RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 RPS6KB1P23443 525 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 USP5P45974 858 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 FKBP1AP62942 108 aaKnown RBP9.53□□□□□ -0.88
ZNF541-204ENST00000487275 TRDNQ13061 729 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 STRIP1Q5VSL9 837 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 GIMAP6Q6P9H5 292 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 STOX1Q6ZVD7 989 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 USP17L1Q7RTZ2 530 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 RALYLQ86SE5 291 aaKnown RBP9.53□□□□□ -0.88
ZNF541-204ENST00000487275 SPRYD3Q8NCJ5 442 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 SDR42E1Q8WUS8 393 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 TTC14Q96N46 770 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 TAOK3Q9H2K8 898 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 TTF2Q9UNY4 1162 aaKnown RBP9.53□□□□□ -0.88
ZNF541-204ENST00000487275 KIAA1551Q9HCM1 1747 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 CCDC88AQ3V6T2 1871 aa9.53□□□□□ -0.88
ZNF541-204ENST00000487275 GPR75-ASB3A0A0A6YYF3 556 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 PLCG2P16885 1265 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 IARSP41252 1262 aaKnown RBP9.52□□□□□ -0.89
ZNF541-204ENST00000487275 BTDP43251 543 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 AK2P54819 239 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 PPP4CP60510 307 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 FGD1P98174 961 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 ANKRD1Q15327 319 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 DACT2Q5SW24 774 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 DHX32Q7L7V1 743 aaKnown RBP9.52□□□□□ -0.89
ZNF541-204ENST00000487275 NIM1KQ8IY84 436 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 CERS5Q8N5B7 392 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 NLGN2Q8NFZ4 835 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 NCOA7Q8NI08 942 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 FAM163AQ96GL9 167 aaPredicted RBP9.52□□□□□ -0.89
ZNF541-204ENST00000487275 MXD3Q9BW11 206 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 ATP8A2Q9NTI2 1148 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 GAKO14976 1311 aa9.52□□□□□ -0.89
ZNF541-204ENST00000487275 YDJCA8MPS7 323 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 MINDY4BA8MYZ0 360 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 PPARAQ07869 468 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 TBC1D10CQ8IV04 446 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 TEX11Q8IYF3 940 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 SH3RF3Q8TEJ3 882 aaPredicted RBP9.51□□□□□ -0.89
ZNF541-204ENST00000487275 TEKT1Q969V4 418 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 TMX3Q96JJ7 454 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 TCEANC2Q96MN5 208 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 SLKQ9H2G2 1235 aaPredicted RBP9.51□□□□□ -0.89
ZNF541-204ENST00000487275 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
ZNF541-204ENST00000487275 KCNQ5Q9NR82 932 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 LIMCH1Q9UPQ0 1083 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 DAGLAQ9Y4D2 1042 aa9.51□□□□□ -0.89
ZNF541-204ENST00000487275 SLC3A2P08195 630 aaKnown RBP9.5□□□□□ -0.89
ZNF541-204ENST00000487275 MCM5P33992 734 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 CRKP46108 304 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 SCNN1DP51172 638 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 AKNAD1Q5T1N1 836 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 HHIPL2Q6UWX4 724 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 MFSD6Q6ZSS7 791 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 Q6ZUG5 572 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 KIAA0825Q8IV33 1275 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 AMOTL1Q8IY63 956 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 TGFBRAP1Q8WUH2 860 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 JDP2Q8WYK2 163 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 ZSCAN31Q96LW9 406 aaPredicted RBP9.5□□□□□ -0.89
ZNF541-204ENST00000487275 ALDH8A1Q9H2A2 487 aaPredicted RBP9.5□□□□□ -0.89
ZNF541-204ENST00000487275 CNNM2Q9H8M5 875 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 DCP1AQ9NPI6 582 aaPredicted RBP9.5□□□□□ -0.89
ZNF541-204ENST00000487275 SH2B1Q9NRF2 756 aaPredicted RBP9.5□□□□□ -0.89
ZNF541-204ENST00000487275 TOMM22Q9NS69 142 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 FOXD4L1Q9NU39 408 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 ARPP21Q9UBL0 812 aaPredicted RBP9.5□□□□□ -0.89
ZNF541-204ENST00000487275 ZNRF3Q9ULT6 936 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 CHD4Q14839 1912 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 MYO3BQ8WXR4 1341 aa9.5□□□□□ -0.89
ZNF541-204ENST00000487275 USP17L12C9JPN9 530 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 USP17L21D6R901 530 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 NFKBIEO00221 500 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 RAD17O75943 681 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 RBM5P52756 815 aaKnown RBP eCLIP9.49□□□□□ -0.89
ZNF541-204ENST00000487275 HDLBPQ00341 1268 aaKnown RBP9.49□□□□□ -0.89
ZNF541-204ENST00000487275 EXOSC10Q01780 885 aaKnown RBP9.49□□□□□ -0.89
ZNF541-204ENST00000487275 SBK1Q52WX2 424 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 RRP12Q5JTH9 1297 aaKnown RBP9.49□□□□□ -0.89
ZNF541-204ENST00000487275 RSBN1LQ6PCB5 846 aaPredicted RBP9.49□□□□□ -0.89
ZNF541-204ENST00000487275 CTR9Q6PD62 1173 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 MAPKAPK5Q8IW41 473 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 MB21D2Q8IYB1 491 aaPredicted RBP9.49□□□□□ -0.89
ZNF541-204ENST00000487275 LARP6Q9BRS8 491 aaKnown RBP9.49□□□□□ -0.89
ZNF541-204ENST00000487275 MRIQ9BWK5 157 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 LRRC2Q9BYS8 371 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 KRT23Q9C075 422 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 FHDC1Q9C0D6 1143 aaPredicted RBP9.49□□□□□ -0.89
ZNF541-204ENST00000487275 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 MCM9Q9NXL9 1143 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 ANAPC4Q9UJX5 808 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 HDAC9Q9UKV0 1011 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 NEDD4P46934 1319 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 LTBP3Q9NS15 1303 aa9.49□□□□□ -0.89
ZNF541-204ENST00000487275 BRCA1P38398 1863 aaKnown RBP9.49□□□□□ -0.89
ZNF541-204ENST00000487275 B4E1Z4 1266 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 PSMD14O00487 310 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms