RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 OVOS2A0A0G2JMS6 1433 aa11.01□□□□□ -0.65
TRAPPC12-221ENST00000489032 OVOS2A0A0J9YW53 1432 aa11.01□□□□□ -0.65
TRAPPC12-221ENST00000489032 OVOS2Q6IE36 1432 aa11.01□□□□□ -0.65
TRAPPC12-221ENST00000489032 SSH2Q76I76 1423 aa11.01□□□□□ -0.65
TRAPPC12-221ENST00000489032 SBF2Q86WG5 1849 aa11□□□□□ -0.65
TRAPPC12-221ENST00000489032 OPLAHO14841 1288 aa11□□□□□ -0.65
TRAPPC12-221ENST00000489032 FZD6O60353 706 aa11□□□□□ -0.65
TRAPPC12-221ENST00000489032 KCNH4Q9UQ05 1017 aa11□□□□□ -0.65
TRAPPC12-221ENST00000489032 THRAP3Q9Y2W1 955 aaKnown RBP11□□□□□ -0.65
TRAPPC12-221ENST00000489032 SHANK3Q9BYB0 1731 aa11□□□□□ -0.65
TRAPPC12-221ENST00000489032 PARP4Q9UKK3 1724 aaKnown RBP11□□□□□ -0.65
TRAPPC12-221ENST00000489032 POLR3AO14802 1390 aaPredicted RBP11□□□□□ -0.65
TRAPPC12-221ENST00000489032 BRD4O60885 1362 aaPredicted RBP11□□□□□ -0.65
TRAPPC12-221ENST00000489032 PDGFAP04085 211 aa10.99□□□□□ -0.65
TRAPPC12-221ENST00000489032 HSPA6P17066 643 aa10.99□□□□□ -0.65
TRAPPC12-221ENST00000489032 ZC3H6P61129 1189 aaKnown RBP10.99□□□□□ -0.65
TRAPPC12-221ENST00000489032 EHHADHQ08426 723 aa10.99□□□□□ -0.65
TRAPPC12-221ENST00000489032 LAMC2Q13753 1193 aa10.99□□□□□ -0.65
TRAPPC12-221ENST00000489032 SLC15A2Q16348 729 aa10.99□□□□□ -0.65
TRAPPC12-221ENST00000489032 NPAS3Q8IXF0 933 aa10.99□□□□□ -0.65
TRAPPC12-221ENST00000489032 SLC16A10Q8TF71 515 aa10.99□□□□□ -0.65
TRAPPC12-221ENST00000489032 MARK1Q9P0L2 795 aa10.99□□□□□ -0.65
TRAPPC12-221ENST00000489032 ATXN7L1Q9ULK2 861 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC12-221ENST00000489032 BNIP3LO60238 219 aa10.98□□□□□ -0.65
TRAPPC12-221ENST00000489032 MAPTP10636 758 aaKnown RBP10.98□□□□□ -0.65
TRAPPC12-221ENST00000489032 ABHD17AQ96GS6 310 aa10.98□□□□□ -0.65
TRAPPC12-221ENST00000489032 CFHR5Q9BXR6 569 aa10.98□□□□□ -0.65
TRAPPC12-221ENST00000489032 SLC12A5Q9H2X9 1139 aa10.98□□□□□ -0.65
TRAPPC12-221ENST00000489032 USP20Q9Y2K6 914 aa10.98□□□□□ -0.65
TRAPPC12-221ENST00000489032 PEAK1Q9H792 1746 aa10.98□□□□□ -0.65
TRAPPC12-221ENST00000489032 ERCC3P19447 782 aa10.97□□□□□ -0.65
TRAPPC12-221ENST00000489032 VEGFBP49765 207 aa10.97□□□□□ -0.65
TRAPPC12-221ENST00000489032 TNP2Q05952 138 aa10.97□□□□□ -0.65
TRAPPC12-221ENST00000489032 NANOS1Q8WY41 292 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-221ENST00000489032 RBCK1Q9BYM8 510 aa10.97□□□□□ -0.65
TRAPPC12-221ENST00000489032 KTN1Q86UP2 1357 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-221ENST00000489032 PHRF1Q9P1Y6 1649 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-221ENST00000489032 USP6P35125 1406 aa10.96□□□□□ -0.65
TRAPPC12-221ENST00000489032 GPR25O00155 361 aa10.96□□□□□ -0.65
TRAPPC12-221ENST00000489032 THBS1P07996 1170 aa10.96□□□□□ -0.65
TRAPPC12-221ENST00000489032 SFSWAPQ12872 951 aaKnown RBP10.96□□□□□ -0.65
TRAPPC12-221ENST00000489032 TXNRD1Q16881 649 aa10.96□□□□□ -0.65
TRAPPC12-221ENST00000489032 DMRTB1Q96MA1 342 aa10.96□□□□□ -0.65
TRAPPC12-221ENST00000489032 PNMA5Q96PV4 448 aa10.96□□□□□ -0.65
TRAPPC12-221ENST00000489032 TTC21AQ8NDW8 1320 aa10.95□□□□□ -0.66
TRAPPC12-221ENST00000489032 FGFR3P22607 806 aa10.95□□□□□ -0.66
TRAPPC12-221ENST00000489032 ASB16Q96NS5 453 aa10.95□□□□□ -0.66
TRAPPC12-221ENST00000489032 C11orf16Q9NQ32 467 aa10.95□□□□□ -0.66
TRAPPC12-221ENST00000489032 CPSF1Q10570 1443 aaKnown RBP10.94□□□□□ -0.66
TRAPPC12-221ENST00000489032 EFSO43281 561 aa10.94□□□□□ -0.66
TRAPPC12-221ENST00000489032 XYLBO75191 536 aa10.94□□□□□ -0.66
TRAPPC12-221ENST00000489032 NEFLP07196 543 aa10.94□□□□□ -0.66
TRAPPC12-221ENST00000489032 KCNQ4P56696 695 aa10.94□□□□□ -0.66
TRAPPC12-221ENST00000489032 UBAP2LQ14157 1087 aaKnown RBP10.94□□□□□ -0.66
TRAPPC12-221ENST00000489032 DDB1Q16531 1140 aa10.94□□□□□ -0.66
TRAPPC12-221ENST00000489032 PTF1AQ7RTS3 328 aa10.94□□□□□ -0.66
TRAPPC12-221ENST00000489032 NLRP13Q86W25 1043 aa10.94□□□□□ -0.66
TRAPPC12-221ENST00000489032 ANKRD36BQ8N2N9 1353 aa10.93□□□□□ -0.66
TRAPPC12-221ENST00000489032 TTC21BQ7Z4L5 1316 aa10.93□□□□□ -0.66
TRAPPC12-221ENST00000489032 GRIN3BO60391 1043 aa10.93□□□□□ -0.66
TRAPPC12-221ENST00000489032 CD33P20138 364 aa10.93□□□□□ -0.66
TRAPPC12-221ENST00000489032 CCINQ13939 588 aa10.93□□□□□ -0.66
TRAPPC12-221ENST00000489032 ZNF438Q7Z4V0 828 aa10.93□□□□□ -0.66
TRAPPC12-221ENST00000489032 NDFIP2Q9NV92 336 aa10.93□□□□□ -0.66
TRAPPC12-221ENST00000489032 PRR12Q9ULL5 1215 aa10.93□□□□□ -0.66
TRAPPC12-221ENST00000489032 NSFL1CQ9UNZ2 370 aaKnown RBP10.93□□□□□ -0.66
TRAPPC12-221ENST00000489032 AKAP12Q02952 1782 aa10.93□□□□□ -0.66
TRAPPC12-221ENST00000489032 EDC4Q6P2E9 1401 aaKnown RBP10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 ATP10DQ9P241 1426 aa10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 A0A1W2PP64 1363 aa10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 LRRC37A3O60309 1634 aa10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 GOLGB1Q14789 3259 aaKnown RBP10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 ANKRD33BA6NCL7 494 aa10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 NUTM2GQ5VZR2 741 aa10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 TMC7Q7Z402 723 aa10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 GJD3Q8N144 294 aa10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 LMO7Q8WWI1 1683 aa10.92□□□□□ -0.66
TRAPPC12-221ENST00000489032 H3BM21 787 aa10.91□□□□□ -0.66
TRAPPC12-221ENST00000489032 TERTO14746 1132 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-221ENST00000489032 POLD1P28340 1107 aa10.91□□□□□ -0.66
TRAPPC12-221ENST00000489032 PLCB3Q01970 1234 aa10.91□□□□□ -0.66
TRAPPC12-221ENST00000489032 PDE12Q6L8Q7 609 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-221ENST00000489032 GGNBP2Q9H3C7 697 aa10.91□□□□□ -0.66
TRAPPC12-221ENST00000489032 KCNMB2Q9Y691 235 aa10.91□□□□□ -0.66
TRAPPC12-221ENST00000489032 MON2Q7Z3U7 1717 aa10.91□□□□□ -0.66
TRAPPC12-221ENST00000489032 CRB1P82279 1406 aa10.91□□□□□ -0.66
TRAPPC12-221ENST00000489032 CPDO75976 1380 aa10.9□□□□□ -0.66
TRAPPC12-221ENST00000489032 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.66
TRAPPC12-221ENST00000489032 KIF7Q2M1P5 1343 aa10.9□□□□□ -0.66
TRAPPC12-221ENST00000489032 CD163L1Q9NR16 1453 aa10.9□□□□□ -0.66
TRAPPC12-221ENST00000489032 BMP4P12644 408 aa10.9□□□□□ -0.66
TRAPPC12-221ENST00000489032 MX2P20592 715 aa10.9□□□□□ -0.66
TRAPPC12-221ENST00000489032 SPEM2Q0P670 501 aa10.9□□□□□ -0.66
TRAPPC12-221ENST00000489032 KRT25Q7Z3Z0 450 aa10.9□□□□□ -0.66
TRAPPC12-221ENST00000489032 EFCC1Q9HA90 598 aa10.9□□□□□ -0.66
TRAPPC12-221ENST00000489032 BCL9O00512 1426 aa10.9□□□□□ -0.66
TRAPPC12-221ENST00000489032 COL5A2P05997 1499 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-221ENST00000489032 EGFRP00533 1210 aa10.89□□□□□ -0.67
TRAPPC12-221ENST00000489032 TTC39BQ5VTQ0 682 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms