RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TRDNQ13061 729 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 DPP8Q6V1X1 898 aaPredicted RBP8.35□□□□□ -1.07
SF3A3-206ENST00000487062 DHX32Q7L7V1 743 aaKnown RBP8.35□□□□□ -1.07
SF3A3-206ENST00000487062 RALYLQ86SE5 291 aaKnown RBP8.35□□□□□ -1.07
SF3A3-206ENST00000487062 TXNRD3Q86VQ6 643 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 DZIP1Q86YF9 867 aaKnown RBP8.35□□□□□ -1.07
SF3A3-206ENST00000487062 NCOA7Q8NI08 942 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 CHMP4CQ96CF2 233 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 EYA3Q99504 573 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 NOL10Q9BSC4 688 aaKnown RBP8.35□□□□□ -1.07
SF3A3-206ENST00000487062 NAPBQ9H115 298 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 ARMT1Q9H993 441 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 CD209Q9NNX6 404 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 SLC4A4Q9Y6R1 1079 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 MYH2Q9UKX2 1941 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 G3V3G9 751 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 FOXP2O15409 715 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 PPP1R37O75864 691 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 IL1R1P14778 569 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 TDO2P48775 406 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 RAB3GAP1Q15042 981 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 NFKBIBQ15653 356 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 CC2D2BQ6DHV5 1058 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 TTLL5Q6EMB2 1281 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 CHRDL2Q6WN34 429 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 Q6ZUG5 572 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 CERS3Q8IU89 383 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 SLF2Q8IX21 1173 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 IFNL3Q8IZI9 196 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 MIGA1Q8NAN2 632 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 TBC1D22AQ8WUA7 517 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 NSUN4Q96CB9 384 aaKnown RBP8.34□□□□□ -1.07
SF3A3-206ENST00000487062 ZC3H12CQ9C0D7 883 aaKnown RBP8.34□□□□□ -1.07
SF3A3-206ENST00000487062 COA1Q9GZY4 146 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 POLLQ9UGP5 575 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 TIAM2Q8IVF5 1701 aa8.34□□□□□ -1.07
SF3A3-206ENST00000487062 SLX4Q8IY92 1834 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 WDR19Q8NEZ3 1342 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 GSG1L2A8MUP6 293 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 PDIA4P13667 645 aaKnown RBP8.33□□□□□ -1.08
SF3A3-206ENST00000487062 MCM5P33992 734 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 HAND2P61296 217 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 EXOSC10Q01780 885 aaKnown RBP8.33□□□□□ -1.08
SF3A3-206ENST00000487062 MECOMQ03112 1051 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 GRIPAP1Q4V328 841 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 GIMAP6Q6P9H5 292 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 STOX1Q6ZVD7 989 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 LCORLQ8N3X6 602 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 FBXO22Q8NEZ5 403 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 GBP4Q96PP9 640 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 CRNKL1Q9BZJ0 848 aaKnown RBP8.33□□□□□ -1.08
SF3A3-206ENST00000487062 CNNM2Q9H8M5 875 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 SMC3Q9UQE7 1217 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 CLEC11AQ9Y240 323 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 ARIH1Q9Y4X5 557 aaPredicted RBP8.33□□□□□ -1.08
SF3A3-206ENST00000487062 TAF6LQ9Y6J9 622 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 KIF13BQ9NQT8 1826 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 LAMB1P07942 1786 aa8.33□□□□□ -1.08
SF3A3-206ENST00000487062 FAM205AQ6ZU69 1335 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 C10orf71Q711Q0 1435 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 BAG3O95817 575 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 PTMSP20962 102 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 PRDX5P30044 214 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 TOB2Q14106 344 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-206ENST00000487062 ME3Q16798 604 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 CCDC83Q8IWF9 413 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 FBXL16Q8N461 479 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 SUPT20HQ8NEM7 779 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 GPR101Q96P66 508 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-206ENST00000487062 RIOK1Q9BRS2 568 aaKnown RBP8.32□□□□□ -1.08
SF3A3-206ENST00000487062 AGXT2Q9BYV1 514 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 KRT23Q9C075 422 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 RNF41Q9H4P4 317 aaPredicted RBP8.32□□□□□ -1.08
SF3A3-206ENST00000487062 ATP8A2Q9NTI2 1148 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 TPCN1Q9ULQ1 816 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 SUGT1Q9Y2Z0 365 aa8.32□□□□□ -1.08
SF3A3-206ENST00000487062 BAZ2AQ9UIF9 1905 aaKnown RBP8.32□□□□□ -1.08
SF3A3-206ENST00000487062 GOLGA6L22H0YM25 854 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 RIMBP2O15034 1052 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 PRC1O43663 620 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 PRKAB2O43741 272 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 PLCG2P16885 1265 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 POLD1P28340 1107 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 CHRNA5P30532 468 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 DYNLL1P63167 89 aaKnown RBP8.31□□□□□ -1.08
SF3A3-206ENST00000487062 AKNAD1Q5T1N1 836 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 MFSD6Q6ZSS7 791 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 ADGRA1Q86SQ6 560 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 MB21D2Q8IYB1 491 aaPredicted RBP8.31□□□□□ -1.08
SF3A3-206ENST00000487062 BRF1Q92994 677 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 TMEM87BQ96K49 555 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 TCEANC2Q96MN5 208 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
SF3A3-206ENST00000487062 EPB41L4AQ9HCS5 686 aaPredicted RBP8.31□□□□□ -1.08
SF3A3-206ENST00000487062 AATFQ9NY61 560 aaKnown RBP eCLIP8.31□□□□□ -1.08
SF3A3-206ENST00000487062 JAG2Q9Y219 1238 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 NAV1Q8NEY1 1877 aa8.31□□□□□ -1.08
SF3A3-206ENST00000487062 WDR33Q9C0J8 1336 aaKnown RBP8.3□□□□□ -1.08
SF3A3-206ENST00000487062 CDK5RAP2Q96SN8 1893 aa8.3□□□□□ -1.08
SF3A3-206ENST00000487062 A0A0G2JLW4 131 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms