSC3-207ENST00000490516 IFT57Q9NWB7 429 aa17.47■□□□□ 0.39
EXOSC3-207ENST00000490516 HMGCRP04035 888 aa17.46■□□□□ 0.39
EXOSC3-207ENST00000490516 NOL9Q5SY16 702 aaKnown RBP17.46■□□□□ 0.39
EXOSC3-207ENST00000490516 LDHAL6AQ6ZMR3 332 aa17.46■□□□□ 0.39
EXOSC3-207ENST00000490516 GADL1Q6ZQY3 521 aa17.46■□□□□ 0.39
EXOSC3-207ENST00000490516 HMX1Q9NP08 348 aaPredicted RBP17.46■□□□□ 0.39
EXOSC3-207ENST00000490516 PLXNB2O15031 1838 aa17.46■□□□□ 0.39
EXOSC3-207ENST00000490516 PHIPQ8WWQ0 1821 aa17.45■□□□□ 0.38
EXOSC3-207ENST00000490516 A0A0G2JLL6 359 aaPredicted RBP17.45■□□□□ 0.38
EXOSC3-207ENST00000490516 GNAI1P63096 354 aa17.45■□□□□ 0.38
EXOSC3-207ENST00000490516 PRRT2Q7Z6L0 340 aaPredicted RBP17.45■□□□□ 0.38
EXOSC3-207ENST00000490516 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
EXOSC3-207ENST00000490516 SMCR8Q8TEV9 937 aaPredicted RBP17.45■□□□□ 0.38
EXOSC3-207ENST00000490516 SYMPKQ92797 1274 aaKnown RBP17.45■□□□□ 0.38
EXOSC3-207ENST00000490516 CNNM1Q9NRU3 951 aa17.45■□□□□ 0.38
EXOSC3-207ENST00000490516 OGDHLQ9ULD0 1010 aa17.45■□□□□ 0.38
EXOSC3-207ENST00000490516 CDH23Q9H251 3354 aa17.44■□□□□ 0.38
EXOSC3-207ENST00000490516 TCP10Q12799 353 aa17.44■□□□□ 0.38
EXOSC3-207ENST00000490516 UBE4AQ14139 1066 aa17.44■□□□□ 0.38
EXOSC3-207ENST00000490516 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
EXOSC3-207ENST00000490516 FASTKD5Q7L8L6 764 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-207ENST00000490516 MYLIPQ8WY64 445 aa17.44■□□□□ 0.38
EXOSC3-207ENST00000490516 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
EXOSC3-207ENST00000490516 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
EXOSC3-207ENST00000490516 FAM151AQ8WW52 585 aa17.43■□□□□ 0.38
EXOSC3-207ENST00000490516 SEMA6BQ9H3T3 888 aa17.43■□□□□ 0.38
EXOSC3-207ENST00000490516 ZHX2Q9Y6X8 837 aa17.43■□□□□ 0.38
EXOSC3-207ENST00000490516 DOCK2Q92608 1830 aa17.42■□□□□ 0.38
EXOSC3-207ENST00000490516 DNAH12Q6ZR08 3092 aa17.42■□□□□ 0.38
EXOSC3-207ENST00000490516 PLA2G5P39877 138 aa17.42■□□□□ 0.38
EXOSC3-207ENST00000490516 LMBR1LQ6UX01 489 aa17.42■□□□□ 0.38
EXOSC3-207ENST00000490516 STK31Q9BXU1 1019 aa17.42■□□□□ 0.38
EXOSC3-207ENST00000490516 CHMP4AQ9BY43 222 aa17.42■□□□□ 0.38
EXOSC3-207ENST00000490516 SLC45A1Q9Y2W3 748 aa17.42■□□□□ 0.38
EXOSC3-207ENST00000490516 MAST2Q6P0Q8 1798 aa17.41■□□□□ 0.38
EXOSC3-207ENST00000490516 TNFRSF10AO00220 468 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms