RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 SNAPC2Q13487 334 aa14.38□□□□□ -0.11
USP11-210ENST00000489030 RABL6Q3YEC7 729 aaPredicted RBP14.38□□□□□ -0.11
USP11-210ENST00000489030 METTL24Q5JXM2 366 aa14.38□□□□□ -0.11
USP11-210ENST00000489030 C17orf99Q6UX52 265 aa14.38□□□□□ -0.11
USP11-210ENST00000489030 CHRDL2Q6WN34 429 aa14.38□□□□□ -0.11
USP11-210ENST00000489030 NBPF11Q86T75 865 aa14.38□□□□□ -0.11
USP11-210ENST00000489030 TEKT1Q969V4 418 aa14.38□□□□□ -0.11
USP11-210ENST00000489030 SLURP2P0DP57 97 aa14.37□□□□□ -0.11
USP11-210ENST00000489030 FGFR2P21802 821 aa14.37□□□□□ -0.11
USP11-210ENST00000489030 OSBPP22059 807 aa14.37□□□□□ -0.11
USP11-210ENST00000489030 HDLBPQ00341 1268 aaKnown RBP14.37□□□□□ -0.11
USP11-210ENST00000489030 NFIAQ12857 509 aa14.37□□□□□ -0.11
USP11-210ENST00000489030 PPIL2Q13356 520 aa14.37□□□□□ -0.11
USP11-210ENST00000489030 VPS37DQ86XT2 251 aa14.37□□□□□ -0.11
USP11-210ENST00000489030 ZFPM1Q8IX07 1006 aa14.37□□□□□ -0.11
USP11-210ENST00000489030 PDE8BO95263 885 aa14.36□□□□□ -0.11
USP11-210ENST00000489030 PSMC4P43686 418 aa14.36□□□□□ -0.11
USP11-210ENST00000489030 TCP10Q12799 353 aa14.36□□□□□ -0.11
USP11-210ENST00000489030 DIXDC1Q155Q3 683 aa14.36□□□□□ -0.11
USP11-210ENST00000489030 ALDH1L2Q3SY69 923 aa14.36□□□□□ -0.11
USP11-210ENST00000489030 FAM83AQ86UY5 434 aa14.36□□□□□ -0.11
USP11-210ENST00000489030 RANBP2P49792 3224 aaKnown RBP14.36□□□□□ -0.11
USP11-210ENST00000489030 SZT2Q5T011 3432 aa14.35□□□□□ -0.11
USP11-210ENST00000489030 PDHXO00330 501 aa14.35□□□□□ -0.11
USP11-210ENST00000489030 FRAT2O75474 233 aaPredicted RBP14.35□□□□□ -0.11
USP11-210ENST00000489030 CDC42EP5Q6NZY7 148 aa14.35□□□□□ -0.11
USP11-210ENST00000489030 UBE2Q1Q7Z7E8 422 aa14.35□□□□□ -0.11
USP11-210ENST00000489030 TBC1D22AQ8WUA7 517 aa14.35□□□□□ -0.11
USP11-210ENST00000489030 RBM27Q9P2N5 1060 aaKnown RBP14.35□□□□□ -0.11
USP11-210ENST00000489030 SRRDQ9UH36 339 aa14.35□□□□□ -0.11
USP11-210ENST00000489030 DAGLAQ9Y4D2 1042 aa14.35□□□□□ -0.11
USP11-210ENST00000489030 CYP2C8P10632 490 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 RFX5P48382 616 aaPredicted RBP14.34□□□□□ -0.11
USP11-210ENST00000489030 KIF22Q14807 665 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 ARHGEF6Q15052 776 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 CAVIN4Q5BKX8 364 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 FKBP1CQ5VVH2 108 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 GPAT2Q6NUI2 795 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 HHIPL2Q6UWX4 724 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 ANKRD23Q86SG2 305 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 MRPL50Q8N5N7 158 aaKnown RBP14.34□□□□□ -0.11
USP11-210ENST00000489030 MRIQ9BWK5 157 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 ZNF341Q9BYN7 854 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 ZCCHC17Q9NP64 241 aaKnown RBP14.34□□□□□ -0.11
USP11-210ENST00000489030 FAM198AQ9UFP1 575 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 ZNF112Q9UJU3 913 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 RCAN3Q9UKA8 241 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 KCNH4Q9UQ05 1017 aa14.34□□□□□ -0.11
USP11-210ENST00000489030 RPAP1Q9BWH6 1393 aaPredicted RBP14.34□□□□□ -0.11
USP11-210ENST00000489030 CCL5P13501 91 aa14.33□□□□□ -0.12
USP11-210ENST00000489030 PRDX5P30044 214 aa14.33□□□□□ -0.12
USP11-210ENST00000489030 RARSP54136 660 aaKnown RBP14.33□□□□□ -0.12
USP11-210ENST00000489030 PRKCZQ05513 592 aa14.33□□□□□ -0.12
USP11-210ENST00000489030 PPATQ06203 517 aa14.33□□□□□ -0.12
USP11-210ENST00000489030 USP44Q9H0E7 712 aa14.33□□□□□ -0.12
USP11-210ENST00000489030 TMOD2Q9NZR1 351 aa14.33□□□□□ -0.12
USP11-210ENST00000489030 GABRQQ9UN88 632 aa14.33□□□□□ -0.12
USP11-210ENST00000489030 GRK4P32298 578 aa14.32□□□□□ -0.12
USP11-210ENST00000489030 PUM3Q15397 648 aaKnown RBP14.32□□□□□ -0.12
USP11-210ENST00000489030 DCAF15Q66K64 600 aa14.32□□□□□ -0.12
USP11-210ENST00000489030 ATG9AQ7Z3C6 839 aa14.32□□□□□ -0.12
USP11-210ENST00000489030 FAM151AQ8WW52 585 aa14.32□□□□□ -0.12
USP11-210ENST00000489030 DPF3Q92784 378 aa14.32□□□□□ -0.12
USP11-210ENST00000489030 PRO3102Q9H379 93 aa14.32□□□□□ -0.12
USP11-210ENST00000489030 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.32□□□□□ -0.12
USP11-210ENST00000489030 MYPNQ86TC9 1320 aa14.32□□□□□ -0.12
USP11-210ENST00000489030 FMNL1O95466 1100 aaPredicted RBP14.31□□□□□ -0.12
USP11-210ENST00000489030 BCRP11274 1271 aa14.31□□□□□ -0.12
USP11-210ENST00000489030 SH3BP5LQ7L8J4 393 aa14.31□□□□□ -0.12
USP11-210ENST00000489030 RAET1EQ8TD07 263 aa14.31□□□□□ -0.12
USP11-210ENST00000489030 SSH1Q8WYL5 1049 aa14.31□□□□□ -0.12
USP11-210ENST00000489030 UNC93B1Q9H1C4 597 aa14.31□□□□□ -0.12
USP11-210ENST00000489030 ATRNL1Q5VV63 1379 aa14.31□□□□□ -0.12
USP11-210ENST00000489030 PHF20L1A8MW92 1017 aa14.3□□□□□ -0.12
USP11-210ENST00000489030 GNRH1P01148 92 aa14.3□□□□□ -0.12
USP11-210ENST00000489030 GJA8P48165 433 aa14.3□□□□□ -0.12
USP11-210ENST00000489030 PRMT2P55345 433 aa14.3□□□□□ -0.12
USP11-210ENST00000489030 NOL9Q5SY16 702 aaKnown RBP14.3□□□□□ -0.12
USP11-210ENST00000489030 CCDC84Q86UT8 332 aaPredicted RBP14.3□□□□□ -0.12
USP11-210ENST00000489030 RNF208Q9H0X6 261 aa14.3□□□□□ -0.12
USP11-210ENST00000489030 SMC4Q9NTJ3 1288 aa14.3□□□□□ -0.12
USP11-210ENST00000489030 SUGT1Q9Y2Z0 365 aa14.3□□□□□ -0.12
USP11-210ENST00000489030 EYA2O00167 538 aa14.29□□□□□ -0.12
USP11-210ENST00000489030 WDHD1O75717 1129 aaPredicted RBP14.29□□□□□ -0.12
USP11-210ENST00000489030 GJB1P08034 283 aa14.29□□□□□ -0.12
USP11-210ENST00000489030 IFIT1P09914 478 aaKnown RBP14.29□□□□□ -0.12
USP11-210ENST00000489030 USP40Q9NVE5 1235 aa14.29□□□□□ -0.12
USP11-210ENST00000489030 MAST3O60307 1309 aa14.29□□□□□ -0.12
USP11-210ENST00000489030 KIF16BQ96L93 1317 aa14.29□□□□□ -0.12
USP11-210ENST00000489030 SOX1O00570 391 aaPredicted RBP14.28□□□□□ -0.12
USP11-210ENST00000489030 BCAR3O75815 825 aa14.28□□□□□ -0.12
USP11-210ENST00000489030 ELNP15502 786 aa14.28□□□□□ -0.12
USP11-210ENST00000489030 ADORA1P30542 326 aa14.28□□□□□ -0.12
USP11-210ENST00000489030 PHKA1P46020 1223 aa14.28□□□□□ -0.12
USP11-210ENST00000489030 U2AF1L4Q8WU68 220 aaKnown RBP14.28□□□□□ -0.12
USP11-210ENST00000489030 HOOK2Q96ED9 719 aa14.28□□□□□ -0.12
USP11-210ENST00000489030 SIL1Q9H173 461 aa14.28□□□□□ -0.12
USP11-210ENST00000489030 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
USP11-210ENST00000489030 BIN2Q9UBW5 565 aaPredicted RBP14.28□□□□□ -0.12
USP11-210ENST00000489030 ZBTB7BO15156 539 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms