RNA–Protein interactions for RNA: ENST00000488741.5

CREM-238, Transcript of cAMP responsive element modulator, human

TSL 2 BASIC

Gene CREM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-238	ENST00000488741	STK32A	Q8WU08	396 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	PPP1R13B	Q96KQ4	1090 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	USB1	Q9BQ65	265 aa	Known RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	ZNF446	Q9NWS9	450 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	DNAI1	Q9UI46	699 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	FKBPL	Q9UIM3	349 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	ZMIZ1	Q9ULJ6	1067 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	CHMP3	Q9Y3E7	222 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	USP6	P35125	1406 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	MED1	Q15648	1581 aa	Predicted RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	MAP3K19	Q56UN5	1328 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	ADCY9	O60503	1353 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	MED23	Q9ULK4	1368 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	AGL	P35573	1532 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	ERICH4	A6NGS2	130 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	GNAT3	A8MTJ3	354 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	CBFA2T2	O43439	604 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	NPHP4	O75161	1426 aa	Predicted RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	ALDH1L1	O75891	902 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	F12	P00748	615 aa	Predicted RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	CPA1	P15085	419 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	CAPN2	P17655	700 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	SFPQ	P23246	707 aa	Known RBP eCLIP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	ETF1	P62495	437 aa	Known RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	TUBB4B	P68371	445 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	FAM160A1	Q05DH4	1040 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	PSME1	Q06323	249 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	TOB2	Q14106	344 aa	Predicted RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	TAF7	Q15545	349 aa	Predicted RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	ZRSR1	Q15695	479 aa	Known RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	ERCC6L	Q2NKX8	1250 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	ARHGAP29	Q52LW3	1261 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	TMEM164	Q5U3C3	297 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	USPL1	Q5W0Q7	1092 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	E4F1	Q66K89	784 aa	Predicted RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	DESI1	Q6ICB0	168 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	TICAM2	Q86XR7	235 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	SCUBE3	Q8IX30	993 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	ZNF687	Q8N1G0	1237 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	GPR161	Q8N6U8	529 aa	Known RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	IQUB	Q8NA54	791 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	SMARCC2	Q8TAQ2	1214 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	DNAAF4	Q8WXU2	420 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	BRF1	Q92994	677 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	GTF3C6	Q969F1	213 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	MPHOSPH8	Q99549	860 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	UBXN6	Q9BZV1	441 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	RASSF4	Q9H2L5	321 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	YY1AP1	Q9H869	796 aa		5.95	□□□□□ -1.46
CREM-238	ENST00000488741	TRMT1	Q9NXH9	659 aa	Known RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	ORC3	Q9UBD5	711 aa	Predicted RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	FEZ2	Q9UHY8	353 aa	Predicted RBP	5.95	□□□□□ -1.46
CREM-238	ENST00000488741	TSPOAP1	O95153	1857 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	NCAPD2	Q15021	1401 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741		A0A1W2PQ27	194 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741		A0A1W2PQ64	194 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741		A0A1W2PQD8	194 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	USP17L3	A6NCW0	530 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	USP17L4	A6NCW7	530 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	IKBKB	O14920	756 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	ZSCAN12	O43309	604 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	TADA3	O75528	432 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	IVL	P07476	585 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	HMGB1	P09429	215 aa	Known RBP	5.94	□□□□□ -1.46
CREM-238	ENST00000488741	PBX2	P40425	430 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	RAD51AP2	Q09MP3	1159 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	NMI	Q13287	307 aa	Predicted RBP	5.94	□□□□□ -1.46
CREM-238	ENST00000488741	NOM1	Q5C9Z4	860 aa	Known RBP	5.94	□□□□□ -1.46
CREM-238	ENST00000488741	BEND3	Q5T5X7	828 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	FAM173B	Q6P4H8	233 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	USP17L2	Q6R6M4	530 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	SYT10	Q6XYQ8	523 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	USP17L1	Q7RTZ2	530 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	HOMER1	Q86YM7	354 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	AOPEP	Q8N6M6	819 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	GOLGA6L1	Q8N7Z2	621 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	ENGASE	Q8NFI3	743 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	GOLGA5	Q8TBA6	731 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	RNF166	Q96A37	237 aa	Predicted RBP	5.94	□□□□□ -1.46
CREM-238	ENST00000488741	EXOC4	Q96A65	974 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	MIS18A	Q9NYP9	233 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	5.94	□□□□□ -1.46
CREM-238	ENST00000488741	HPS5	Q9UPZ3	1129 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	USP16	Q9Y5T5	823 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	USP54	Q70EL1	1684 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	RIMS1	Q86UR5	1692 aa	Known RBP	5.94	□□□□□ -1.46
CREM-238	ENST00000488741	SLIT1	O75093	1534 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	ABCC6	O95255	1503 aa		5.94	□□□□□ -1.46
CREM-238	ENST00000488741	KDM3B	Q7LBC6	1761 aa		5.93	□□□□□ -1.46
CREM-238	ENST00000488741	USP17L5	A8MUK1	530 aa		5.93	□□□□□ -1.46
CREM-238	ENST00000488741	PFKFB2	O60825	505 aa		5.93	□□□□□ -1.46
CREM-238	ENST00000488741	JUND	P17535	347 aa		5.93	□□□□□ -1.46
CREM-238	ENST00000488741	TNNT3	P45378	269 aa	Predicted RBP	5.93	□□□□□ -1.46
CREM-238	ENST00000488741	NLRP12	P59046	1061 aa		5.93	□□□□□ -1.46
CREM-238	ENST00000488741	PPP4C	P60510	307 aa		5.93	□□□□□ -1.46
CREM-238	ENST00000488741	TUBB2A	Q13885	445 aa		5.93	□□□□□ -1.46
CREM-238	ENST00000488741	ARID5B	Q14865	1188 aa		5.93	□□□□□ -1.46
CREM-238	ENST00000488741	BRD3	Q15059	726 aa		5.93	□□□□□ -1.46
CREM-238	ENST00000488741	HSP90AB2P	Q58FF8	381 aa		5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms