RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PLXNA1Q9UIW2 1896 aa10.27□□□□□ -0.77
EXOSC3-206ENST00000489414 ATRNL1Q5VV63 1379 aa10.26□□□□□ -0.77
EXOSC3-206ENST00000489414 PLXNA3P51805 1871 aa10.26□□□□□ -0.77
EXOSC3-206ENST00000489414 G3V3G9 751 aa10.26□□□□□ -0.77
EXOSC3-206ENST00000489414 HMGCRP04035 888 aa10.26□□□□□ -0.77
EXOSC3-206ENST00000489414 DCAF8Q5TAQ9 597 aa10.26□□□□□ -0.77
EXOSC3-206ENST00000489414 HFE2Q6ZVN8 426 aa10.26□□□□□ -0.77
EXOSC3-206ENST00000489414 BADQ92934 168 aa10.26□□□□□ -0.77
EXOSC3-206ENST00000489414 RALYQ9UKM9 306 aaKnown RBP10.26□□□□□ -0.77
EXOSC3-206ENST00000489414 ZNF804BA4D1E1 1349 aa10.26□□□□□ -0.77
EXOSC3-206ENST00000489414 PRRC2BQ5JSZ5 2229 aaKnown RBP10.25□□□□□ -0.77
EXOSC3-206ENST00000489414 MMP14P50281 582 aa10.25□□□□□ -0.77
EXOSC3-206ENST00000489414 PPP1R42Q7Z4L9 355 aa10.25□□□□□ -0.77
EXOSC3-206ENST00000489414 HERVK_113Q902F9 699 aa10.25□□□□□ -0.77
EXOSC3-206ENST00000489414 MAP3K15Q6ZN16 1313 aa10.25□□□□□ -0.77
EXOSC3-206ENST00000489414 ASH1LQ9NR48 2969 aaKnown RBP10.25□□□□□ -0.77
EXOSC3-206ENST00000489414 A0A0G2JMZ2 1700 aa10.24□□□□□ -0.77
EXOSC3-206ENST00000489414 SPDYE5A6NIY4 337 aa10.24□□□□□ -0.77
EXOSC3-206ENST00000489414 KCNQ3O43525 872 aa10.24□□□□□ -0.77
EXOSC3-206ENST00000489414 TCF15Q12870 199 aa10.24□□□□□ -0.77
EXOSC3-206ENST00000489414 SNAPC2Q13487 334 aa10.24□□□□□ -0.77
EXOSC3-206ENST00000489414 PHF12Q96QT6 1004 aa10.24□□□□□ -0.77
EXOSC3-206ENST00000489414 MXD3Q9BW11 206 aa10.24□□□□□ -0.77
EXOSC3-206ENST00000489414 COG5Q9UP83 839 aa10.24□□□□□ -0.77
EXOSC3-206ENST00000489414 BRWD1Q9NSI6 2320 aa10.24□□□□□ -0.77
EXOSC3-206ENST00000489414 CEMIPQ8WUJ3 1361 aa10.24□□□□□ -0.77
EXOSC3-206ENST00000489414 PDHXO00330 501 aa10.23□□□□□ -0.77
EXOSC3-206ENST00000489414 IRF6O14896 467 aa10.23□□□□□ -0.77
EXOSC3-206ENST00000489414 TRIM32Q13049 653 aa10.23□□□□□ -0.77
EXOSC3-206ENST00000489414 SKIV2LQ15477 1246 aaKnown RBP10.23□□□□□ -0.77
EXOSC3-206ENST00000489414 DACT2Q5SW24 774 aa10.23□□□□□ -0.77
EXOSC3-206ENST00000489414 ANKRD23Q86SG2 305 aa10.23□□□□□ -0.77
EXOSC3-206ENST00000489414 MFSD14AQ96MC6 490 aa10.23□□□□□ -0.77
EXOSC3-206ENST00000489414 PBX4Q9BYU1 374 aa10.23□□□□□ -0.77
EXOSC3-206ENST00000489414 MYO3BQ8WXR4 1341 aa10.23□□□□□ -0.77
EXOSC3-206ENST00000489414 FRMPD3Q5JV73 1810 aa10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 TNPO2O14787 897 aaKnown RBP10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 HOXB3P14651 431 aaPredicted RBP10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 PBX2P40425 430 aa10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 EPHB4P54760 987 aa10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 ST3GAL2Q16842 350 aa10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 GJD3Q8N144 294 aa10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 MICALL1Q8N3F8 863 aa10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 CELF1Q92879 486 aaKnown RBP10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 L3MBTL2Q969R5 705 aa10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 TESK2Q96S53 571 aa10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 FAM86C1Q9NVL1 165 aa10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 PODXL2Q9NZ53 605 aa10.22□□□□□ -0.77
EXOSC3-206ENST00000489414 MAP3K9P80192 1104 aa10.21□□□□□ -0.77
EXOSC3-206ENST00000489414 MTHFSDQ2M296 383 aaKnown RBP10.21□□□□□ -0.77
EXOSC3-206ENST00000489414 PARP10Q53GL7 1025 aa10.21□□□□□ -0.77
EXOSC3-206ENST00000489414 IER5LQ5T953 404 aa10.21□□□□□ -0.77
EXOSC3-206ENST00000489414 PRRX2Q99811 253 aa10.21□□□□□ -0.77
EXOSC3-206ENST00000489414 UTP14AQ9BVJ6 771 aaKnown RBP10.21□□□□□ -0.77
EXOSC3-206ENST00000489414 CARD14Q9BXL6 1004 aa10.21□□□□□ -0.77
EXOSC3-206ENST00000489414 COL4A6Q14031 1691 aa10.21□□□□□ -0.78
EXOSC3-206ENST00000489414 AK9Q5TCS8 1911 aa10.21□□□□□ -0.78
EXOSC3-206ENST00000489414 NAV2Q8IVL1 2488 aa10.21□□□□□ -0.78
EXOSC3-206ENST00000489414 POTEB3A0JP26 581 aa10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 DCXO43602 365 aa10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 UFL1O94874 794 aa10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 SNRPA1P09661 255 aaKnown RBP10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 HCLS1P14317 486 aaPredicted RBP10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 RTP1P59025 263 aa10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 TEFQ10587 303 aa10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 MAP3K21Q5TCX8 1036 aa10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 POTEBQ6S5H4 581 aa10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 ERO1BQ86YB8 467 aa10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 ZKSCAN4Q969J2 545 aaPredicted RBP10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 PARK7Q99497 189 aaKnown RBP10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 SENP6Q9GZR1 1112 aaPredicted RBP10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 CSADQ9Y600 493 aa10.2□□□□□ -0.78
EXOSC3-206ENST00000489414 RLFQ13129 1914 aa10.19□□□□□ -0.78
EXOSC3-206ENST00000489414 PROB1E7EW31 1015 aa10.19□□□□□ -0.78
EXOSC3-206ENST00000489414 ATN1P54259 1190 aaPredicted RBP10.19□□□□□ -0.78
EXOSC3-206ENST00000489414 PPIL2Q13356 520 aa10.19□□□□□ -0.78
EXOSC3-206ENST00000489414 TTLL7Q6ZT98 887 aa10.19□□□□□ -0.78
EXOSC3-206ENST00000489414 ASCL5Q7RTU5 278 aa10.19□□□□□ -0.78
EXOSC3-206ENST00000489414 PRDM5Q9NQX1 630 aaPredicted RBP10.19□□□□□ -0.78
EXOSC3-206ENST00000489414 KCNH4Q9UQ05 1017 aa10.19□□□□□ -0.78
EXOSC3-206ENST00000489414 SNCAIPQ9Y6H5 919 aa10.19□□□□□ -0.78
EXOSC3-206ENST00000489414 KIF6Q6ZMV9 814 aa10.18□□□□□ -0.78
EXOSC3-206ENST00000489414 DGLUCYQ7Z3D6 616 aa10.18□□□□□ -0.78
EXOSC3-206ENST00000489414 FAM178BQ8IXR5 827 aa10.18□□□□□ -0.78
EXOSC3-206ENST00000489414 IL17REQ8NFR9 667 aa10.18□□□□□ -0.78
EXOSC3-206ENST00000489414 CARD11Q9BXL7 1154 aa10.18□□□□□ -0.78
EXOSC3-206ENST00000489414 PDLIM7Q9NR12 457 aa10.18□□□□□ -0.78
EXOSC3-206ENST00000489414 TECTAO75443 2155 aa10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 TRIM43BA6NCK2 446 aa10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 CYP2C8P10632 490 aa10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 MOGSQ13724 837 aa10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 RASA3Q14644 834 aa10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 STRIP1Q5VSL9 837 aa10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 GIGYF2Q6Y7W6 1299 aaKnown RBP10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 HLA-CQ95604 372 aa10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 TRIM43Q96BQ3 446 aaPredicted RBP10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 COA7Q96BR5 231 aa10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 ZBTB3Q9H5J0 574 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms