RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 DNAJC2Q99543 621 aaKnown RBP7.68□□□□□ -1.18
PRPF38A-203ENST00000487160 ROBO2Q9HCK4 1378 aa7.68□□□□□ -1.18
PRPF38A-203ENST00000487160 TM4SF5O14894 197 aa7.67□□□□□ -1.18
PRPF38A-203ENST00000487160 TRIM37O94972 964 aa7.67□□□□□ -1.18
PRPF38A-203ENST00000487160 MAOBP27338 520 aa7.67□□□□□ -1.18
PRPF38A-203ENST00000487160 POU4F3Q15319 338 aa7.67□□□□□ -1.18
PRPF38A-203ENST00000487160 SLITRK4Q8IW52 837 aa7.67□□□□□ -1.18
PRPF38A-203ENST00000487160 ZNF775Q96BV0 537 aaPredicted RBP7.67□□□□□ -1.18
PRPF38A-203ENST00000487160 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
PRPF38A-203ENST00000487160 SHROOM4Q9ULL8 1493 aa7.67□□□□□ -1.18
PRPF38A-203ENST00000487160 EIF4EBP3O60516 100 aaPredicted RBP7.66□□□□□ -1.18
PRPF38A-203ENST00000487160 CILPO75339 1184 aa7.66□□□□□ -1.18
PRPF38A-203ENST00000487160 HOXB4P17483 251 aaPredicted RBP7.66□□□□□ -1.18
PRPF38A-203ENST00000487160 SOX9P48436 509 aa7.66□□□□□ -1.18
PRPF38A-203ENST00000487160 KLHL23Q8NBE8 558 aa7.66□□□□□ -1.18
PRPF38A-203ENST00000487160 ARMC5Q96C12 935 aa7.66□□□□□ -1.18
PRPF38A-203ENST00000487160 CORO1BQ9BR76 489 aa7.66□□□□□ -1.18
PRPF38A-203ENST00000487160 RRAGCQ9HB90 399 aa7.66□□□□□ -1.18
PRPF38A-203ENST00000487160 DDX3YO15523 660 aaKnown RBP7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 STK10O94804 968 aaKnown RBP7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 SSBP05455 408 aaKnown RBP eCLIP7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 CTSBP07858 339 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 MCM4P33991 863 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 DGKGP49619 791 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 NLRP12P59046 1061 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 COL9A2Q14055 689 aaPredicted RBP7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 MPP2Q14168 576 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 SUZ12Q15022 739 aaKnown RBP7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 TRAPPC3LQ5T215 181 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 ZNF385CQ66K41 422 aaPredicted RBP7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 SCARA3Q6AZY7 606 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 NEDD1Q8NHV4 660 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 GPBAR1Q8TDU6 330 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 LRRC3Q9BY71 257 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 CCDC86Q9H6F5 360 aaKnown RBP7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 CACNA2D2Q9NY47 1150 aa7.65□□□□□ -1.18
PRPF38A-203ENST00000487160 DEAF1O75398 565 aaPredicted RBP7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 CDK8P49336 464 aa7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 RPL6Q02878 288 aaKnown RBP7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 RBL2Q08999 1139 aa7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 CWF19L2Q2TBE0 894 aaKnown RBP7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 REC114Q7Z4M0 266 aa7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 MAP4K3Q8IVH8 894 aa7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 ACSBG1Q96GR2 724 aa7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 USP26Q9BXU7 913 aa7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 BRMS1Q9HCU9 246 aa7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 KRT82Q9NSB4 513 aa7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 KCNK4Q9NYG8 393 aa7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 PCDHA4Q9UN74 947 aa7.64□□□□□ -1.19
PRPF38A-203ENST00000487160 ADAM11O75078 769 aa7.63□□□□□ -1.19
PRPF38A-203ENST00000487160 BPNT1O95861 308 aa7.63□□□□□ -1.19
PRPF38A-203ENST00000487160 LIG1P18858 919 aa7.63□□□□□ -1.19
PRPF38A-203ENST00000487160 CD68P34810 354 aaPredicted RBP7.63□□□□□ -1.19
PRPF38A-203ENST00000487160 PDE3AQ14432 1141 aa7.63□□□□□ -1.19
PRPF38A-203ENST00000487160 DIEXFQ68CQ4 756 aaKnown RBP7.63□□□□□ -1.19
PRPF38A-203ENST00000487160 TREML4Q6UXN2 200 aa7.63□□□□□ -1.19
PRPF38A-203ENST00000487160 CPLX3Q8WVH0 158 aa7.63□□□□□ -1.19
PRPF38A-203ENST00000487160 PPT2Q9UMR5 302 aa7.63□□□□□ -1.19
PRPF38A-203ENST00000487160 MRVI1Q9Y6F6 885 aa7.63□□□□□ -1.19
PRPF38A-203ENST00000487160 LOC100289279A0A1B0GTE1 492 aa7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 ZNF862O60290 1169 aa7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 SELPP16109 830 aa7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 FOXD4L6Q3SYB3 417 aaPredicted RBP7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 FOXD4L3Q6VB84 417 aaPredicted RBP7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 CCDC81Q6ZN84 652 aa7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 DPH6Q7L8W6 267 aa7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 PMFBP1Q8TBY8 1022 aa7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 WDR89Q96FK6 387 aaPredicted RBP7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 HIRIP3Q9BW71 556 aaPredicted RBP7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 LNPKQ9C0E8 428 aa7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 ZNF408Q9H9D4 720 aa7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 ENAMQ9NRM1 1142 aa7.62□□□□□ -1.19
PRPF38A-203ENST00000487160 DLGAP3O95886 979 aa7.61□□□□□ -1.19
PRPF38A-203ENST00000487160 ETFBP38117 255 aa7.61□□□□□ -1.19
PRPF38A-203ENST00000487160 ZNF165P49910 485 aa7.61□□□□□ -1.19
PRPF38A-203ENST00000487160 INPP5AQ14642 412 aa7.61□□□□□ -1.19
PRPF38A-203ENST00000487160 GK5Q6ZS86 529 aa7.61□□□□□ -1.19
PRPF38A-203ENST00000487160 SVOPQ8N4V2 548 aa7.61□□□□□ -1.19
PRPF38A-203ENST00000487160 DTWD1Q8N5C7 304 aa7.61□□□□□ -1.19
PRPF38A-203ENST00000487160 TRIM11Q96F44 468 aa7.61□□□□□ -1.19
PRPF38A-203ENST00000487160 SRRTQ9BXP5 876 aaKnown RBP7.61□□□□□ -1.19
PRPF38A-203ENST00000487160 STRIP2Q9ULQ0 834 aa7.61□□□□□ -1.19
PRPF38A-203ENST00000487160 A0A0A0MRY4 1105 aa7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 GRIN3BO60391 1043 aa7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 SNRPNP63162 240 aaKnown RBP7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 CLCQ05315 142 aa7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 FBXW10Q5XX13 1052 aa7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 LRFN4Q6PJG9 635 aa7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 LINC00114Q6XXX2 140 aa7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 FBXO11Q86XK2 927 aa7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 ANAPC16Q96DE5 110 aa7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 FERD3LQ96RJ6 166 aa7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 POLR3KQ9Y2Y1 108 aaPredicted RBP7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 PCDHB14Q9Y5E9 798 aa7.6□□□□□ -1.19
PRPF38A-203ENST00000487160 GFRA2O00451 464 aa7.59□□□□□ -1.19
PRPF38A-203ENST00000487160 WIPI1Q5MNZ9 446 aaPredicted RBP7.59□□□□□ -1.19
PRPF38A-203ENST00000487160 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
PRPF38A-203ENST00000487160 FMR1NBQ8N0W7 255 aaPredicted RBP7.59□□□□□ -1.19
PRPF38A-203ENST00000487160 REXO1Q8N1G1 1221 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms