RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ARL1P40616 181 aaPredicted RBP19.8■□□□□ 0.76
NPHP4-209ENST00000489180 HS2ST1Q7LGA3 356 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 LEO1Q8WVC0 666 aaPredicted RBP19.8■□□□□ 0.76
NPHP4-209ENST00000489180 RBM28Q9NW13 759 aaKnown RBP19.8■□□□□ 0.76
NPHP4-209ENST00000489180 TBC1D8BQ0IIM8 1120 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 SV2BQ7L1I2 683 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 IMPG2Q9BZV3 1241 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 EIF2AK4Q9P2K8 1649 aaKnown RBP19.8■□□□□ 0.76
NPHP4-209ENST00000489180 TUBB4BP68371 445 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 PDE4DQ08499 809 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 SREK1Q8WXA9 508 aaKnown RBP19.8■□□□□ 0.76
NPHP4-209ENST00000489180 DNAJC5BQ9UF47 199 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 HOXC9P31274 260 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 LMBRD1Q9NUN5 540 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 RIMBP2O15034 1052 aa19.79■□□□□ 0.76
NPHP4-209ENST00000489180 FAM89AQ96GI7 184 aa19.79■□□□□ 0.76
NPHP4-209ENST00000489180 ZNF594Q96JF6 807 aaPredicted RBP19.79■□□□□ 0.76
NPHP4-209ENST00000489180 MYL10Q9BUA6 226 aa19.79■□□□□ 0.76
NPHP4-209ENST00000489180 PKD2L1Q9P0L9 805 aa19.79■□□□□ 0.76
NPHP4-209ENST00000489180 ZNF608Q9ULD9 1512 aaPredicted RBP19.79■□□□□ 0.76
NPHP4-209ENST00000489180 PNMA6EA0A0J9YXQ4 647 aa19.79■□□□□ 0.76
NPHP4-209ENST00000489180 RAPGEF6Q8TEU7 1601 aa19.79■□□□□ 0.76
NPHP4-209ENST00000489180 CADPS2Q86UW7 1296 aa19.79■□□□□ 0.76
NPHP4-209ENST00000489180 SAMD15Q9P1V8 674 aa19.79■□□□□ 0.76
NPHP4-209ENST00000489180 MTRF1LQ9UGC7 380 aaKnown RBP19.79■□□□□ 0.76
NPHP4-209ENST00000489180 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
NPHP4-209ENST00000489180 PLCH2O75038 1416 aa19.78■□□□□ 0.76
NPHP4-209ENST00000489180 NSFL1CQ9UNZ2 370 aaKnown RBP19.78■□□□□ 0.76
NPHP4-209ENST00000489180 ZFYVE9O95405 1425 aa19.78■□□□□ 0.76
NPHP4-209ENST00000489180 PARP1P09874 1014 aaKnown RBP19.78■□□□□ 0.76
NPHP4-209ENST00000489180 ZNF445P59923 1031 aa19.78■□□□□ 0.76
NPHP4-209ENST00000489180 UTP14CQ5TAP6 766 aaKnown RBP19.78■□□□□ 0.76
NPHP4-209ENST00000489180 AFAP1L1Q8TED9 768 aa19.78■□□□□ 0.76
NPHP4-209ENST00000489180 SMC6Q96SB8 1091 aa19.78■□□□□ 0.76
NPHP4-209ENST00000489180 SP4Q02446 784 aa19.78■□□□□ 0.76
NPHP4-209ENST00000489180 SYNRGQ9UMZ2 1314 aa19.78■□□□□ 0.76
NPHP4-209ENST00000489180 SGSM2O43147 1006 aa19.78■□□□□ 0.76
NPHP4-209ENST00000489180 RILPL1Q5EBL4 403 aa19.78■□□□□ 0.76
NPHP4-209ENST00000489180 WDHD1O75717 1129 aaPredicted RBP19.77■□□□□ 0.76
NPHP4-209ENST00000489180 LDHBP07195 334 aaKnown RBP19.77■□□□□ 0.76
NPHP4-209ENST00000489180 ERCC3P19447 782 aa19.77■□□□□ 0.76
NPHP4-209ENST00000489180 CYP26C1Q6V0L0 522 aa19.77■□□□□ 0.76
NPHP4-209ENST00000489180 VEZTQ9HBM0 779 aa19.77■□□□□ 0.76
NPHP4-209ENST00000489180 V9GY48 417 aaPredicted RBP19.77■□□□□ 0.76
NPHP4-209ENST00000489180 ZMYM4Q5VZL5 1548 aa19.77■□□□□ 0.76
NPHP4-209ENST00000489180 JAK2O60674 1132 aa19.77■□□□□ 0.76
NPHP4-209ENST00000489180 TRIM35Q9UPQ4 493 aa19.77■□□□□ 0.76
NPHP4-209ENST00000489180 PAXIP1Q6ZW49 1069 aaPredicted RBP19.77■□□□□ 0.76
NPHP4-209ENST00000489180 SPATA24Q86W54 205 aa19.77■□□□□ 0.76
NPHP4-209ENST00000489180 ARFGAP2Q8N6H7 521 aa19.77■□□□□ 0.76
NPHP4-209ENST00000489180 SEC62Q99442 399 aaKnown RBP19.77■□□□□ 0.76
NPHP4-209ENST00000489180 DEXIO95424 95 aa19.77■□□□□ 0.75
NPHP4-209ENST00000489180 JAKMIP2Q96AA8 810 aa19.77■□□□□ 0.75
NPHP4-209ENST00000489180 GPCPD1Q9NPB8 672 aa19.77■□□□□ 0.75
NPHP4-209ENST00000489180 MAP3K19Q56UN5 1328 aa19.76■□□□□ 0.75
NPHP4-209ENST00000489180 ZNF202O95125 648 aa19.76■□□□□ 0.75
NPHP4-209ENST00000489180 IL2RBP14784 551 aa19.76■□□□□ 0.75
NPHP4-209ENST00000489180 MYRIPQ8NFW9 859 aa19.76■□□□□ 0.75
NPHP4-209ENST00000489180 PHKBQ93100 1093 aa19.76■□□□□ 0.75
NPHP4-209ENST00000489180 CALCOCO2Q13137 446 aa19.76■□□□□ 0.75
NPHP4-209ENST00000489180 PRDM1O75626 825 aa19.76■□□□□ 0.75
NPHP4-209ENST00000489180 CCNT1O60563 726 aaKnown RBP19.76■□□□□ 0.75
NPHP4-209ENST00000489180 TRAF1Q13077 416 aa19.76■□□□□ 0.75
NPHP4-209ENST00000489180 SMAP1Q8IYB5 467 aaPredicted RBP19.76■□□□□ 0.75
NPHP4-209ENST00000489180 SEL1L2Q5TEA6 688 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 C8orf74Q6P047 294 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 XAGE2Q96GT9 111 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 RASSF4Q9H2L5 321 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 DDX21Q9NR30 783 aaKnown RBP eCLIP19.75■□□□□ 0.75
NPHP4-209ENST00000489180 TMEM63CQ9P1W3 806 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 WWC3Q9ULE0 1092 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 NLRP12P59046 1061 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 CTDSPL2Q05D32 466 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 MRRFQ96E11 262 aaKnown RBP19.75■□□□□ 0.75
NPHP4-209ENST00000489180 USP19O94966 1318 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 EYA2O00167 538 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 VIMP08670 466 aaKnown RBP19.75■□□□□ 0.75
NPHP4-209ENST00000489180 ITGA6P23229 1130 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 CCDC65Q8IXS2 484 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 DIS3L2Q8IYB7 885 aaKnown RBP19.75■□□□□ 0.75
NPHP4-209ENST00000489180 EIF6P56537 245 aaKnown RBP19.75■□□□□ 0.75
NPHP4-209ENST00000489180 PSMB7Q99436 277 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 TTF2Q9UNY4 1162 aaKnown RBP19.75■□□□□ 0.75
NPHP4-209ENST00000489180 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
NPHP4-209ENST00000489180 PABPN1LA6NDY0 278 aaKnown RBP19.74■□□□□ 0.75
NPHP4-209ENST00000489180 TAB2Q9NYJ8 693 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 UHRF1BP1LA0JNW5 1464 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 KRT5P13647 590 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 CSGALNACT2Q8N6G5 542 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 TSC1Q92574 1164 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 DCAF5Q96JK2 942 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 UIMC1Q96RL1 719 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 MPHOSPH6Q99547 160 aaKnown RBP19.74■□□□□ 0.75
NPHP4-209ENST00000489180 LLPHQ9BRT6 129 aaKnown RBP19.74■□□□□ 0.75
NPHP4-209ENST00000489180 CHMP2AO43633 222 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 PLCD1P51178 756 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 MTX1Q13505 466 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 MTUS1Q9ULD2 1270 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 GPAA1O43292 621 aa19.74■□□□□ 0.75
NPHP4-209ENST00000489180 UAP1Q16222 522 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms