RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 FAM43AQ8N2R8 423 aa15.17■□□□□ 0.02
VPS16-208ENST00000487461 HOOK2Q96ED9 719 aa15.17■□□□□ 0.02
VPS16-208ENST00000487461 ERO1AQ96HE7 468 aa15.17■□□□□ 0.02
VPS16-208ENST00000487461 WRNIP1Q96S55 665 aa15.17■□□□□ 0.02
VPS16-208ENST00000487461 DENND2AQ9ULE3 1009 aa15.17■□□□□ 0.02
VPS16-208ENST00000487461 SALL1Q9NSC2 1324 aa15.17■□□□□ 0.02
VPS16-208ENST00000487461 OTOFQ9HC10 1997 aa15.16■□□□□ 0.02
VPS16-208ENST00000487461 SEMA3EO15041 775 aa15.16■□□□□ 0.02
VPS16-208ENST00000487461 NFIAQ12857 509 aa15.16■□□□□ 0.02
VPS16-208ENST00000487461 CCDC102BQ68D86 513 aa15.16■□□□□ 0.02
VPS16-208ENST00000487461 ERO1BQ86YB8 467 aa15.16■□□□□ 0.02
VPS16-208ENST00000487461 USP40Q9NVE5 1235 aa15.16■□□□□ 0.02
VPS16-208ENST00000487461 TNNQ9UQP3 1299 aa15.16■□□□□ 0.02
VPS16-208ENST00000487461 PTPN22Q9Y2R2 807 aa15.16■□□□□ 0.02
VPS16-208ENST00000487461 IRF6O14896 467 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 ZBTB22O15209 634 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 BCAR3O75815 825 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 GNAI3P08754 354 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 INPP5BP32019 993 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 TFCP2Q12800 502 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 TAF1CQ15572 869 aaPredicted RBP15.15■□□□□ 0.02
VPS16-208ENST00000487461 DCAF15Q66K64 600 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 ZFPM1Q8IX07 1006 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 ZNF341Q9BYN7 854 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 EFCC1Q9HA90 598 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 ZFYVE28Q9HCC9 887 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 FAM198AQ9UFP1 575 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 ZNF112Q9UJU3 913 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 LAMB1P07942 1786 aa15.15■□□□□ 0.02
VPS16-208ENST00000487461 RPAP1Q9BWH6 1393 aaPredicted RBP15.14■□□□□ 0.01
VPS16-208ENST00000487461 PDE4DIPQ5VU43 2346 aa15.14■□□□□ 0.01
VPS16-208ENST00000487461 IPO8O15397 1037 aaKnown RBP15.14■□□□□ 0.01
VPS16-208ENST00000487461 CETPP11597 493 aa15.14■□□□□ 0.01
VPS16-208ENST00000487461 TRIM27P14373 513 aa15.14■□□□□ 0.01
VPS16-208ENST00000487461 PPIL2Q13356 520 aa15.14■□□□□ 0.01
VPS16-208ENST00000487461 MTX1Q13505 466 aa15.14■□□□□ 0.01
VPS16-208ENST00000487461 XAGE2Q96GT9 111 aa15.14■□□□□ 0.01
VPS16-208ENST00000487461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.14■□□□□ 0.01
VPS16-208ENST00000487461 A0A1B0GUL7 405 aa15.13■□□□□ 0.01
VPS16-208ENST00000487461 BTBD19C9JJ37 291 aa15.13■□□□□ 0.01
VPS16-208ENST00000487461 SNAPC2Q13487 334 aa15.13■□□□□ 0.01
VPS16-208ENST00000487461 RASGRF1Q13972 1273 aa15.13■□□□□ 0.01
VPS16-208ENST00000487461 ATF7IPQ6VMQ6 1270 aa15.13■□□□□ 0.01
VPS16-208ENST00000487461 FRAT1Q92837 279 aaPredicted RBP15.13■□□□□ 0.01
VPS16-208ENST00000487461 AKAP2Q9Y2D5 859 aa15.13■□□□□ 0.01
VPS16-208ENST00000487461 TNRC18O15417 2968 aaPredicted RBP15.13■□□□□ 0.01
VPS16-208ENST00000487461 PPATQ06203 517 aa15.12■□□□□ 0.01
VPS16-208ENST00000487461 ZGPATQ8N5A5 531 aaKnown RBP15.12■□□□□ 0.01
VPS16-208ENST00000487461 ABCF2Q9UG63 623 aa15.12■□□□□ 0.01
VPS16-208ENST00000487461 TLR2O60603 784 aa15.11■□□□□ 0.01
VPS16-208ENST00000487461 GNAI2P04899 355 aa15.11■□□□□ 0.01
VPS16-208ENST00000487461 CLUAP1Q96AJ1 413 aa15.11■□□□□ 0.01
VPS16-208ENST00000487461 NEUROD6Q96NK8 337 aa15.11■□□□□ 0.01
VPS16-208ENST00000487461 IDI2Q9BXS1 227 aa15.11■□□□□ 0.01
VPS16-208ENST00000487461 GAKO14976 1311 aa15.11■□□□□ 0.01
VPS16-208ENST00000487461 PNMA6EA0A0J9YXQ4 647 aa15.1■□□□□ 0.01
VPS16-208ENST00000487461 POTEFA5A3E0 1075 aa15.1■□□□□ 0.01
VPS16-208ENST00000487461 RGS3P49796 1198 aa15.1■□□□□ 0.01
VPS16-208ENST00000487461 MVPQ14764 893 aaKnown RBP15.1■□□□□ 0.01
VPS16-208ENST00000487461 SH3BP5LQ7L8J4 393 aa15.1■□□□□ 0.01
VPS16-208ENST00000487461 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.1■□□□□ 0.01
VPS16-208ENST00000487461 ARMC5Q96C12 935 aa15.1■□□□□ 0.01
VPS16-208ENST00000487461 FAM163AQ96GL9 167 aaPredicted RBP15.1■□□□□ 0.01
VPS16-208ENST00000487461 ZCCHC17Q9NP64 241 aaKnown RBP15.1■□□□□ 0.01
VPS16-208ENST00000487461 PDS5AQ29RF7 1337 aaKnown RBP15.1■□□□□ 0.01
VPS16-208ENST00000487461 PHF20L1A8MW92 1017 aa15.09■□□□□ 0.01
VPS16-208ENST00000487461 ENTPD3O75355 529 aa15.09■□□□□ 0.01
VPS16-208ENST00000487461 WDHD1O75717 1129 aaPredicted RBP15.09■□□□□ 0.01
VPS16-208ENST00000487461 MOGSQ13724 837 aa15.09■□□□□ 0.01
VPS16-208ENST00000487461 NOL9Q5SY16 702 aaKnown RBP15.09■□□□□ 0.01
VPS16-208ENST00000487461 SPTY2D1Q68D10 685 aaPredicted RBP15.09■□□□□ 0.01
VPS16-208ENST00000487461 DZIP1Q86YF9 867 aaKnown RBP15.09■□□□□ 0.01
VPS16-208ENST00000487461 ZNF384Q8TF68 577 aa15.09■□□□□ 0.01
VPS16-208ENST00000487461 ARHGAP39Q9C0H5 1083 aa15.09■□□□□ 0.01
VPS16-208ENST00000487461 HMG20BQ9P0W2 317 aa15.09■□□□□ 0.01
VPS16-208ENST00000487461 KCNH4Q9UQ05 1017 aa15.09■□□□□ 0.01
VPS16-208ENST00000487461 MYH13Q9UKX3 1938 aa15.09■□□□□ 0.01
VPS16-208ENST00000487461 SLURP2P0DP57 97 aa15.08■□□□□ 0
VPS16-208ENST00000487461 BTDP43251 543 aa15.08■□□□□ 0
VPS16-208ENST00000487461 MAP3K10Q02779 954 aa15.08■□□□□ 0
VPS16-208ENST00000487461 MECOMQ03112 1051 aa15.08■□□□□ 0
VPS16-208ENST00000487461 G3BP1Q13283 466 aaKnown RBP eCLIP15.08■□□□□ 0
VPS16-208ENST00000487461 ARHGEF6Q15052 776 aa15.08■□□□□ 0
VPS16-208ENST00000487461 C17orf99Q6UX52 265 aa15.08■□□□□ 0
VPS16-208ENST00000487461 ERICH6Q7L0X2 663 aa15.08■□□□□ 0
VPS16-208ENST00000487461 ANKRD23Q86SG2 305 aa15.08■□□□□ 0
VPS16-208ENST00000487461 SLF2Q8IX21 1173 aa15.08■□□□□ 0
VPS16-208ENST00000487461 TMEM57Q8N5G2 664 aa15.08■□□□□ 0
VPS16-208ENST00000487461 DDX4Q9NQI0 724 aaKnown RBP15.08■□□□□ 0
VPS16-208ENST00000487461 PTCH2Q9Y6C5 1203 aa15.08■□□□□ 0
VPS16-208ENST00000487461 ATRNL1Q5VV63 1379 aa15.08■□□□□ 0
VPS16-208ENST00000487461 GPR75-ASB3A0A0A6YYF3 556 aa15.07■□□□□ 0
VPS16-208ENST00000487461 DDTLA6NHG4 134 aaPredicted RBP15.07■□□□□ 0
VPS16-208ENST00000487461 PDHXO00330 501 aa15.07■□□□□ 0
VPS16-208ENST00000487461 LACTBP83111 547 aaPredicted RBP15.07■□□□□ 0
VPS16-208ENST00000487461 GORABQ5T7V8 394 aa15.07■□□□□ 0
VPS16-208ENST00000487461 PRPF38BQ5VTL8 546 aaKnown RBP15.07■□□□□ 0
VPS16-208ENST00000487461 ZKSCAN2Q63HK3 967 aa15.07■□□□□ 0
VPS16-208ENST00000487461 PI16Q6UXB8 463 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms