RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 HMMRO75330 724 aa17.46■□□□□ 0.39
COL9A2-208ENST00000488463 USP2O75604 605 aaPredicted RBP17.46■□□□□ 0.39
COL9A2-208ENST00000488463 MECOMQ03112 1051 aa17.46■□□□□ 0.39
COL9A2-208ENST00000488463 PRKG1Q13976 671 aa17.46■□□□□ 0.39
COL9A2-208ENST00000488463 SUPT20HL1Q3ZLR7 823 aa17.46■□□□□ 0.39
COL9A2-208ENST00000488463 ABCF2Q9UG63 623 aa17.46■□□□□ 0.39
COL9A2-208ENST00000488463 ANGEL1Q9UNK9 670 aaKnown RBP17.46■□□□□ 0.39
COL9A2-208ENST00000488463 RPAP1Q9BWH6 1393 aaPredicted RBP17.45■□□□□ 0.38
COL9A2-208ENST00000488463 CYP2E1P05181 493 aaPredicted RBP17.45■□□□□ 0.38
COL9A2-208ENST00000488463 LBX1P52954 281 aa17.45■□□□□ 0.38
COL9A2-208ENST00000488463 KIF23Q02241 960 aaPredicted RBP17.45■□□□□ 0.38
COL9A2-208ENST00000488463 NFIAQ12857 509 aa17.45■□□□□ 0.38
COL9A2-208ENST00000488463 HSP90AB4PQ58FF6 505 aa17.45■□□□□ 0.38
COL9A2-208ENST00000488463 SPTY2D1Q68D10 685 aaPredicted RBP17.45■□□□□ 0.38
COL9A2-208ENST00000488463 ARMC9Q7Z3E5 817 aa17.45■□□□□ 0.38
COL9A2-208ENST00000488463 NSUN4Q96CB9 384 aaKnown RBP17.45■□□□□ 0.38
COL9A2-208ENST00000488463 SNRKQ9NRH2 765 aa17.45■□□□□ 0.38
COL9A2-208ENST00000488463 FAM198AQ9UFP1 575 aa17.45■□□□□ 0.38
COL9A2-208ENST00000488463 MAST2Q6P0Q8 1798 aa17.45■□□□□ 0.38
COL9A2-208ENST00000488463 HSPA8P11142 646 aaKnown RBP17.44■□□□□ 0.38
COL9A2-208ENST00000488463 TNNI2P48788 182 aa17.44■□□□□ 0.38
COL9A2-208ENST00000488463 TTLL12Q14166 644 aaPredicted RBP17.44■□□□□ 0.38
COL9A2-208ENST00000488463 CCDC158Q5M9N0 1113 aa17.44■□□□□ 0.38
COL9A2-208ENST00000488463 TTC39AQ5SRH9 613 aa17.44■□□□□ 0.38
COL9A2-208ENST00000488463 CLMNQ96JQ2 1002 aa17.44■□□□□ 0.38
COL9A2-208ENST00000488463 IL1RAPL2Q9NP60 686 aa17.44■□□□□ 0.38
COL9A2-208ENST00000488463 MROH7-TTC4A0A0A0MT08 1334 aa17.44■□□□□ 0.38
COL9A2-208ENST00000488463 DOCK2Q92608 1830 aa17.43■□□□□ 0.38
COL9A2-208ENST00000488463 PPP1R12BO60237 982 aaPredicted RBP17.43■□□□□ 0.38
COL9A2-208ENST00000488463 RHBDL3P58872 404 aa17.43■□□□□ 0.38
COL9A2-208ENST00000488463 ERICH6Q7L0X2 663 aa17.43■□□□□ 0.38
COL9A2-208ENST00000488463 AACSQ86V21 672 aa17.43■□□□□ 0.38
COL9A2-208ENST00000488463 DZIP1Q86YF9 867 aaKnown RBP17.43■□□□□ 0.38
COL9A2-208ENST00000488463 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
COL9A2-208ENST00000488463 CSRNP1Q96S65 589 aa17.43■□□□□ 0.38
COL9A2-208ENST00000488463 GPR75-ASB3A0A0A6YYF3 556 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 UNCXA6NJT0 531 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 RAB11FIP3O75154 756 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 ZAP70P43403 619 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 ZFPM1Q8IX07 1006 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 FAM151AQ8WW52 585 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 AIDAQ96BJ3 306 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 IDI2Q9BXS1 227 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 USP40Q9NVE5 1235 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 TMOD2Q9NZR1 351 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 PCDHB15Q9Y5E8 787 aa17.42■□□□□ 0.38
COL9A2-208ENST00000488463 ATRNL1Q5VV63 1379 aa17.41■□□□□ 0.38
COL9A2-208ENST00000488463 WDHD1O75717 1129 aaPredicted RBP17.41■□□□□ 0.38
COL9A2-208ENST00000488463 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.41■□□□□ 0.38
COL9A2-208ENST00000488463 PIH1D3Q9NQM4 214 aaKnown RBP17.41■□□□□ 0.38
COL9A2-208ENST00000488463 CDK5RAP2Q96SN8 1893 aa17.4■□□□□ 0.38
COL9A2-208ENST00000488463 APBB1O00213 710 aa17.4■□□□□ 0.38
COL9A2-208ENST00000488463 BTDP43251 543 aa17.4■□□□□ 0.38
COL9A2-208ENST00000488463 SPRYD7Q5W111 196 aa17.4■□□□□ 0.38
COL9A2-208ENST00000488463 SH3BP5LQ7L8J4 393 aa17.4■□□□□ 0.38
COL9A2-208ENST00000488463 SLF2Q8IX21 1173 aa17.4■□□□□ 0.38
COL9A2-208ENST00000488463 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.4■□□□□ 0.383e-6■■■■□ 21.3
COL9A2-208ENST00000488463 DDX4Q9NQI0 724 aaKnown RBP17.4■□□□□ 0.38
COL9A2-208ENST00000488463 NDUFB9Q9Y6M9 179 aa17.4■□□□□ 0.38
COL9A2-208ENST00000488463 GJA5P36382 358 aa17.39■□□□□ 0.37
COL9A2-208ENST00000488463 IREB2P48200 963 aaKnown RBP17.39■□□□□ 0.37
COL9A2-208ENST00000488463 TCP10Q12799 353 aa17.39■□□□□ 0.37
COL9A2-208ENST00000488463 ADGRA1Q86SQ6 560 aa17.39■□□□□ 0.37
COL9A2-208ENST00000488463 DCTPP1Q9H773 170 aa17.39■□□□□ 0.37
COL9A2-208ENST00000488463 RAI14Q9P0K7 980 aa17.39■□□□□ 0.37
COL9A2-208ENST00000488463 LRP2BPQ9P2M1 347 aa17.39■□□□□ 0.37
COL9A2-208ENST00000488463 TSKSQ9UJT2 592 aa17.39■□□□□ 0.37
COL9A2-208ENST00000488463 AK9Q5TCS8 1911 aa17.39■□□□□ 0.37
COL9A2-208ENST00000488463 CA12O43570 354 aa17.38■□□□□ 0.37
COL9A2-208ENST00000488463 ENTPD3O75355 529 aa17.38■□□□□ 0.37
COL9A2-208ENST00000488463 TM4SF4P48230 202 aa17.38■□□□□ 0.37
COL9A2-208ENST00000488463 RGS3P49796 1198 aa17.38■□□□□ 0.37
COL9A2-208ENST00000488463 ANKRD13AQ8IZ07 590 aa17.38■□□□□ 0.37
COL9A2-208ENST00000488463 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
COL9A2-208ENST00000488463 SLC10A4Q96EP9 437 aa17.38■□□□□ 0.37
COL9A2-208ENST00000488463 WNK4Q96J92 1243 aa17.38■□□□□ 0.37
COL9A2-208ENST00000488463 CRBNQ96SW2 442 aa17.38■□□□□ 0.37
COL9A2-208ENST00000488463 ANTXR1Q9H6X2 564 aa17.38■□□□□ 0.37
COL9A2-208ENST00000488463 FOCADQ5VW36 1801 aa17.37■□□□□ 0.37
COL9A2-208ENST00000488463 CASP8AP2Q9UKL3 1982 aa17.37■□□□□ 0.37
COL9A2-208ENST00000488463 IGSF3O75054 1194 aa17.37■□□□□ 0.37
COL9A2-208ENST00000488463 NPM3O75607 178 aaKnown RBP17.37■□□□□ 0.37
COL9A2-208ENST00000488463 LDHCP07864 332 aa17.37■□□□□ 0.37
COL9A2-208ENST00000488463 GSTO1P78417 241 aa17.37■□□□□ 0.37
COL9A2-208ENST00000488463 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
COL9A2-208ENST00000488463 VGLL4Q14135 290 aa17.37■□□□□ 0.37
COL9A2-208ENST00000488463 REM2Q8IYK8 340 aaPredicted RBP17.37■□□□□ 0.37
COL9A2-208ENST00000488463 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.37■□□□□ 0.37
COL9A2-208ENST00000488463 RNF186Q9NXI6 227 aa17.37■□□□□ 0.37
COL9A2-208ENST00000488463 SAGE1Q9NXZ1 904 aa17.37■□□□□ 0.37
COL9A2-208ENST00000488463 ZNF112Q9UJU3 913 aa17.37■□□□□ 0.37
COL9A2-208ENST00000488463 ZBTB48P10074 688 aaPredicted RBP17.36■□□□□ 0.37
COL9A2-208ENST00000488463 PPP4CP60510 307 aa17.36■□□□□ 0.37
COL9A2-208ENST00000488463 MAP3K9P80192 1104 aa17.36■□□□□ 0.37
COL9A2-208ENST00000488463 MAP3K10Q02779 954 aa17.36■□□□□ 0.37
COL9A2-208ENST00000488463 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
COL9A2-208ENST00000488463 BEGAINQ9BUH8 593 aa17.36■□□□□ 0.37
COL9A2-208ENST00000488463 DDTLA6NHG4 134 aaPredicted RBP17.35■□□□□ 0.37
COL9A2-208ENST00000488463 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
COL9A2-208ENST00000488463 MAP4K4O95819 1239 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms