RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SOX1O00570 391 aaPredicted RBP9.71□□□□□ -0.86
PDPN-205ENST00000487038 SLC4A2P04920 1241 aa9.71□□□□□ -0.86
PDPN-205ENST00000487038 CTGFP29279 349 aa9.71□□□□□ -0.86
PDPN-205ENST00000487038 PRKCZQ05513 592 aa9.71□□□□□ -0.86
PDPN-205ENST00000487038 FLIIQ13045 1269 aa9.71□□□□□ -0.86
PDPN-205ENST00000487038 UBE4AQ14139 1066 aa9.71□□□□□ -0.86
PDPN-205ENST00000487038 FKBP1CQ5VVH2 108 aa9.71□□□□□ -0.86
PDPN-205ENST00000487038 VPS37DQ86XT2 251 aa9.71□□□□□ -0.86
PDPN-205ENST00000487038 DNAAF4Q8WXU2 420 aa9.71□□□□□ -0.86
PDPN-205ENST00000487038 STXBP5LQ9Y2K9 1186 aa9.71□□□□□ -0.86
PDPN-205ENST00000487038 VCANP13611 3396 aa9.71□□□□□ -0.86
PDPN-205ENST00000487038 PHIPQ8WWQ0 1821 aa9.7□□□□□ -0.86
PDPN-205ENST00000487038 ATAD5Q96QE3 1844 aa9.7□□□□□ -0.86
PDPN-205ENST00000487038 FRAT2O75474 233 aaPredicted RBP9.7□□□□□ -0.86
PDPN-205ENST00000487038 TFRCP02786 760 aaKnown RBP9.7□□□□□ -0.86
PDPN-205ENST00000487038 BMP8BP34820 402 aa9.7□□□□□ -0.86
PDPN-205ENST00000487038 TWISTNBQ3B726 338 aaPredicted RBP9.7□□□□□ -0.86
PDPN-205ENST00000487038 NECAB2Q7Z6G3 386 aa9.7□□□□□ -0.86
PDPN-205ENST00000487038 DEFB123Q8N688 67 aa9.7□□□□□ -0.86
PDPN-205ENST00000487038 TSPYL6Q8N831 410 aa9.7□□□□□ -0.86
PDPN-205ENST00000487038 PXYLP1Q8TE99 480 aa9.7□□□□□ -0.86
PDPN-205ENST00000487038 UNC93B1Q9H1C4 597 aa9.7□□□□□ -0.86
PDPN-205ENST00000487038 STAP2Q9UGK3 403 aa9.7□□□□□ -0.86
PDPN-205ENST00000487038 SPTBN5Q9NRC6 3674 aaKnown RBP9.7□□□□□ -0.86
PDPN-205ENST00000487038 APAF1O14727 1248 aa9.69□□□□□ -0.86
PDPN-205ENST00000487038 ADCY3O60266 1144 aa9.69□□□□□ -0.86
PDPN-205ENST00000487038 INHAP05111 366 aa9.69□□□□□ -0.86
PDPN-205ENST00000487038 LAMA2P24043 3122 aaKnown RBP9.69□□□□□ -0.86
PDPN-205ENST00000487038 GYG1P46976 350 aa9.69□□□□□ -0.86
PDPN-205ENST00000487038 CACNB3P54284 484 aa9.69□□□□□ -0.86
PDPN-205ENST00000487038 CAVIN4Q5BKX8 364 aa9.69□□□□□ -0.86
PDPN-205ENST00000487038 FRMPD3Q5JV73 1810 aa9.69□□□□□ -0.86
PDPN-205ENST00000487038 EYSQ5T1H1 3165 aa9.69□□□□□ -0.86
PDPN-205ENST00000487038 DEFB118Q96PH6 123 aa9.69□□□□□ -0.86
PDPN-205ENST00000487038 KCNH4Q9UQ05 1017 aa9.69□□□□□ -0.86
PDPN-205ENST00000487038 LOC285556D6RIA3 1793 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 MROH5Q6ZUA9 1318 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 TNPO2O14787 897 aaKnown RBP9.68□□□□□ -0.86
PDPN-205ENST00000487038 BCRP11274 1271 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 FOXO4P98177 505 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 CHAF1AQ13111 956 aaPredicted RBP9.68□□□□□ -0.86
PDPN-205ENST00000487038 IRF5Q13568 498 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 LMBR1LQ6UX01 489 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 G2E3Q7L622 706 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 ANKLE1Q8NAG6 615 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 FAM84BQ96KN1 310 aaPredicted RBP9.68□□□□□ -0.86
PDPN-205ENST00000487038 ZDHHC15Q96MV8 337 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 SUGT1Q9Y2Z0 365 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 MYH2Q9UKX2 1941 aa9.68□□□□□ -0.86
PDPN-205ENST00000487038 INPP5BP32019 993 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 FLT3LGP49771 235 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 LRIT3Q3SXY7 679 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 NOL9Q5SY16 702 aaKnown RBP9.67□□□□□ -0.86
PDPN-205ENST00000487038 MIGA2Q7L4E1 593 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 FASTKD5Q7L8L6 764 aaKnown RBP9.67□□□□□ -0.86
PDPN-205ENST00000487038 C7orf61Q8IZ16 206 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 TDHQ8IZJ6 230 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 SMCR8Q8TEV9 937 aaPredicted RBP9.67□□□□□ -0.86
PDPN-205ENST00000487038 TSR2Q969E8 191 aaKnown RBP9.67□□□□□ -0.86
PDPN-205ENST00000487038 COA7Q96BR5 231 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 PAWRQ96IZ0 340 aaKnown RBP9.67□□□□□ -0.86
PDPN-205ENST00000487038 ZNF594Q96JF6 807 aaPredicted RBP9.67□□□□□ -0.86
PDPN-205ENST00000487038 GDF15Q99988 308 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 MRIQ9BWK5 157 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 PAK6Q9NQU5 681 aaPredicted RBP9.67□□□□□ -0.86
PDPN-205ENST00000487038 TAOK2Q9UL54 1235 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 GABRQQ9UN88 632 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 MAST2Q6P0Q8 1798 aa9.67□□□□□ -0.86
PDPN-205ENST00000487038 CXCL11O14625 94 aa9.66□□□□□ -0.86
PDPN-205ENST00000487038 CYP2C8P10632 490 aa9.66□□□□□ -0.86
PDPN-205ENST00000487038 ELNP15502 786 aa9.66□□□□□ -0.86
PDPN-205ENST00000487038 HHIPL2Q6UWX4 724 aa9.66□□□□□ -0.86
PDPN-205ENST00000487038 FAM151AQ8WW52 585 aa9.66□□□□□ -0.86
PDPN-205ENST00000487038 CRISPLD2Q9H0B8 497 aa9.66□□□□□ -0.86
PDPN-205ENST00000487038 IQSEC3Q9UPP2 1182 aaPredicted RBP9.66□□□□□ -0.86
PDPN-205ENST00000487038 SLC45A1Q9Y2W3 748 aa9.66□□□□□ -0.86
PDPN-205ENST00000487038 DOCK3Q8IZD9 2030 aa9.66□□□□□ -0.86
PDPN-205ENST00000487038 GRM8O00222 908 aa9.65□□□□□ -0.86
PDPN-205ENST00000487038 ZEB1P37275 1124 aaPredicted RBP9.65□□□□□ -0.86
PDPN-205ENST00000487038 BCAMP50895 628 aa9.65□□□□□ -0.86
PDPN-205ENST00000487038 MOGSQ13724 837 aa9.65□□□□□ -0.86
PDPN-205ENST00000487038 APOBEC3HQ6NTF7 200 aaKnown RBP9.65□□□□□ -0.86
PDPN-205ENST00000487038 GADL1Q6ZQY3 521 aa9.65□□□□□ -0.86
PDPN-205ENST00000487038 Q7L0L9 218 aa9.65□□□□□ -0.86
PDPN-205ENST00000487038 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDPN-205ENST00000487038 COL25A1Q9BXS0 654 aaPredicted RBP9.65□□□□□ -0.86
PDPN-205ENST00000487038 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDPN-205ENST00000487038 PICK1Q9NRD5 415 aa9.65□□□□□ -0.86
PDPN-205ENST00000487038 C9orf78Q9NZ63 289 aaPredicted RBP9.65□□□□□ -0.86
PDPN-205ENST00000487038 ZNF112Q9UJU3 913 aa9.65□□□□□ -0.86
PDPN-205ENST00000487038 PNMA3Q9UL41 463 aa9.65□□□□□ -0.86
PDPN-205ENST00000487038 PLXNB2O15031 1838 aa9.65□□□□□ -0.86
PDPN-205ENST00000487038 NCOR1O75376 2440 aa9.65□□□□□ -0.86
PDPN-205ENST00000487038 A0A0G2JLL6 359 aaPredicted RBP9.64□□□□□ -0.87
PDPN-205ENST00000487038 HMGCRP04035 888 aa9.64□□□□□ -0.87
PDPN-205ENST00000487038 GRIK5Q16478 980 aa9.64□□□□□ -0.87
PDPN-205ENST00000487038 BEND3Q5T5X7 828 aa9.64□□□□□ -0.87
PDPN-205ENST00000487038 GPAT2Q6NUI2 795 aa9.64□□□□□ -0.87
PDPN-205ENST00000487038 PRRT2Q7Z6L0 340 aaPredicted RBP9.64□□□□□ -0.87
PDPN-205ENST00000487038 FBXO33Q7Z6M2 555 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms