RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 SNX21Q969T3 373 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 ZDHHC15Q96MV8 337 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 EPB41L4AQ9HCS5 686 aaPredicted RBP12.79□□□□□ -0.36
USP11-209ENST00000488848 ATP8A2Q9NTI2 1148 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 PPP1R1BQ9UD71 204 aaPredicted RBP12.79□□□□□ -0.36
USP11-209ENST00000488848 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 ROBO3Q96MS0 1386 aa12.79□□□□□ -0.36
USP11-209ENST00000488848 NAV1Q8NEY1 1877 aa12.78□□□□□ -0.36
USP11-209ENST00000488848 SLC27A2O14975 620 aa12.78□□□□□ -0.36
USP11-209ENST00000488848 BAG3O95817 575 aa12.78□□□□□ -0.36
USP11-209ENST00000488848 FGAP02671 866 aa12.78□□□□□ -0.36
USP11-209ENST00000488848 PRELPP51888 382 aa12.78□□□□□ -0.36
USP11-209ENST00000488848 RHBDL3P58872 404 aa12.78□□□□□ -0.36
USP11-209ENST00000488848 FBXL16Q8N461 479 aa12.78□□□□□ -0.36
USP11-209ENST00000488848 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
USP11-209ENST00000488848 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
USP11-209ENST00000488848 PALD1Q9ULE6 856 aa12.78□□□□□ -0.36
USP11-209ENST00000488848 DAGLAQ9Y4D2 1042 aa12.78□□□□□ -0.36
USP11-209ENST00000488848 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
USP11-209ENST00000488848 G3V3G9 751 aa12.77□□□□□ -0.37
USP11-209ENST00000488848 CYP21A2P08686 494 aa12.77□□□□□ -0.37
USP11-209ENST00000488848 FGRP09769 529 aa12.77□□□□□ -0.37
USP11-209ENST00000488848 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.37
USP11-209ENST00000488848 ZKSCAN1P17029 563 aaPredicted RBP12.77□□□□□ -0.37
USP11-209ENST00000488848 LMNB1P20700 586 aa12.77□□□□□ -0.37
USP11-209ENST00000488848 SBK1Q52WX2 424 aa12.77□□□□□ -0.37
USP11-209ENST00000488848 DCAF8Q5TAQ9 597 aa12.77□□□□□ -0.37
USP11-209ENST00000488848 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
USP11-209ENST00000488848 JDP2Q8WYK2 163 aa12.77□□□□□ -0.37
USP11-209ENST00000488848 CRNKL1Q9BZJ0 848 aaKnown RBP12.77□□□□□ -0.37
USP11-209ENST00000488848 NACAP1Q9BZK3 213 aa12.77□□□□□ -0.37
USP11-209ENST00000488848 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 ANP32AP39687 249 aaKnown RBP12.76□□□□□ -0.37
USP11-209ENST00000488848 ZNF280AP59817 542 aaPredicted RBP12.76□□□□□ -0.37
USP11-209ENST00000488848 CXCL9Q07325 125 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 TNIP1Q15025 636 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 DIXDC1Q155Q3 683 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 APOBEC3HQ6NTF7 200 aaKnown RBP12.76□□□□□ -0.37
USP11-209ENST00000488848 IFNL3Q8IZI9 196 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 DPF2Q92785 391 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 TEKT1Q969V4 418 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 ZBED3Q96IU2 234 aaPredicted RBP12.76□□□□□ -0.37
USP11-209ENST00000488848 ARMT1Q9H993 441 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 KCNQ5Q9NR82 932 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 TTF2Q9UNY4 1162 aaKnown RBP12.76□□□□□ -0.37
USP11-209ENST00000488848 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
USP11-209ENST00000488848 PSMD14O00487 310 aa12.75□□□□□ -0.37
USP11-209ENST00000488848 IMMTQ16891 758 aaKnown RBP12.75□□□□□ -0.37
USP11-209ENST00000488848 FKBP1CQ5VVH2 108 aa12.75□□□□□ -0.37
USP11-209ENST00000488848 CIAPIN1Q6FI81 312 aa12.75□□□□□ -0.37
USP11-209ENST00000488848 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
USP11-209ENST00000488848 MIGA1Q8NAN2 632 aa12.75□□□□□ -0.37
USP11-209ENST00000488848 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
USP11-209ENST00000488848 MTA3Q9BTC8 594 aa12.75□□□□□ -0.37
USP11-209ENST00000488848 DCP1AQ9NPI6 582 aaPredicted RBP12.75□□□□□ -0.37
USP11-209ENST00000488848 ARPP21Q9UBL0 812 aaPredicted RBP12.75□□□□□ -0.37
USP11-209ENST00000488848 JAG2Q9Y219 1238 aa12.75□□□□□ -0.37
USP11-209ENST00000488848 SLC4A4Q9Y6R1 1079 aa12.75□□□□□ -0.37
USP11-209ENST00000488848 BAZ2AQ9UIF9 1905 aaKnown RBP12.74□□□□□ -0.37
USP11-209ENST00000488848 HMGB1P09429 215 aaKnown RBP12.74□□□□□ -0.37
USP11-209ENST00000488848 YBX3P16989 372 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP11-209ENST00000488848 PSMA5P28066 241 aa12.74□□□□□ -0.37
USP11-209ENST00000488848 BTDP43251 543 aa12.74□□□□□ -0.37
USP11-209ENST00000488848 CRKP46108 304 aa12.74□□□□□ -0.37
USP11-209ENST00000488848 MCM2P49736 904 aa12.74□□□□□ -0.37
USP11-209ENST00000488848 RASSF7Q02833 373 aa12.74□□□□□ -0.37
USP11-209ENST00000488848 TTC14Q96N46 770 aa12.74□□□□□ -0.37
USP11-209ENST00000488848 NOL10Q9BSC4 688 aaKnown RBP12.74□□□□□ -0.37
USP11-209ENST00000488848 IDI2Q9BXS1 227 aa12.74□□□□□ -0.37
USP11-209ENST00000488848 AGXT2Q9BYV1 514 aa12.74□□□□□ -0.37
USP11-209ENST00000488848 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
USP11-209ENST00000488848 AATFQ9NY61 560 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP11-209ENST00000488848 ATRNL1Q5VV63 1379 aa12.73□□□□□ -0.37
USP11-209ENST00000488848 WDHD1O75717 1129 aaPredicted RBP12.73□□□□□ -0.37
USP11-209ENST00000488848 DYNLL1P63167 89 aaKnown RBP12.73□□□□□ -0.37
USP11-209ENST00000488848 STAG1Q8WVM7 1258 aa12.73□□□□□ -0.37
USP11-209ENST00000488848 NAPBQ9H115 298 aa12.73□□□□□ -0.37
USP11-209ENST00000488848 MYH1P12882 1939 aa12.72□□□□□ -0.37
USP11-209ENST00000488848 FLT1P17948 1338 aa12.72□□□□□ -0.37
USP11-209ENST00000488848 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
USP11-209ENST00000488848 PRKAB2O43741 272 aa12.72□□□□□ -0.37
USP11-209ENST00000488848 GRIN3BO60391 1043 aa12.72□□□□□ -0.37
USP11-209ENST00000488848 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
USP11-209ENST00000488848 STOX1Q6ZVD7 989 aa12.72□□□□□ -0.37
USP11-209ENST00000488848 GPC2Q8N158 579 aa12.72□□□□□ -0.37
USP11-209ENST00000488848 SH3RF3Q8TEJ3 882 aaPredicted RBP12.72□□□□□ -0.37
USP11-209ENST00000488848 MXD3Q9BW11 206 aa12.72□□□□□ -0.37
USP11-209ENST00000488848 TAF6LQ9Y6J9 622 aa12.72□□□□□ -0.37
USP11-209ENST00000488848 E7EWF7 191 aa12.71□□□□□ -0.37
USP11-209ENST00000488848 ZNF213O14771 459 aa12.71□□□□□ -0.37
USP11-209ENST00000488848 ORC4O43929 436 aa12.71□□□□□ -0.37
USP11-209ENST00000488848 ST18O60284 1047 aa12.71□□□□□ -0.37
USP11-209ENST00000488848 RAD17O75943 681 aa12.71□□□□□ -0.37
USP11-209ENST00000488848 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
USP11-209ENST00000488848 EIF6P56537 245 aaKnown RBP12.71□□□□□ -0.37
USP11-209ENST00000488848 EVCP57679 992 aa12.71□□□□□ -0.37
USP11-209ENST00000488848 ADCK5Q3MIX3 580 aa12.71□□□□□ -0.37
USP11-209ENST00000488848 CTR9Q6PD62 1173 aa12.71□□□□□ -0.37
USP11-209ENST00000488848 RUFY3Q7L099 469 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms