RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 TBC1D2BQ9UPU7 963 aa7.85□□□□□ -1.15
HDLBP-243ENST00000488923 ZDHHC9Q9Y397 364 aa7.85□□□□□ -1.15
HDLBP-243ENST00000488923 ARIH1Q9Y4X5 557 aaPredicted RBP7.85□□□□□ -1.15
HDLBP-243ENST00000488923 ANKRD36CQ5JPF3 1778 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 UBAP1LF5GYI3 381 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 TNFRSF10AO00220 468 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 PPEF1O14829 653 aaPredicted RBP7.84□□□□□ -1.15
HDLBP-243ENST00000488923 WIPF1O43516 503 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 IGSF3O75054 1194 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 PRPF40AO75400 957 aaKnown RBP7.84□□□□□ -1.15
HDLBP-243ENST00000488923 CAMTA2O94983 1202 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 ARID4AP29374 1257 aaPredicted RBP7.84□□□□□ -1.15
HDLBP-243ENST00000488923 FGD1P98174 961 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 FKBP4Q02790 459 aaKnown RBP eCLIP7.84□□□□□ -1.15
HDLBP-243ENST00000488923 UBE3CQ15386 1083 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 IMMTQ16891 758 aaKnown RBP7.84□□□□□ -1.15
HDLBP-243ENST00000488923 TMED8Q6PL24 325 aaPredicted RBP7.84□□□□□ -1.15
HDLBP-243ENST00000488923 DHX32Q7L7V1 743 aaKnown RBP7.84□□□□□ -1.15
HDLBP-243ENST00000488923 FBXL16Q8N461 479 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 EDC3Q96F86 508 aaKnown RBP7.84□□□□□ -1.15
HDLBP-243ENST00000488923 MPHOSPH8Q99549 860 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 PUS3Q9BZE2 481 aaKnown RBP7.84□□□□□ -1.15
HDLBP-243ENST00000488923 NYXQ9GZU5 481 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 GZF1Q9H116 711 aaPredicted RBP7.84□□□□□ -1.15
HDLBP-243ENST00000488923 GREM2Q9H772 168 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 GRPEL1Q9HAV7 217 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 RIC1Q4ADV7 1423 aa7.84□□□□□ -1.15
HDLBP-243ENST00000488923 MAST3O60307 1309 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 UBN2Q6ZU65 1347 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 WDR19Q8NEZ3 1342 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 LRP5O75197 1615 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 DHX16O60231 1041 aaKnown RBP7.83□□□□□ -1.16
HDLBP-243ENST00000488923 S1PR4O95977 384 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 F13A1P00488 732 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 SYT1P21579 422 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 GJB2P29033 226 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 HMGN5P82970 282 aaKnown RBP7.83□□□□□ -1.16
HDLBP-243ENST00000488923 PKP1Q13835 747 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 ME3Q16798 604 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 SUSD4Q5VX71 490 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 CCDC83Q8IWF9 413 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 CRIPAKQ8N1N5 446 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 VGLL2Q8N8G2 317 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 RGS22Q8NE09 1264 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 AGXT2Q9BYV1 514 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 NIP7Q9Y221 180 aaKnown RBP eCLIP7.83□□□□□ -1.16
HDLBP-243ENST00000488923 ATRNO75882 1429 aa7.83□□□□□ -1.16
HDLBP-243ENST00000488923 NTSR2O95665 410 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 CYP21A2P08686 494 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 HSPD1P10809 573 aaKnown RBP7.82□□□□□ -1.16
HDLBP-243ENST00000488923 FGFR2P21802 821 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 ADD2P35612 726 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 UBE2HP62256 183 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 MAP3K12Q12852 859 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 ITPK1Q13572 414 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 WASHC4Q2M389 1173 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 LARP1BQ659C4 914 aaKnown RBP7.82□□□□□ -1.16
HDLBP-243ENST00000488923 ZNF274Q96GC6 653 aaPredicted RBP7.82□□□□□ -1.16
HDLBP-243ENST00000488923 ACSBG1Q96GR2 724 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 GNL3LQ9NVN8 582 aaKnown RBP7.82□□□□□ -1.16
HDLBP-243ENST00000488923 TPCN1Q9ULQ1 816 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 CARMIL3Q8ND23 1372 aa7.82□□□□□ -1.16
HDLBP-243ENST00000488923 BCL9LQ86UU0 1499 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 ZMYM6O95789 1325 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 ZNF213O14771 459 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 RPS6KA4O75676 772 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 GNAT2P19087 354 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 ADORA1P30542 326 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 ZAP70P43403 619 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 TRDNQ13061 729 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 TOB2Q14106 344 aaPredicted RBP7.81□□□□□ -1.16
HDLBP-243ENST00000488923 SF3B3Q15393 1217 aaKnown RBP7.81□□□□□ -1.16
HDLBP-243ENST00000488923 E2F4Q16254 413 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 ZSCAN23Q3MJ62 389 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 SLC10A5Q5PT55 438 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 CCDC102BQ68D86 513 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 ATL3Q6DD88 541 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 CAVIN1Q6NZI2 390 aaKnown RBP7.81□□□□□ -1.16
HDLBP-243ENST00000488923 RALYLQ86SE5 291 aaKnown RBP7.81□□□□□ -1.16
HDLBP-243ENST00000488923 GTF3C6Q969F1 213 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 C8orf37Q96NL8 207 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 SEC62Q99442 399 aaKnown RBP7.81□□□□□ -1.16
HDLBP-243ENST00000488923 ZSCAN16Q9H4T2 348 aaPredicted RBP7.81□□□□□ -1.16
HDLBP-243ENST00000488923 USP21Q9UK80 565 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 MTMR6Q9Y217 621 aa7.81□□□□□ -1.16
HDLBP-243ENST00000488923 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.81□□□□□ -1.16
HDLBP-243ENST00000488923 ELP1O95163 1332 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 E7EWF7 191 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 SEMA3EO15041 775 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 GPAA1O43292 621 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 PFKFB2O60825 505 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 XRCC6P12956 609 aaKnown RBP eCLIP7.8□□□□□ -1.16
HDLBP-243ENST00000488923 CPA1P15085 419 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 MCM5P33992 734 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 EVCP57679 992 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 KRT85P78386 507 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 EXOSC10Q01780 885 aaKnown RBP7.8□□□□□ -1.16
HDLBP-243ENST00000488923 ALX1Q15699 326 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 PLA2G2CQ5R387 149 aa7.8□□□□□ -1.16
HDLBP-243ENST00000488923 CCDC129Q6ZRS4 1044 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms