RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 KLRG1Q96E93 195 aa9.93□□□□□ -0.82
NECTIN3-209ENST00000488016 CCDC85AQ96PX6 553 aaPredicted RBP9.93□□□□□ -0.82
NECTIN3-209ENST00000488016 SH3TC1Q8TE82 1336 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 NEURL1BA8MQ27 555 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 NFKBIEO00221 500 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 TOMM70O94826 608 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 DDX58O95786 925 aaKnown RBP9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 NR3C2P08235 984 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 GRM5P41594 1212 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 TPRNQ4KMQ1 711 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 ZBTB33Q86T24 672 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 DNAAF4Q8WXU2 420 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 SLC10A4Q96EP9 437 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 MASTLQ96GX5 879 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 TNNQ9UQP3 1299 aa9.92□□□□□ -0.82
NECTIN3-209ENST00000488016 ABCC4O15439 1325 aa9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 IRS4O14654 1257 aaPredicted RBP9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 WFS1O76024 890 aa9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 NPR1P16066 1061 aa9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 BRPF1P55201 1214 aaPredicted RBP9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 CRY2Q49AN0 593 aa9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 STYK1Q6J9G0 422 aa9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 SLC4A10Q6U841 1118 aa9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 KLF16Q9BXK1 252 aaPredicted RBP9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 SMC4Q9NTJ3 1288 aa9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 CWC25Q9NXE8 425 aaPredicted RBP9.91□□□□□ -0.82
NECTIN3-209ENST00000488016 RIC1Q4ADV7 1423 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 WDR90Q96KV7 1748 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 ZBED9Q6R2W3 1325 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 PTK2Q05397 1052 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 TMEM259Q4ZIN3 620 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 SLC10A5Q5PT55 438 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 RPGRQ92834 1020 aaKnown RBP9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 ITPKCQ96DU7 683 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 ZFP42Q96MM3 310 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 YTHDC1Q96MU7 727 aaKnown RBP9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 NLRP3Q96P20 1036 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 ZFAND3Q9H8U3 227 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 NMRK2Q9NPI5 230 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 SEC31BQ9NQW1 1179 aa9.9□□□□□ -0.82
NECTIN3-209ENST00000488016 CACNA1FO60840 1977 aa9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 BCAR3O75815 825 aa9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 TRIM28Q13263 835 aaKnown RBP9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 BEND3Q5T5X7 828 aa9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 C9orf131Q5VYM1 1079 aa9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 UBE3BQ7Z3V4 1068 aa9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 ZBTB38Q8NAP3 1195 aaPredicted RBP9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 CCDC191Q8NCU4 936 aa9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 C7orf43Q8WVR3 580 aa9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 CELF1Q92879 486 aaKnown RBP9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 CNKSR1Q969H4 720 aa9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 PURBQ96QR8 312 aaKnown RBP9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 CDV3Q9UKY7 258 aaKnown RBP9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 GPSM3Q9Y4H4 160 aa9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 FER1L6Q2WGJ9 1857 aa9.89□□□□□ -0.83
NECTIN3-209ENST00000488016 SBF1O95248 1867 aa9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 CCDC88AQ3V6T2 1871 aa9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 UPP2O95045 317 aa9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 PCCAP05165 728 aaPredicted RBP9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 RARSP54136 660 aaKnown RBP9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 CASP7P55210 303 aa9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 NEXNQ0ZGT2 675 aa9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 GCKRQ14397 625 aa9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 CCDC116Q8IYX3 515 aa9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 RBM17Q96I25 401 aaKnown RBP9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 HMX1Q9NP08 348 aaPredicted RBP9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 RNF181Q9P0P0 153 aa9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 NOB1Q9ULX3 412 aaKnown RBP9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 SNED1Q8TER0 1413 aa9.88□□□□□ -0.83
NECTIN3-209ENST00000488016 COL4A5P29400 1685 aa9.87□□□□□ -0.83
NECTIN3-209ENST00000488016 TERTO14746 1132 aaKnown RBP9.87□□□□□ -0.83
NECTIN3-209ENST00000488016 HOXA10P31260 410 aaPredicted RBP9.87□□□□□ -0.83
NECTIN3-209ENST00000488016 EPHA10Q5JZY3 1008 aa9.87□□□□□ -0.83
NECTIN3-209ENST00000488016 EPS8L1Q8TE68 723 aa9.87□□□□□ -0.83
NECTIN3-209ENST00000488016 GPR101Q96P66 508 aaPredicted RBP9.87□□□□□ -0.83
NECTIN3-209ENST00000488016 CHMP4AQ9BY43 222 aa9.87□□□□□ -0.83
NECTIN3-209ENST00000488016 ZNF277Q9NRM2 450 aaPredicted RBP9.87□□□□□ -0.83
NECTIN3-209ENST00000488016 SPEF2Q9C093 1822 aa9.86□□□□□ -0.83
NECTIN3-209ENST00000488016 RNF123Q5XPI4 1314 aa9.86□□□□□ -0.83
NECTIN3-209ENST00000488016 H7C1W4 665 aa9.86□□□□□ -0.83
NECTIN3-209ENST00000488016 NFX1Q12986 1120 aaKnown RBP9.86□□□□□ -0.83
NECTIN3-209ENST00000488016 SF3B3Q15393 1217 aaKnown RBP9.86□□□□□ -0.83
NECTIN3-209ENST00000488016 ALDH1L2Q3SY69 923 aa9.86□□□□□ -0.83
NECTIN3-209ENST00000488016 TIAM2Q8IVF5 1701 aa9.86□□□□□ -0.83
NECTIN3-209ENST00000488016 LINS1Q8NG48 757 aa9.86□□□□□ -0.83
NECTIN3-209ENST00000488016 GREM2Q9H772 168 aa9.86□□□□□ -0.83
NECTIN3-209ENST00000488016 CDHR2Q9BYE9 1310 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 DUOX1Q9NRD9 1551 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 WTIPA6NIX2 430 aaPredicted RBP9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 PDE8AO60658 829 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 NBPF7P0C2Y1 421 aaPredicted RBP9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 HSPA1AP0DMV8 641 aaKnown RBP9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 HSPA1BP0DMV9 641 aaKnown RBP9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 ALDH1B1P30837 517 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 CTSWP56202 376 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 GRAPQ13588 217 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 CCDC93Q567U6 631 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 C6orf118Q5T5N4 469 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 DDX46Q7L014 1031 aaKnown RBP9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 GRAPLQ8TC17 118 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms