RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 HMGB1P09429 215 aaKnown RBP10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 DPEP1P16444 411 aa10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 RGS19P49795 217 aa10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 LBX1P52954 281 aa10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 TGFB2P61812 414 aa10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 COL9A3Q14050 684 aaPredicted RBP10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 ARHGAP27Q6ZUM4 889 aa10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 IFNL3Q8IZI9 196 aa10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 MIGA1Q8NAN2 632 aa10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 TBC1D22AQ8WUA7 517 aa10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 MKRN1Q9UHC7 482 aaKnown RBP10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 CIZ1Q9ULV3 898 aaPredicted RBP10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
NUDCD3-209ENST00000487118 ZNF213O14771 459 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 RIMBP2O15034 1052 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 PRKAB2O43741 272 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 PPP4CP60510 307 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 GSTO1P78417 241 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 EXOSC10Q01780 885 aaKnown RBP10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 ANKRD1Q15327 319 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 GRIK5Q16478 980 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 GIMAP6Q6P9H5 292 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 DHX32Q7L7V1 743 aaKnown RBP10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 DZIP1Q86YF9 867 aaKnown RBP10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 TTLL6Q8N841 843 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 SUPT20HQ8NEM7 779 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 INTS4Q96HW7 963 aaKnown RBP10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 ZSCAN31Q96LW9 406 aaPredicted RBP10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 NACAP1Q9BZK3 213 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 NBPF3Q9H094 633 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 NAPBQ9H115 298 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 SLKQ9H2G2 1235 aaPredicted RBP10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 CHMP5Q9NZZ3 219 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 LIMCH1Q9UPQ0 1083 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 JAG2Q9Y219 1238 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 SLC4A4Q9Y6R1 1079 aa10.21□□□□□ -0.77
NUDCD3-209ENST00000487118 MROH7-TTC4A0A0A0MT08 1334 aa10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 ZNF646O15015 1829 aaPredicted RBP10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 APPP05067 770 aa10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 LDHCP07864 332 aa10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 CTCFP49711 727 aaPredicted RBP10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 FKBP1AP62942 108 aaKnown RBP10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 DYNLL1P63167 89 aaKnown RBP10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 TOB2Q14106 344 aaPredicted RBP10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 CCDC93Q567U6 631 aa10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 PODNQ7Z5L7 613 aa10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 FBXL16Q8N461 479 aa10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 SPRYD3Q8NCJ5 442 aa10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 WDR19Q8NEZ3 1342 aa10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 FAM163AQ96GL9 167 aaPredicted RBP10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 AGXT2Q9BYV1 514 aa10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 CWC22Q9HCG8 908 aaKnown RBP10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 SH2B1Q9NRF2 756 aaPredicted RBP10.2□□□□□ -0.78
NUDCD3-209ENST00000487118 GAKO14976 1311 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 HSP90AA1P07900 732 aaKnown RBP10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 HAND2P61296 217 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 GTF2IP78347 998 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 KIAA2012Q0VF49 1180 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 MFSD14BQ5SR56 506 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 CERS3Q8IU89 383 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 TBC1D10CQ8IV04 446 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 MB21D2Q8IYB1 491 aaPredicted RBP10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 RTKN2Q8IZC4 609 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 PSMD1Q99460 953 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 CRNKL1Q9BZJ0 848 aaKnown RBP10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 RRAGCQ9HB90 399 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 ANAPC4Q9UJX5 808 aa10.19□□□□□ -0.78
NUDCD3-209ENST00000487118 GPR75-ASB3A0A0A6YYF3 556 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 DLL1O00548 723 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 C21orf2O43822 256 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 LARGE1O95461 756 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 TDO2P48775 406 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 DOK7Q18PE1 504 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 SOGA3Q5TF21 947 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 Q6ZUG5 572 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 NOL8Q76FK4 1167 aaKnown RBP10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 SLF2Q8IX21 1173 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 CERS5Q8N5B7 392 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 SMC1BQ8NDV3 1235 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 NCOA7Q8NI08 942 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 SDR42E1Q8WUS8 393 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 STAG1Q8WVM7 1258 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 TCEANC2Q96MN5 208 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 VPS33BQ9H267 617 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 ATP8A2Q9NTI2 1148 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 AATFQ9NY61 560 aaKnown RBP eCLIP10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 PIM2Q9P1W9 311 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 ZNF219Q9P2Y4 722 aaPredicted RBP10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 TPCN1Q9ULQ1 816 aa10.18□□□□□ -0.78
NUDCD3-209ENST00000487118 ECE2O60344 883 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 BAG3O95817 575 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 EVCP57679 992 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 ANTXR2P58335 489 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 ST3GAL1Q11201 340 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 DIXDC1Q155Q3 683 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 ME3Q16798 604 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 SBK1Q52WX2 424 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 AKNAD1Q5T1N1 836 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 STRIP1Q5VSL9 837 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 C9orf131Q5VYM1 1079 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms