RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 EPHA10Q5JZY3 1008 aa10.4□□□□□ -0.74
USP39-216ENST00000490193 ZNF594Q96JF6 807 aaPredicted RBP10.4□□□□□ -0.74
USP39-216ENST00000490193 FAM84BQ96KN1 310 aaPredicted RBP10.4□□□□□ -0.74
USP39-216ENST00000490193 TMEM39BQ9GZU3 492 aa10.4□□□□□ -0.74
USP39-216ENST00000490193 CNNM1Q9NRU3 951 aa10.4□□□□□ -0.74
USP39-216ENST00000490193 CSADQ9Y600 493 aa10.4□□□□□ -0.74
USP39-216ENST00000490193 RPAP1Q9BWH6 1393 aaPredicted RBP10.39□□□□□ -0.75
USP39-216ENST00000490193 TLR2O60603 784 aa10.39□□□□□ -0.75
USP39-216ENST00000490193 WDHD1O75717 1129 aaPredicted RBP10.39□□□□□ -0.75
USP39-216ENST00000490193 CETPP11597 493 aa10.39□□□□□ -0.75
USP39-216ENST00000490193 HIBADHP31937 336 aaKnown RBP10.39□□□□□ -0.75
USP39-216ENST00000490193 GYG1P46976 350 aa10.39□□□□□ -0.75
USP39-216ENST00000490193 IRX5P78411 483 aaPredicted RBP10.39□□□□□ -0.75
USP39-216ENST00000490193 LACTBP83111 547 aaPredicted RBP10.39□□□□□ -0.75
USP39-216ENST00000490193 TAF7LQ5H9L4 462 aa10.39□□□□□ -0.75
USP39-216ENST00000490193 FKBP1CQ5VVH2 108 aa10.39□□□□□ -0.75
USP39-216ENST00000490193 ERO1BQ86YB8 467 aa10.39□□□□□ -0.75
USP39-216ENST00000490193 CHMP3Q9Y3E7 222 aa10.39□□□□□ -0.75
USP39-216ENST00000490193 SNCAIPQ9Y6H5 919 aa10.39□□□□□ -0.75
USP39-216ENST00000490193 TRIOBPQ9H2D6 2365 aa10.39□□□□□ -0.75
USP39-216ENST00000490193 RANBP2P49792 3224 aaKnown RBP10.39□□□□□ -0.75
USP39-216ENST00000490193 TCP10L2B9ZVM9 353 aa10.38□□□□□ -0.75
USP39-216ENST00000490193 F6X3S4 739 aa10.38□□□□□ -0.75
USP39-216ENST00000490193 DLL1O00548 723 aa10.38□□□□□ -0.75
USP39-216ENST00000490193 PLIN1O60240 522 aa10.38□□□□□ -0.75
USP39-216ENST00000490193 SLC4A8Q2Y0W8 1093 aa10.38□□□□□ -0.75
USP39-216ENST00000490193 FAM83AQ86UY5 434 aa10.38□□□□□ -0.75
USP39-216ENST00000490193 PLCD3Q8N3E9 789 aa10.38□□□□□ -0.75
USP39-216ENST00000490193 TBC1D22AQ8WUA7 517 aa10.38□□□□□ -0.75
USP39-216ENST00000490193 MRIQ9BWK5 157 aa10.38□□□□□ -0.75
USP39-216ENST00000490193 MYH13Q9UKX3 1938 aa10.38□□□□□ -0.75
USP39-216ENST00000490193 MROH5Q6ZUA9 1318 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 BTBD19C9JJ37 291 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 ALDH1L1O75891 902 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 PPIL2Q13356 520 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 SNAPC2Q13487 334 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 KIF22Q14807 665 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 GRIK5Q16478 980 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 FBXO33Q7Z6M2 555 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 SH3TC2Q8TF17 1288 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 TEKT1Q969V4 418 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 HOOK2Q96ED9 719 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 ARHGAP39Q9C0H5 1083 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 RIPOR2Q9Y4F9 1068 aa10.37□□□□□ -0.75
USP39-216ENST00000490193 MGAMO43451 1857 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 H0YGN5 161 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 IRF6O14896 467 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 SNPHO15079 494 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 EXOSC9Q06265 439 aaKnown RBP10.36□□□□□ -0.75
USP39-216ENST00000490193 MMRN1Q13201 1228 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 C17orf99Q6UX52 265 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 WDR63Q8IWG1 891 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 SHISA4Q96DD7 197 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 KAZALD1Q96I82 304 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 ZDHHC15Q96MV8 337 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 WRNIP1Q96S55 665 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 PUS3Q9BZE2 481 aaKnown RBP10.36□□□□□ -0.75
USP39-216ENST00000490193 SUGT1Q9Y2Z0 365 aa10.36□□□□□ -0.75
USP39-216ENST00000490193 UTYO14607 1347 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 MAST3O60307 1309 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 KIF16BQ96L93 1317 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 ADGRA2Q96PE1 1338 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 PPATQ06203 517 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 RABL6Q3YEC7 729 aaPredicted RBP10.35□□□□□ -0.75
USP39-216ENST00000490193 CCDC184Q52MB2 194 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 DCAF15Q66K64 600 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 UBE2Q1Q7Z7E8 422 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 SPNS2Q8IVW8 549 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 VGLL2Q8N8G2 317 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 ZKSCAN4Q969J2 545 aaPredicted RBP10.35□□□□□ -0.75
USP39-216ENST00000490193 OCEL1Q9H607 264 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 C9orf78Q9NZ63 289 aaPredicted RBP10.35□□□□□ -0.75
USP39-216ENST00000490193 TMOD2Q9NZR1 351 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 SRRDQ9UH36 339 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 COL6A3P12111 3177 aa10.35□□□□□ -0.75
USP39-216ENST00000490193 CTGFP29279 349 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 CACNB3P54284 484 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 CAVIN4Q5BKX8 364 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 APOBEC3HQ6NTF7 200 aaKnown RBP10.34□□□□□ -0.75
USP39-216ENST00000490193 HHIPL2Q6UWX4 724 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 ANKRD23Q86SG2 305 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 NKX2-3Q8TAU0 364 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 SUCLG2Q96I99 432 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 TRIM47Q96LD4 638 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 ZNF341Q9BYN7 854 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 SRCIN1Q9C0H9 1055 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 PRO3102Q9H379 93 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 KCNH4Q9UQ05 1017 aa10.34□□□□□ -0.75
USP39-216ENST00000490193 PDE8BO95263 885 aa10.33□□□□□ -0.76
USP39-216ENST00000490193 GJB1P08034 283 aa10.33□□□□□ -0.76
USP39-216ENST00000490193 HOXD10P28358 340 aa10.33□□□□□ -0.76
USP39-216ENST00000490193 GJA8P48165 433 aa10.33□□□□□ -0.76
USP39-216ENST00000490193 CHAF1AQ13111 956 aaPredicted RBP10.33□□□□□ -0.76
USP39-216ENST00000490193 MTFR1Q15390 333 aa10.33□□□□□ -0.76
USP39-216ENST00000490193 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
USP39-216ENST00000490193 ZNF112Q9UJU3 913 aa10.33□□□□□ -0.76
USP39-216ENST00000490193 IQSEC3Q9UPP2 1182 aaPredicted RBP10.33□□□□□ -0.76
USP39-216ENST00000490193 PTPRFP10586 1907 aa10.33□□□□□ -0.76
USP39-216ENST00000490193 DOCK2Q92608 1830 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms