RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 NBPF12Q5TAG4 269 aaPredicted RBP21.18■□□□□ 0.98
MDC1-206ENST00000489540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.18■□□□□ 0.98
MDC1-206ENST00000489540 BCL11AQ9H165 835 aa21.18■□□□□ 0.98
MDC1-206ENST00000489540 MROH7-TTC4A0A0A0MT08 1334 aa21.17■□□□□ 0.98
MDC1-206ENST00000489540 GPR75-ASB3A0A0A6YYF3 556 aa21.17■□□□□ 0.98
MDC1-206ENST00000489540 UBE2Q2LH0YL09 131 aa21.17■□□□□ 0.98
MDC1-206ENST00000489540 TMEM39BQ9GZU3 492 aa21.17■□□□□ 0.98
MDC1-206ENST00000489540 MAP4K4O95819 1239 aaPredicted RBP21.16■□□□□ 0.98
MDC1-206ENST00000489540 MAP3K11Q16584 847 aa21.16■□□□□ 0.98
MDC1-206ENST00000489540 MOB2Q70IA6 237 aa21.16■□□□□ 0.98
MDC1-206ENST00000489540 ZNF384Q8TF68 577 aa21.16■□□□□ 0.98
MDC1-206ENST00000489540 TEPSINQ96N21 525 aa21.16■□□□□ 0.98
MDC1-206ENST00000489540 UNCXA6NJT0 531 aa21.15■□□□□ 0.98
MDC1-206ENST00000489540 BTDP43251 543 aa21.15■□□□□ 0.98
MDC1-206ENST00000489540 MAP2K1Q02750 393 aaPredicted RBP21.15■□□□□ 0.98
MDC1-206ENST00000489540 NOGQ13253 232 aa21.15■□□□□ 0.98
MDC1-206ENST00000489540 HDAC1Q13547 482 aaPredicted RBP21.15■□□□□ 0.98
MDC1-206ENST00000489540 PRKG1Q13976 671 aa21.15■□□□□ 0.98
MDC1-206ENST00000489540 FAM151AQ8WW52 585 aa21.15■□□□□ 0.98
MDC1-206ENST00000489540 HOOK2Q96ED9 719 aa21.15■□□□□ 0.98
MDC1-206ENST00000489540 PIH1D3Q9NQM4 214 aaKnown RBP21.15■□□□□ 0.98
MDC1-206ENST00000489540 ANGEL1Q9UNK9 670 aaKnown RBP21.15■□□□□ 0.98
MDC1-206ENST00000489540 SMARCA5O60264 1052 aaPredicted RBP21.14■□□□□ 0.98
MDC1-206ENST00000489540 TTF1Q15361 905 aaPredicted RBP21.14■□□□□ 0.98
MDC1-206ENST00000489540 LDLRAD1Q5T700 205 aa21.14■□□□□ 0.98
MDC1-206ENST00000489540 NAA16Q6N069 864 aaPredicted RBP21.14■□□□□ 0.98
MDC1-206ENST00000489540 TMED8Q6PL24 325 aaPredicted RBP21.14■□□□□ 0.98
MDC1-206ENST00000489540 IDI2Q9BXS1 227 aa21.14■□□□□ 0.98
MDC1-206ENST00000489540 MYH13Q9UKX3 1938 aa21.14■□□□□ 0.97
MDC1-206ENST00000489540 ATP5JP18859 108 aa21.13■□□□□ 0.97
MDC1-206ENST00000489540 IREB2P48200 963 aaKnown RBP21.13■□□□□ 0.97
MDC1-206ENST00000489540 PAPPA2Q9BXP8 1791 aa21.13■□□□□ 0.97
MDC1-206ENST00000489540 FAM155AB1AL88 458 aaPredicted RBP21.12■□□□□ 0.97
MDC1-206ENST00000489540 USP2O75604 605 aaPredicted RBP21.12■□□□□ 0.97
MDC1-206ENST00000489540 BAG3O95817 575 aa21.12■□□□□ 0.97
MDC1-206ENST00000489540 MAP3K12Q12852 859 aa21.12■□□□□ 0.97
MDC1-206ENST00000489540 NFIAQ12857 509 aa21.12■□□□□ 0.97
MDC1-206ENST00000489540 EXOC6Q8TAG9 804 aa21.12■□□□□ 0.97
MDC1-206ENST00000489540 NOL10Q9BSC4 688 aaKnown RBP21.12■□□□□ 0.97
MDC1-206ENST00000489540 AOC2O75106 756 aa21.12■□□□□ 0.97
MDC1-206ENST00000489540 ENTPD3O75355 529 aa21.12■□□□□ 0.97
MDC1-206ENST00000489540 IDH1O75874 414 aaKnown RBP21.12■□□□□ 0.97
MDC1-206ENST00000489540 SLC10A3P09131 477 aa21.12■□□□□ 0.97
MDC1-206ENST00000489540 GCC1Q96CN9 775 aa21.12■□□□□ 0.97
MDC1-206ENST00000489540 RHBDL3P58872 404 aa21.11■□□□□ 0.97
MDC1-206ENST00000489540 TCP10Q12799 353 aa21.11■□□□□ 0.97
MDC1-206ENST00000489540 CDAN1Q8IWY9 1227 aa21.11■□□□□ 0.97
MDC1-206ENST00000489540 RWDD1Q9H446 243 aaPredicted RBP21.11■□□□□ 0.97
MDC1-206ENST00000489540 ANTXR1Q9H6X2 564 aa21.11■□□□□ 0.97
MDC1-206ENST00000489540 WBP1LQ9NX94 342 aa21.11■□□□□ 0.97
MDC1-206ENST00000489540 FAM198AQ9UFP1 575 aa21.11■□□□□ 0.97
MDC1-206ENST00000489540 NDUFB9Q9Y6M9 179 aa21.11■□□□□ 0.97
MDC1-206ENST00000489540 RPAP1Q9BWH6 1393 aaPredicted RBP21.1■□□□□ 0.97
MDC1-206ENST00000489540 NPM3O75607 178 aaKnown RBP21.1■□□□□ 0.97
MDC1-206ENST00000489540 HSPA1AP0DMV8 641 aaKnown RBP21.1■□□□□ 0.97
MDC1-206ENST00000489540 HSPA1BP0DMV9 641 aaKnown RBP21.1■□□□□ 0.97
MDC1-206ENST00000489540 PLCG2P16885 1265 aa21.1■□□□□ 0.97
MDC1-206ENST00000489540 RGS3P49796 1198 aa21.1■□□□□ 0.97
MDC1-206ENST00000489540 PPP4CP60510 307 aa21.1■□□□□ 0.97
MDC1-206ENST00000489540 RASAL3Q86YV0 1011 aa21.1■□□□□ 0.97
MDC1-206ENST00000489540 SLC10A4Q96EP9 437 aa21.1■□□□□ 0.97
MDC1-206ENST00000489540 GPATCH3Q96I76 525 aa21.1■□□□□ 0.97
MDC1-206ENST00000489540 BOLA2Q9H3K6 86 aa21.1■□□□□ 0.97
MDC1-206ENST00000489540 ECHDC1Q9NTX5 307 aa21.1■□□□□ 0.97
MDC1-206ENST00000489540 ZBTB47Q9UFB7 747 aaPredicted RBP21.1■□□□□ 0.97
MDC1-206ENST00000489540 FZD1Q9UP38 647 aa21.1■□□□□ 0.97
MDC1-206ENST00000489540 ECM29Q5VYK3 1845 aa21.1■□□□□ 0.97
MDC1-206ENST00000489540 SSC5DA1L4H1 1573 aa21.09■□□□□ 0.97
MDC1-206ENST00000489540 WDHD1O75717 1129 aaPredicted RBP21.09■□□□□ 0.97
MDC1-206ENST00000489540 CYP7A1P22680 504 aa21.09■□□□□ 0.97
MDC1-206ENST00000489540 DCAF15Q66K64 600 aa21.09■□□□□ 0.97
MDC1-206ENST00000489540 ANKRD13AQ8IZ07 590 aa21.09■□□□□ 0.97
MDC1-206ENST00000489540 AIDAQ96BJ3 306 aa21.09■□□□□ 0.97
MDC1-206ENST00000489540 DNAJC2Q99543 621 aaKnown RBP21.09■□□□□ 0.97
MDC1-206ENST00000489540 HAUS7Q99871 368 aa21.09■□□□□ 0.97
MDC1-206ENST00000489540 GOLIM4O00461 696 aa21.08■□□□□ 0.97
MDC1-206ENST00000489540 CERS3Q8IU89 383 aa21.08■□□□□ 0.97
MDC1-206ENST00000489540 REM2Q8IYK8 340 aaPredicted RBP21.08■□□□□ 0.97
MDC1-206ENST00000489540 MAGEB6Q8N7X4 407 aa21.08■□□□□ 0.97
MDC1-206ENST00000489540 BEGAINQ9BUH8 593 aa21.08■□□□□ 0.97
MDC1-206ENST00000489540 MAP3K9P80192 1104 aa21.07■□□□□ 0.96
MDC1-206ENST00000489540 KIF23Q02241 960 aaPredicted RBP21.07■□□□□ 0.96
MDC1-206ENST00000489540 ANKRD45Q5TZF3 282 aa21.07■□□□□ 0.96
MDC1-206ENST00000489540 ZFPM1Q8IX07 1006 aa21.07■□□□□ 0.96
MDC1-206ENST00000489540 PAG1Q9NWQ8 432 aa21.07■□□□□ 0.96
MDC1-206ENST00000489540 AATFQ9NY61 560 aaKnown RBP eCLIP21.07■□□□□ 0.96
MDC1-206ENST00000489540 PICALMQ13492 652 aa21.06■□□□□ 0.96
MDC1-206ENST00000489540 ZSCAN29Q8IWY8 852 aaPredicted RBP21.06■□□□□ 0.96
MDC1-206ENST00000489540 TEX11Q8IYF3 940 aa21.06■□□□□ 0.96
MDC1-206ENST00000489540 ZIC5Q96T25 663 aa21.06■□□□□ 0.96
MDC1-206ENST00000489540 AKAP11Q9UKA4 1901 aa21.06■□□□□ 0.96
MDC1-206ENST00000489540 SLC9C2Q5TAH2 1124 aa21.05■□□□□ 0.96
MDC1-206ENST00000489540 ADGRA1Q86SQ6 560 aa21.05■□□□□ 0.96
MDC1-206ENST00000489540 SH3RF3Q8TEJ3 882 aaPredicted RBP21.05■□□□□ 0.96
MDC1-206ENST00000489540 ZNF341Q9BYN7 854 aa21.05■□□□□ 0.96
MDC1-206ENST00000489540 DDX4Q9NQI0 724 aaKnown RBP21.05■□□□□ 0.96
MDC1-206ENST00000489540 RFX7Q2KHR2 1363 aa21.05■□□□□ 0.96
MDC1-206ENST00000489540 MIGA2Q7L4E1 593 aa21.04■□□□□ 0.96
MDC1-206ENST00000489540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.04■□□□□ 0.963e-10■■□□□ 11.9
MDC1-206ENST00000489540 CLMNQ96JQ2 1002 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms