RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CABS1Q96KC9 395 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 SAR1BQ9Y6B6 198 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 SSBP05455 408 aaKnown RBP eCLIP17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 AMOTQ4VCS5 1084 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ARMCX5Q6P1M9 558 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 RPAINQ86UA6 219 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 KRT9P35527 623 aa17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 POSTNQ15063 836 aa17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 TRIM47Q96LD4 638 aa17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 RBM28Q9NW13 759 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CCT6AP40227 531 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 TDRD12Q587J7 1177 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CEP85LQ5SZL2 805 aa17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 TRMT44Q8IYL2 757 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 RGS22Q8NE09 1264 aa17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 NSUN7Q8NE18 718 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 EYA1Q99502 592 aa17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 SLF1Q9BQI6 1058 aa17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 GEMIN8Q9NWZ8 242 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CDC42BPAQ5VT25 1732 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 GUCY2CP25092 1073 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 FAM114A1Q8IWE2 563 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 DYDC1Q8WWB3 177 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 CDK5RAP3Q96JB5 506 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 BPIFA3Q9BQP9 254 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 NAPBQ9H115 298 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 FLT4P35916 1363 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 GOLGA8KD6RF30 607 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 ATP1A3P13637 1013 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 CCDC42Q96M95 316 aa17.27■□□□□ 0.35
HLA-DQB1-209ENST00000487676 HOXB7P09629 217 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 CCDC178Q5BJE1 867 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 GIGYF2Q6Y7W6 1299 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 CPLX4Q7Z7G2 160 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 PLEKHA4Q9H4M7 779 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 VEZTQ9HBM0 779 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 SNRKQ9NRH2 765 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 POLR2DO15514 142 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 RNF113AO15541 343 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 TAF5LO75529 589 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 LRCH2Q5VUJ6 765 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 SLC35F6Q8N357 371 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 LINC00301Q8NCQ3 95 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 POLR3EQ9NVU0 708 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 ASXL2Q76L83 1435 aa17.26■□□□□ 0.35
HLA-DQB1-209ENST00000487676 ANKS4BQ8N8V4 417 aa17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 MYO1AQ9UBC5 1043 aa17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 CLIC4Q9Y696 253 aa17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 SYNRGQ9UMZ2 1314 aa17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 NLRP2Q9NX02 1062 aa17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 TRIM75PA6NK02 468 aa17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 NEDD9Q14511 834 aa17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 TEX2Q8IWB9 1127 aa17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 VPS16Q9H269 839 aa17.25■□□□□ 0.35
HLA-DQB1-209ENST00000487676 NEBLO76041 1014 aa17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 TFCP2Q12800 502 aa17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 RILPL1Q5EBL4 403 aa17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 MRFAP1Q9Y605 127 aa17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 ARHGEF10O15013 1369 aa17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 FBXO31Q5XUX0 539 aaPredicted RBP17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 KBTBD3Q8NAB2 608 aa17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 IFT81Q8WYA0 676 aa17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 TSGA10Q9BZW7 698 aa17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 PCDHA5Q9Y5H7 936 aa17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 AATKQ6ZMQ8 1374 aa17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 FGFR1OPO95684 399 aaKnown RBP17.24■□□□□ 0.35
HLA-DQB1-209ENST00000487676 JAKMIP2Q96AA8 810 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 PNPLA6Q8IY17 1366 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 MAP3K4Q9Y6R4 1608 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 GOLPH3LQ9H4A5 285 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 ATP5JP18859 108 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 C8orf74Q6P047 294 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 TRIML1Q8N9V2 468 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 CCDC113Q9H0I3 377 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 C19orf44Q9H6X5 657 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 MAP3K19Q56UN5 1328 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 ABCA8O94911 1581 aa17.23■□□□□ 0.35
HLA-DQB1-209ENST00000487676 MACROD2A1Z1Q3 448 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 E7EWF7 191 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 PSMA7O14818 248 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 POLA2Q14181 598 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 LONRF3Q496Y0 759 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 KRT40Q6A162 431 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 JPH2Q9BR39 696 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 HAUS4Q9H6D7 363 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 TBC1D8O95759 1140 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 TNNI3KQ59H18 835 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 SMARCC2Q8TAQ2 1214 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 FPGT-TNNI3KV9GXZ4 949 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 ADCY9O60503 1353 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 TOB2Q14106 344 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 VPS37DQ86XT2 251 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 SLC39A14Q15043 492 aa17.22■□□□□ 0.35
HLA-DQB1-209ENST00000487676 RBM43Q6ZSC3 357 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms