RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 THEGQ9P2T0 379 aa10.83□□□□□ -0.68
APTX-228ENST00000486724 TSPYL4Q9UJ04 414 aa10.83□□□□□ -0.68
APTX-228ENST00000486724 OGDHLQ9ULD0 1010 aa10.83□□□□□ -0.68
APTX-228ENST00000486724 LEMD3Q9Y2U8 911 aa10.83□□□□□ -0.68
APTX-228ENST00000486724 RBM19Q9Y4C8 960 aaKnown RBP10.83□□□□□ -0.68
APTX-228ENST00000486724 PDE8AO60658 829 aa10.82□□□□□ -0.68
APTX-228ENST00000486724 HMGCRP04035 888 aa10.82□□□□□ -0.68
APTX-228ENST00000486724 TNNI2P48788 182 aa10.82□□□□□ -0.68
APTX-228ENST00000486724 CCDC184Q52MB2 194 aa10.82□□□□□ -0.68
APTX-228ENST00000486724 TMEM39BQ9GZU3 492 aa10.82□□□□□ -0.68
APTX-228ENST00000486724 HMX1Q9NP08 348 aaPredicted RBP10.82□□□□□ -0.68
APTX-228ENST00000486724 BSDC1Q9NW68 430 aaPredicted RBP10.82□□□□□ -0.68
APTX-228ENST00000486724 ZNF70Q9UC06 446 aaPredicted RBP10.82□□□□□ -0.68
APTX-228ENST00000486724 MAST2Q6P0Q8 1798 aa10.82□□□□□ -0.68
APTX-228ENST00000486724 COL6A1P12109 1028 aa10.81□□□□□ -0.68
APTX-228ENST00000486724 KLRK1P26718 216 aa10.81□□□□□ -0.68
APTX-228ENST00000486724 FKBP1AP62942 108 aaKnown RBP10.81□□□□□ -0.68
APTX-228ENST00000486724 LRRC26Q2I0M4 334 aa10.81□□□□□ -0.68
APTX-228ENST00000486724 P2RX7Q99572 595 aaKnown RBP10.81□□□□□ -0.68
APTX-228ENST00000486724 LRFN3Q9BTN0 628 aa10.81□□□□□ -0.68
APTX-228ENST00000486724 MUC6Q6W4X9 2439 aa10.81□□□□□ -0.68
APTX-228ENST00000486724 LTBP2Q14767 1821 aa10.8□□□□□ -0.68
APTX-228ENST00000486724 TCP10L2B9ZVM9 353 aa10.8□□□□□ -0.68
APTX-228ENST00000486724 NEFMP07197 916 aa10.8□□□□□ -0.68
APTX-228ENST00000486724 CYP2C8P10632 490 aa10.8□□□□□ -0.68
APTX-228ENST00000486724 MRPS5P82675 430 aaKnown RBP10.8□□□□□ -0.68
APTX-228ENST00000486724 COA7Q96BR5 231 aa10.8□□□□□ -0.68
APTX-228ENST00000486724 CD209Q9NNX6 404 aa10.8□□□□□ -0.68
APTX-228ENST00000486724 KCNH4Q9UQ05 1017 aa10.8□□□□□ -0.68
APTX-228ENST00000486724 NEFLP07196 543 aa10.79□□□□□ -0.68
APTX-228ENST00000486724 MOGSQ13724 837 aa10.79□□□□□ -0.68
APTX-228ENST00000486724 SHHQ15465 462 aa10.79□□□□□ -0.68
APTX-228ENST00000486724 HOOK2Q96ED9 719 aa10.79□□□□□ -0.68
APTX-228ENST00000486724 TDRD3Q9H7E2 651 aaKnown RBP10.79□□□□□ -0.68
APTX-228ENST00000486724 CHPF2Q9P2E5 772 aa10.79□□□□□ -0.68
APTX-228ENST00000486724 PRKAG2Q9UGJ0 569 aa10.79□□□□□ -0.68
APTX-228ENST00000486724 PCCAP05165 728 aaPredicted RBP10.78□□□□□ -0.68
APTX-228ENST00000486724 KCNJ4P48050 445 aa10.78□□□□□ -0.68
APTX-228ENST00000486724 CTSWP56202 376 aa10.78□□□□□ -0.68
APTX-228ENST00000486724 ANKRD2Q9GZV1 360 aa10.78□□□□□ -0.68
APTX-228ENST00000486724 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
APTX-228ENST00000486724 SERPINA10Q9UK55 444 aa10.78□□□□□ -0.68
APTX-228ENST00000486724 MAPK8IP2Q13387 824 aaPredicted RBP10.77□□□□□ -0.69
APTX-228ENST00000486724 GRIN2CQ14957 1233 aa10.77□□□□□ -0.69
APTX-228ENST00000486724 TMEM31Q5JXX7 168 aa10.77□□□□□ -0.69
APTX-228ENST00000486724 C9orf50Q5SZB4 431 aa10.77□□□□□ -0.69
APTX-228ENST00000486724 DCAF15Q66K64 600 aa10.77□□□□□ -0.69
APTX-228ENST00000486724 MYH3P11055 1940 aa10.76□□□□□ -0.69
APTX-228ENST00000486724 MRE11P49959 708 aa10.76□□□□□ -0.69
APTX-228ENST00000486724 GPAT2Q6NUI2 795 aa10.76□□□□□ -0.69
APTX-228ENST00000486724 RIC3Q7Z5B4 369 aa10.76□□□□□ -0.69
APTX-228ENST00000486724 DZIP1LQ8IYY4 767 aaKnown RBP10.76□□□□□ -0.69
APTX-228ENST00000486724 CCDC191Q8NCU4 936 aa10.76□□□□□ -0.69
APTX-228ENST00000486724 SMCR8Q8TEV9 937 aaPredicted RBP10.76□□□□□ -0.69
APTX-228ENST00000486724 BABAM1Q9NWV8 329 aa10.76□□□□□ -0.69
APTX-228ENST00000486724 REV3LO60673 3130 aa10.75□□□□□ -0.69
APTX-228ENST00000486724 IL1R1P14778 569 aa10.75□□□□□ -0.69
APTX-228ENST00000486724 IGHMBP2P38935 993 aaKnown RBP10.75□□□□□ -0.69
APTX-228ENST00000486724 TRIM32Q13049 653 aa10.75□□□□□ -0.69
APTX-228ENST00000486724 NFE2L2Q16236 605 aa10.75□□□□□ -0.69
APTX-228ENST00000486724 ZNF804AQ7Z570 1209 aa10.75□□□□□ -0.69
APTX-228ENST00000486724 PPM1EQ8WY54 764 aa10.75□□□□□ -0.69
APTX-228ENST00000486724 NECAB3Q96P71 396 aaPredicted RBP10.75□□□□□ -0.69
APTX-228ENST00000486724 ZNF341Q9BYN7 854 aa10.75□□□□□ -0.69
APTX-228ENST00000486724 GREM2Q9H772 168 aa10.75□□□□□ -0.69
APTX-228ENST00000486724 DBF4Q9UBU7 674 aaPredicted RBP10.75□□□□□ -0.69
APTX-228ENST00000486724 INPP5BP32019 993 aa10.74□□□□□ -0.69
APTX-228ENST00000486724 AKNAD1Q5T1N1 836 aa10.74□□□□□ -0.69
APTX-228ENST00000486724 MAP3K21Q5TCX8 1036 aa10.74□□□□□ -0.69
APTX-228ENST00000486724 HDGFL1Q5TGJ6 251 aa10.74□□□□□ -0.69
APTX-228ENST00000486724 FASTKD5Q7L8L6 764 aaKnown RBP10.74□□□□□ -0.69
APTX-228ENST00000486724 TTLL11Q8NHH1 800 aa10.74□□□□□ -0.69
APTX-228ENST00000486724 GAS2L1Q99501 681 aaPredicted RBP10.74□□□□□ -0.69
APTX-228ENST00000486724 HYPKQ9NX55 129 aa10.74□□□□□ -0.69
APTX-228ENST00000486724 CWC25Q9NXE8 425 aaPredicted RBP10.74□□□□□ -0.69
APTX-228ENST00000486724 TTF2Q9UNY4 1162 aaKnown RBP10.74□□□□□ -0.69
APTX-228ENST00000486724 JAG2Q9Y219 1238 aa10.74□□□□□ -0.69
APTX-228ENST00000486724 SLC45A1Q9Y2W3 748 aa10.74□□□□□ -0.69
APTX-228ENST00000486724 DOCK3Q8IZD9 2030 aa10.74□□□□□ -0.69
APTX-228ENST00000486724 CXCL11O14625 94 aa10.73□□□□□ -0.69
APTX-228ENST00000486724 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
APTX-228ENST00000486724 GOLGA2Q08379 1002 aa10.73□□□□□ -0.69
APTX-228ENST00000486724 POTEEQ6S8J3 1075 aa10.73□□□□□ -0.69
APTX-228ENST00000486724 C15orf52Q6ZUT6 534 aaKnown RBP10.73□□□□□ -0.69
APTX-228ENST00000486724 FAM9BQ8IZU0 186 aa10.73□□□□□ -0.69
APTX-228ENST00000486724 JARID2Q92833 1246 aaPredicted RBP10.73□□□□□ -0.69
APTX-228ENST00000486724 MYD88Q99836 296 aa10.73□□□□□ -0.69
APTX-228ENST00000486724 RPAP1Q9BWH6 1393 aaPredicted RBP10.73□□□□□ -0.69
APTX-228ENST00000486724 CHD9Q3L8U1 2897 aa10.73□□□□□ -0.69
APTX-228ENST00000486724 DNAJB2P25686 324 aa10.72□□□□□ -0.69
APTX-228ENST00000486724 CRKP46108 304 aa10.72□□□□□ -0.69
APTX-228ENST00000486724 PDE3AQ14432 1141 aa10.72□□□□□ -0.69
APTX-228ENST00000486724 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
APTX-228ENST00000486724 FAM110CQ1W6H9 321 aa10.72□□□□□ -0.69
APTX-228ENST00000486724 MFSD14BQ5SR56 506 aa10.72□□□□□ -0.69
APTX-228ENST00000486724 FAM83AQ86UY5 434 aa10.72□□□□□ -0.69
APTX-228ENST00000486724 ANKRD13CQ8N6S4 541 aa10.72□□□□□ -0.69
APTX-228ENST00000486724 UBE2Q2Q8WVN8 375 aa10.72□□□□□ -0.69
APTX-228ENST00000486724 TRIB2Q92519 343 aa10.72□□□□□ -0.69
APTX-228ENST00000486724 MPHOSPH8Q99549 860 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 279.7 ms