RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 PLCB3Q01970 1234 aa7.15□□□□□ -1.26
RBM39-234ENST00000487604 PDE3AQ14432 1141 aa7.15□□□□□ -1.26
RBM39-234ENST00000487604 CPSF6Q16630 551 aaKnown RBP eCLIP7.15□□□□□ -1.26
RBM39-234ENST00000487604 WDR89Q96FK6 387 aaPredicted RBP7.15□□□□□ -1.26
RBM39-234ENST00000487604 CCDC86Q9H6F5 360 aaKnown RBP7.15□□□□□ -1.26
RBM39-234ENST00000487604 NLRP2Q9NX02 1062 aa7.15□□□□□ -1.26
RBM39-234ENST00000487604 SYNGAP1Q96PV0 1343 aa7.15□□□□□ -1.26
RBM39-234ENST00000487604 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.14□□□□□ -1.27
RBM39-234ENST00000487604 DYNC1LI2O43237 492 aaPredicted RBP7.14□□□□□ -1.27
RBM39-234ENST00000487604 TREHO43280 583 aa7.14□□□□□ -1.27
RBM39-234ENST00000487604 LIG1P18858 919 aa7.14□□□□□ -1.27
RBM39-234ENST00000487604 MAP7Q14244 749 aa7.14□□□□□ -1.27
RBM39-234ENST00000487604 MSMPQ1L6U9 139 aa7.14□□□□□ -1.27
RBM39-234ENST00000487604 METTL22Q9BUU2 404 aaPredicted RBP7.14□□□□□ -1.27
RBM39-234ENST00000487604 BCO2Q9BYV7 579 aa7.14□□□□□ -1.27
RBM39-234ENST00000487604 ZC3H12CQ9C0D7 883 aaKnown RBP7.14□□□□□ -1.27
RBM39-234ENST00000487604 PPP4R2Q9NY27 417 aa7.14□□□□□ -1.27
RBM39-234ENST00000487604 ZNF862O60290 1169 aa7.13□□□□□ -1.27
RBM39-234ENST00000487604 ENOX2Q16206 610 aaKnown RBP7.13□□□□□ -1.27
RBM39-234ENST00000487604 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.13□□□□□ -1.27
RBM39-234ENST00000487604 SEZ6L2Q6UXD5 910 aa7.13□□□□□ -1.27
RBM39-234ENST00000487604 DTHD1Q6ZMT9 781 aa7.13□□□□□ -1.27
RBM39-234ENST00000487604 C1GALT1Q9NS00 363 aa7.13□□□□□ -1.27
RBM39-234ENST00000487604 TMEM39AQ9NV64 488 aa7.13□□□□□ -1.27
RBM39-234ENST00000487604 PNMA6FA0A0J9YX94 578 aa7.12□□□□□ -1.27
RBM39-234ENST00000487604 CYP26A1O43174 497 aa7.12□□□□□ -1.27
RBM39-234ENST00000487604 MAPK1P28482 360 aa7.12□□□□□ -1.27
RBM39-234ENST00000487604 IRAK1P51617 712 aa7.12□□□□□ -1.27
RBM39-234ENST00000487604 NXPE4Q6UWF7 544 aa7.12□□□□□ -1.27
RBM39-234ENST00000487604 CRIM1Q9NZV1 1036 aa7.12□□□□□ -1.27
RBM39-234ENST00000487604 TMPRSS2O15393 492 aa7.11□□□□□ -1.27
RBM39-234ENST00000487604 GSTP1P09211 210 aaKnown RBP7.11□□□□□ -1.27
RBM39-234ENST00000487604 XRCC5P13010 732 aaKnown RBP7.11□□□□□ -1.27
RBM39-234ENST00000487604 PPP2R3AQ06190 1150 aa7.11□□□□□ -1.27
RBM39-234ENST00000487604 DUSP27Q5VZP5 1158 aa7.11□□□□□ -1.27
RBM39-234ENST00000487604 ZNF765Q7L2R6 523 aa7.11□□□□□ -1.27
RBM39-234ENST00000487604 PDZD3Q86UT5 571 aa7.11□□□□□ -1.27
RBM39-234ENST00000487604 STK35Q8TDR2 534 aa7.11□□□□□ -1.27
RBM39-234ENST00000487604 LGR6Q9HBX8 967 aa7.11□□□□□ -1.27
RBM39-234ENST00000487604 DAGLAQ9Y4D2 1042 aa7.11□□□□□ -1.27
RBM39-234ENST00000487604 PRNPP04156 253 aa7.1□□□□□ -1.27
RBM39-234ENST00000487604 SLFN14P0C7P3 912 aa7.1□□□□□ -1.27
RBM39-234ENST00000487604 KIF4BQ2VIQ3 1234 aa7.1□□□□□ -1.27
RBM39-234ENST00000487604 NFXL1Q6ZNB6 911 aa7.1□□□□□ -1.27
RBM39-234ENST00000487604 DISC1Q9NRI5 854 aa7.1□□□□□ -1.27
RBM39-234ENST00000487604 KRT82Q9NSB4 513 aa7.1□□□□□ -1.27
RBM39-234ENST00000487604 AKAP2Q9Y2D5 859 aa7.1□□□□□ -1.27
RBM39-234ENST00000487604 PCDHGC5Q9Y5F6 944 aa7.1□□□□□ -1.27
RBM39-234ENST00000487604 TAL1P17542 331 aaPredicted RBP7.09□□□□□ -1.27
RBM39-234ENST00000487604 CYP27A1Q02318 531 aa7.09□□□□□ -1.27
RBM39-234ENST00000487604 ID3Q02535 119 aa7.09□□□□□ -1.27
RBM39-234ENST00000487604 OGFOD3Q6PK18 319 aa7.09□□□□□ -1.27
RBM39-234ENST00000487604 FANCD2OSQ96PS1 177 aa7.09□□□□□ -1.27
RBM39-234ENST00000487604 KRTAP4-12Q9BQ66 201 aa7.09□□□□□ -1.27
RBM39-234ENST00000487604 LRRC4CQ9HCJ2 640 aa7.09□□□□□ -1.27
RBM39-234ENST00000487604 CCDC39Q9UFE4 941 aa7.09□□□□□ -1.27
RBM39-234ENST00000487604 GPN3Q9UHW5 284 aaPredicted RBP7.09□□□□□ -1.27
RBM39-234ENST00000487604 ARNTP27540 789 aa7.08□□□□□ -1.28
RBM39-234ENST00000487604 SULF2Q8IWU5 870 aa7.08□□□□□ -1.28
RBM39-234ENST00000487604 ABI1Q8IZP0 508 aa7.08□□□□□ -1.28
RBM39-234ENST00000487604 C3orf58Q8NDZ4 430 aa7.08□□□□□ -1.28
RBM39-234ENST00000487604 KCNB2Q92953 911 aa7.08□□□□□ -1.28
RBM39-234ENST00000487604 ATXN3LQ9H3M9 355 aa7.08□□□□□ -1.28
RBM39-234ENST00000487604 BSDC1Q9NW68 430 aaPredicted RBP7.08□□□□□ -1.28
RBM39-234ENST00000487604 ZC3H7BQ9UGR2 993 aaKnown RBP7.08□□□□□ -1.28
RBM39-234ENST00000487604 ADGRE2Q9UHX3 823 aa7.08□□□□□ -1.28
RBM39-234ENST00000487604 ANGEL1Q9UNK9 670 aaKnown RBP7.08□□□□□ -1.28
RBM39-234ENST00000487604 IVNS1ABPQ9Y6Y0 642 aa7.08□□□□□ -1.28
RBM39-234ENST00000487604 SETDB2Q96T68 719 aa7.07□□□□□ -1.28
RBM39-234ENST00000487604 FMR1Q06787 632 aaKnown RBP eCLIP7.06□□□□□ -1.28
RBM39-234ENST00000487604 SMYD4Q8IYR2 804 aaPredicted RBP7.06□□□□□ -1.28
RBM39-234ENST00000487604 OSBPL7Q9BZF2 842 aa7.06□□□□□ -1.28
RBM39-234ENST00000487604 PIDD1Q9HB75 910 aa7.06□□□□□ -1.28
RBM39-234ENST00000487604 PAX4O43316 350 aa7.05□□□□□ -1.28
RBM39-234ENST00000487604 NME2P22392 152 aa7.05□□□□□ -1.28
RBM39-234ENST00000487604 MAPK8P45983 427 aa7.05□□□□□ -1.28
RBM39-234ENST00000487604 KCNA1Q09470 495 aa7.05□□□□□ -1.28
RBM39-234ENST00000487604 ZNF252P-AS1Q0IIN9 211 aa7.05□□□□□ -1.28
RBM39-234ENST00000487604 CDK5R2Q13319 367 aa7.05□□□□□ -1.28
RBM39-234ENST00000487604 TTLL4Q14679 1199 aa7.05□□□□□ -1.28
RBM39-234ENST00000487604 ZC3H12AQ5D1E8 599 aaKnown RBP7.05□□□□□ -1.28
RBM39-234ENST00000487604 VSIG10LQ86VR7 867 aa7.05□□□□□ -1.28
RBM39-234ENST00000487604 ZSCAN29Q8IWY8 852 aaPredicted RBP7.05□□□□□ -1.28
RBM39-234ENST00000487604 FBF1Q8TES7 1133 aa7.05□□□□□ -1.28
RBM39-234ENST00000487604 NECAB3Q96P71 396 aaPredicted RBP7.05□□□□□ -1.28
RBM39-234ENST00000487604 WWC3Q9ULE0 1092 aa7.05□□□□□ -1.28
RBM39-234ENST00000487604 NEFMP07197 916 aa7.04□□□□□ -1.28
RBM39-234ENST00000487604 HCLS1P14317 486 aaPredicted RBP7.04□□□□□ -1.28
RBM39-234ENST00000487604 COL19A1Q14993 1142 aa7.04□□□□□ -1.28
RBM39-234ENST00000487604 MAP1SQ66K74 1059 aaPredicted RBP7.04□□□□□ -1.28
RBM39-234ENST00000487604 MPRIPQ6WCQ1 1025 aa7.04□□□□□ -1.28
RBM39-234ENST00000487604 FBXL18Q96ME1 805 aa7.04□□□□□ -1.28
RBM39-234ENST00000487604 ASB16Q96NS5 453 aa7.04□□□□□ -1.28
RBM39-234ENST00000487604 FMNL2Q96PY5 1086 aa7.04□□□□□ -1.28
RBM39-234ENST00000487604 CACNA2D2Q9NY47 1150 aa7.04□□□□□ -1.28
RBM39-234ENST00000487604 RNGTTO60942 597 aaKnown RBP7.03□□□□□ -1.28
RBM39-234ENST00000487604 PAGE1O75459 146 aa7.03□□□□□ -1.28
RBM39-234ENST00000487604 FAM87AP0C7U9 286 aa7.03□□□□□ -1.28
RBM39-234ENST00000487604 BMP6P22004 513 aa7.03□□□□□ -1.28
RBM39-234ENST00000487604 GSTT1P30711 240 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms