RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 ALX1Q15699 326 aa13.74□□□□□ -0.21
CMSS1-205ENST00000489081 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
CMSS1-205ENST00000489081 RSBN1LQ6PCB5 846 aaPredicted RBP13.74□□□□□ -0.21
CMSS1-205ENST00000489081 ARHGAP27Q6ZUM4 889 aa13.74□□□□□ -0.21
CMSS1-205ENST00000489081 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
CMSS1-205ENST00000489081 EPB41L4AQ9HCS5 686 aaPredicted RBP13.74□□□□□ -0.21
CMSS1-205ENST00000489081 AATFQ9NY61 560 aaKnown RBP eCLIP13.74□□□□□ -0.21
CMSS1-205ENST00000489081 SLC4A4Q9Y6R1 1079 aa13.74□□□□□ -0.21
CMSS1-205ENST00000489081 SCN9AQ15858 1988 aa13.74□□□□□ -0.21
CMSS1-205ENST00000489081 GPR75-ASB3A0A0A6YYF3 556 aa13.73□□□□□ -0.21
CMSS1-205ENST00000489081 BAG3O95817 575 aa13.73□□□□□ -0.21
CMSS1-205ENST00000489081 YBX3P16989 372 aaKnown RBP eCLIP13.73□□□□□ -0.213e-9■■■□□ 15.9
CMSS1-205ENST00000489081 TSGA10IPQ3SY00 556 aa13.73□□□□□ -0.21
CMSS1-205ENST00000489081 MRIQ9BWK5 157 aa13.73□□□□□ -0.21
CMSS1-205ENST00000489081 CTNNA3Q9UI47 895 aa13.73□□□□□ -0.21
CMSS1-205ENST00000489081 DAGLAQ9Y4D2 1042 aa13.73□□□□□ -0.21
CMSS1-205ENST00000489081 ZMYM6O95789 1325 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 MYO3BQ8WXR4 1341 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 ZNF646O15015 1829 aaPredicted RBP13.72□□□□□ -0.21
CMSS1-205ENST00000489081 APPP05067 770 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 CYP21A2P08686 494 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 ZKSCAN1P17029 563 aaPredicted RBP13.72□□□□□ -0.21
CMSS1-205ENST00000489081 BTDP43251 543 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 SCNN1DP51172 638 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 HDLBPQ00341 1268 aaKnown RBP13.72□□□□□ -0.21
CMSS1-205ENST00000489081 CXCL9Q07325 125 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 RABEP1Q15276 862 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 CIAPIN1Q6FI81 312 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 HHIPL2Q6UWX4 724 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 CERS3Q8IU89 383 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 KIAA0825Q8IV33 1275 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 IFNL3Q8IZI9 196 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 SDR42E1Q8WUS8 393 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 GMLQ99445 158 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 NOL10Q9BSC4 688 aaKnown RBP13.72□□□□□ -0.21
CMSS1-205ENST00000489081 CRNKL1Q9BZJ0 848 aaKnown RBP13.72□□□□□ -0.21
CMSS1-205ENST00000489081 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
CMSS1-205ENST00000489081 TAF6LQ9Y6J9 622 aa13.72□□□□□ -0.21
CMSS1-205ENST00000489081 CRKP46108 304 aa13.71□□□□□ -0.21
CMSS1-205ENST00000489081 RHBDL3P58872 404 aa13.71□□□□□ -0.21
CMSS1-205ENST00000489081 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.21
CMSS1-205ENST00000489081 SH3RF3Q8TEJ3 882 aaPredicted RBP13.71□□□□□ -0.21
CMSS1-205ENST00000489081 TEKT1Q969V4 418 aa13.71□□□□□ -0.21
CMSS1-205ENST00000489081 NACAP1Q9BZK3 213 aa13.71□□□□□ -0.21
CMSS1-205ENST00000489081 CCDC88AQ3V6T2 1871 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 FZD9O00144 591 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 PLCG2P16885 1265 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 LMNB1P20700 586 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 TNIP1Q15025 636 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 IMMTQ16891 758 aaKnown RBP13.7□□□□□ -0.22
CMSS1-205ENST00000489081 ADCK5Q3MIX3 580 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 AGBL3Q8NEM8 1001 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 DDRGK1Q96HY6 314 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 ZDHHC15Q96MV8 337 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 TM6SF1Q9BZW5 370 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 NAPBQ9H115 298 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 ATP8A2Q9NTI2 1148 aa13.7□□□□□ -0.22
CMSS1-205ENST00000489081 ZNF213O14771 459 aa13.69□□□□□ -0.22
CMSS1-205ENST00000489081 TDO2P48775 406 aa13.69□□□□□ -0.22
CMSS1-205ENST00000489081 HAND2P61296 217 aa13.69□□□□□ -0.22
CMSS1-205ENST00000489081 KRT32Q14532 448 aa13.69□□□□□ -0.22
CMSS1-205ENST00000489081 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
CMSS1-205ENST00000489081 JAKMIP1Q96N16 626 aaKnown RBP13.69□□□□□ -0.22
CMSS1-205ENST00000489081 DCP1AQ9NPI6 582 aaPredicted RBP13.69□□□□□ -0.22
CMSS1-205ENST00000489081 MKRN1Q9UHC7 482 aaKnown RBP13.69□□□□□ -0.22
CMSS1-205ENST00000489081 SERPINA10Q9UK55 444 aa13.69□□□□□ -0.22
CMSS1-205ENST00000489081 PSME4Q14997 1843 aa13.69□□□□□ -0.22
CMSS1-205ENST00000489081 PSMA5P28066 241 aa13.68□□□□□ -0.22
CMSS1-205ENST00000489081 EIF6P56537 245 aaKnown RBP13.68□□□□□ -0.22
CMSS1-205ENST00000489081 STOX1Q6ZVD7 989 aa13.68□□□□□ -0.22
CMSS1-205ENST00000489081 TEX11Q8IYF3 940 aa13.68□□□□□ -0.22
CMSS1-205ENST00000489081 SNX21Q969T3 373 aa13.68□□□□□ -0.22
CMSS1-205ENST00000489081 UPF3BQ9BZI7 483 aaKnown RBP13.68□□□□□ -0.22
CMSS1-205ENST00000489081 ZSWIM6Q9HCJ5 1215 aa13.68□□□□□ -0.22
CMSS1-205ENST00000489081 MYH2Q9UKX2 1941 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 E7EWF7 191 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 RPS12P25398 132 aaKnown RBP13.67□□□□□ -0.22
CMSS1-205ENST00000489081 USP5P45974 858 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 NEK4P51957 841 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 CFAP100Q494V2 611 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 CDC42EP5Q6NZY7 148 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 TBC1D10CQ8IV04 446 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 IL27Q8NEV9 243 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 TGFBRAP1Q8WUH2 860 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 HDAC9Q9UKV0 1011 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 PCDHAC2Q9Y5I4 1007 aa13.67□□□□□ -0.22
CMSS1-205ENST00000489081 ZNF541Q9H0D2 1346 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 USP17L12C9JPN9 530 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 USP17L21D6R901 530 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
CMSS1-205ENST00000489081 USP17L8P0C7I0 530 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
CMSS1-205ENST00000489081 RBM5P52756 815 aaKnown RBP eCLIP13.66□□□□□ -0.22
CMSS1-205ENST00000489081 PPARAQ07869 468 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 COL9A3Q14050 684 aaPredicted RBP13.66□□□□□ -0.22
CMSS1-205ENST00000489081 SBK1Q52WX2 424 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 RUFY3Q7L099 469 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms