RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 STRBPQ96SI9 672 aaKnown RBP4.03□□□□□ -1.76
UBXN4-208ENST00000490163 FCF1Q9Y324 198 aaKnown RBP4.03□□□□□ -1.76
UBXN4-208ENST00000490163 RTCBQ9Y3I0 505 aaKnown RBP4.03□□□□□ -1.76
UBXN4-208ENST00000490163 SLC12A7Q9Y666 1083 aa4.03□□□□□ -1.76
UBXN4-208ENST00000490163 C9IYK1 514 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 S1PR4O95977 384 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 SCG5P05408 212 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 FAM153BP0C7A2 387 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 FAM157BP0CG42 384 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 NME2P22392 152 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 RNF219Q5W0B1 726 aaPredicted RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 CHST15Q7LFX5 561 aaPredicted RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 PODNQ7Z5L7 613 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 NKAIN3Q8N8D7 197 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 TTC8Q8TAM2 541 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 MRGPRX3Q96LB0 322 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 RHOBTB2Q9BYZ6 727 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 PDGFDQ9GZP0 370 aaPredicted RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 SPINT1O43278 529 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 LGR5O75473 907 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 RPL6Q02878 288 aaKnown RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 TLR1Q15399 786 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 HSP90AB4PQ58FF6 505 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 ODR4Q5SWX8 454 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 RC3H1Q5TC82 1133 aaKnown RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 CREB3L3Q68CJ9 461 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 APBB1IPQ7Z5R6 666 aaPredicted RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 MAGEB6Q8N7X4 407 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 ZC3H10Q96K80 434 aaKnown RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 ORAI2Q96SN7 254 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 NUP88Q99567 741 aaPredicted RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 RUSC1Q9BVN2 902 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 PUS7LQ9H0K6 701 aaKnown RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 ABI2Q9NYB9 513 aaPredicted RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 PRR13Q9NZ81 148 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 COMMD10Q9Y6G5 202 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 SMARCA4P51532 1647 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 TRIM37O94972 964 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 F13A1P00488 732 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 IDH3AP50213 366 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 MECP2P51608 486 aaKnown RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 TTF1Q15361 905 aaPredicted RBP4.02□□□□□ -1.77
UBXN4-208ENST00000490163 DGKHQ86XP1 1220 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 CHMP3Q9Y3E7 222 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 SMARCA2P51531 1590 aa4.02□□□□□ -1.77
UBXN4-208ENST00000490163 TRIM75PA6NK02 468 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 ZNF165P49910 485 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 NCAPHQ15003 741 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 COL13A1Q5TAT6 717 aaPredicted RBP4.01□□□□□ -1.77
UBXN4-208ENST00000490163 EFCAB2Q5VUJ9 269 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 REC114Q7Z4M0 266 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 SPICE1Q8N0Z3 855 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 JDP2Q8WYK2 163 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 TRMT2BQ96GJ1 504 aaKnown RBP4.01□□□□□ -1.77
UBXN4-208ENST00000490163 EXOC2Q96KP1 924 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 SARGQ9BW04 601 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 GSX1Q9H4S2 264 aaPredicted RBP4.01□□□□□ -1.77
UBXN4-208ENST00000490163 ARHGEF4Q9NR80 690 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 PLA2G2EQ9NZK7 142 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 PPP1R1BQ9UD71 204 aaPredicted RBP4.01□□□□□ -1.77
UBXN4-208ENST00000490163 BDNFP23560 247 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 MAN1A1P33908 653 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 AFF1P51825 1210 aaKnown RBP4.01□□□□□ -1.77
UBXN4-208ENST00000490163 TBCELQ5QJ74 424 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 CYFIP1Q7L576 1253 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 FAM178BQ8IXR5 827 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 NKAPQ8N5F7 415 aaKnown RBP4.01□□□□□ -1.77
UBXN4-208ENST00000490163 GPR152Q8TDT2 470 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 SLKQ9H2G2 1235 aaPredicted RBP4.01□□□□□ -1.77
UBXN4-208ENST00000490163 LIN7BQ9HAP6 207 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 EIF4G1Q04637 1599 aaKnown RBP4.01□□□□□ -1.77
UBXN4-208ENST00000490163 LTBP3Q9NS15 1303 aa4.01□□□□□ -1.77
UBXN4-208ENST00000490163 A0A1B0GVC2 190 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 RNF223E7ERA6 249 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 DNAJC8O75937 253 aaPredicted RBP4□□□□□ -1.77
UBXN4-208ENST00000490163 SSBP05455 408 aaKnown RBP eCLIP4□□□□□ -1.77
UBXN4-208ENST00000490163 GJA9P57773 515 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 INO80DQ53TQ3 878 aaPredicted RBP4□□□□□ -1.77
UBXN4-208ENST00000490163 PERM1Q5SV97 790 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 MEIOBQ8N635 442 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 CHAC2Q8WUX2 184 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 SPOCK3Q9BQ16 436 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 PCDHGC5Q9Y5F6 944 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 NPFFR2Q9Y5X5 522 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 RBAK-RBAKDNI3L0D1 243 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 FAM163BP0C2L3 166 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 NEK2P51955 445 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 DHX8Q14562 1220 aaKnown RBP4□□□□□ -1.77
UBXN4-208ENST00000490163 LRRFIP1Q32MZ4 808 aaKnown RBP4□□□□□ -1.77
UBXN4-208ENST00000490163 RIN3Q8TB24 985 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 LGR6Q9HBX8 967 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 NEUROD4Q9HD90 331 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 GABBR1Q9UBS5 961 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 SOX13Q9UN79 622 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 SNCAIPQ9Y6H5 919 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 A0A1W2PQU0 124 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 WNT9AO14904 365 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 PHACTR2O75167 634 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 RASGRP1O95267 797 aa4□□□□□ -1.77
UBXN4-208ENST00000490163 TM4SF4P48230 202 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms