RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 SOX11P35716 441 aa9.02□□□□□ -0.97
TMEM39A-209ENST00000486235 GATA4P43694 442 aa9.02□□□□□ -0.97
TMEM39A-209ENST00000486235 SAMD5Q5TGI4 173 aa9.02□□□□□ -0.97
TMEM39A-209ENST00000486235 AMIGO3Q86WK7 504 aa9.02□□□□□ -0.97
TMEM39A-209ENST00000486235 TNS4Q8IZW8 715 aa9.02□□□□□ -0.97
TMEM39A-209ENST00000486235 DEPDC4Q8N2C3 294 aa9.02□□□□□ -0.97
TMEM39A-209ENST00000486235 NEUROD4Q9HD90 331 aa9.02□□□□□ -0.97
TMEM39A-209ENST00000486235 IGSF1Q8N6C5 1336 aa9.02□□□□□ -0.97
TMEM39A-209ENST00000486235 ELOA3CA0A087WX78 387 aaPredicted RBP9.01□□□□□ -0.97
TMEM39A-209ENST00000486235 ELOA3DA6NLF2 546 aaPredicted RBP9.01□□□□□ -0.97
TMEM39A-209ENST00000486235 NOS2P35228 1153 aa9.01□□□□□ -0.97
TMEM39A-209ENST00000486235 SFSWAPQ12872 951 aaKnown RBP9.01□□□□□ -0.97
TMEM39A-209ENST00000486235 NCOA4Q13772 614 aa9.01□□□□□ -0.97
TMEM39A-209ENST00000486235 ELOA3BQ3SY89 546 aa9.01□□□□□ -0.97
TMEM39A-209ENST00000486235 FLAD1Q8NFF5 587 aa9.01□□□□□ -0.97
TMEM39A-209ENST00000486235 ELOA3Q8NG57 546 aa9.01□□□□□ -0.97
TMEM39A-209ENST00000486235 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
TMEM39A-209ENST00000486235 GOLGB1Q14789 3259 aaKnown RBP9.01□□□□□ -0.97
TMEM39A-209ENST00000486235 C5P01031 1676 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 RTL1A6NKG5 1358 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 SMG6Q86US8 1419 aaKnown RBP9□□□□□ -0.97
TMEM39A-209ENST00000486235 FAM229AH3BQW9 127 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 SPATA31C1P0DKV0 1188 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 MCM6Q14566 821 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 HSP90AB2PQ58FF8 381 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 SH3PXD2AQ5TCZ1 1133 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 SLC9A9Q8IVB4 645 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 PUS7Q96PZ0 661 aaKnown RBP9□□□□□ -0.97
TMEM39A-209ENST00000486235 SLC30A3Q99726 388 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 CGNL1Q0VF96 1302 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 PCDH11XQ9BZA7 1347 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 PCDH11YQ9BZA8 1340 aa9□□□□□ -0.97
TMEM39A-209ENST00000486235 ST20-MTHFSA0A0A6YYL1 179 aa8.99□□□□□ -0.97
TMEM39A-209ENST00000486235 CYP27B1O15528 508 aa8.99□□□□□ -0.97
TMEM39A-209ENST00000486235 LAMC2Q13753 1193 aa8.99□□□□□ -0.97
TMEM39A-209ENST00000486235 C8orf86Q6ZUL3 223 aa8.99□□□□□ -0.97
TMEM39A-209ENST00000486235 TESK2Q96S53 571 aa8.99□□□□□ -0.97
TMEM39A-209ENST00000486235 C4BP0C0L5 1744 aa8.98□□□□□ -0.97
TMEM39A-209ENST00000486235 CEP350Q5VT06 3117 aa8.98□□□□□ -0.97
TMEM39A-209ENST00000486235 FYB1O15117 783 aa8.98□□□□□ -0.97
TMEM39A-209ENST00000486235 TEAD4Q15561 434 aa8.98□□□□□ -0.97
TMEM39A-209ENST00000486235 RAB44Q7Z6P3 723 aaPredicted RBP8.98□□□□□ -0.97
TMEM39A-209ENST00000486235 SMARCC1Q92922 1105 aaPredicted RBP8.98□□□□□ -0.97
TMEM39A-209ENST00000486235 COG6Q9Y2V7 657 aa8.98□□□□□ -0.97
TMEM39A-209ENST00000486235 TONSLQ96HA7 1378 aa8.98□□□□□ -0.97
TMEM39A-209ENST00000486235 M0R082 166 aa8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 EML1O00423 815 aa8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 HMGB2P26583 209 aaKnown RBP8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 PRRT3Q5FWE3 981 aa8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 ZMYM1Q5SVZ6 1142 aa8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 LINC00116Q8NCU8 138 aa8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 ZNF417Q8TAU3 575 aa8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 PIGBQ92521 554 aa8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 ZNF587Q96SQ5 575 aaPredicted RBP8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 ALG2Q9H553 416 aa8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 INSRP06213 1382 aa8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 TOGARAM1Q9Y4F4 1720 aa8.97□□□□□ -0.97
TMEM39A-209ENST00000486235 TAF1LQ8IZX4 1826 aa8.96□□□□□ -0.97
TMEM39A-209ENST00000486235 LOC102724428A0A0B4J2F2 783 aa8.96□□□□□ -0.98
TMEM39A-209ENST00000486235 SSFA2P28290 1259 aa8.96□□□□□ -0.98
TMEM39A-209ENST00000486235 EPHA4P54764 986 aa8.96□□□□□ -0.98
TMEM39A-209ENST00000486235 SIK1P57059 783 aa8.96□□□□□ -0.98
TMEM39A-209ENST00000486235 C7orf43Q8WVR3 580 aa8.96□□□□□ -0.98
TMEM39A-209ENST00000486235 STARD13Q9Y3M8 1113 aa8.96□□□□□ -0.98
TMEM39A-209ENST00000486235 FLT4P35916 1363 aa8.96□□□□□ -0.98
TMEM39A-209ENST00000486235 NSD3Q9BZ95 1437 aa8.96□□□□□ -0.98
TMEM39A-209ENST00000486235 SERTM1A2A2V5 107 aa8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 SPDYE3A6NKU9 549 aa8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 PPM1GO15355 546 aaPredicted RBP8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 SIN3BO75182 1162 aa8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 MMP10P09238 476 aa8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 ITPK1Q13572 414 aa8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 RHPN1Q8TCX5 695 aa8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 MDFIQ99750 246 aa8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 PODXL2Q9NZ53 605 aa8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 BCS1LQ9Y276 419 aa8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 HCN4Q9Y3Q4 1203 aa8.95□□□□□ -0.98
TMEM39A-209ENST00000486235 UBR3Q6ZT12 1888 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 USP17L5A8MUK1 530 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 ALBP02768 609 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 SPEM2Q0P670 501 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 RSPO4Q2I0M5 234 aaPredicted RBP8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 TPCN2Q8NHX9 752 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 POM121Q96HA1 1249 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 HSH2DQ96JZ2 352 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 TPSG1Q9NRR2 321 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 TMOD3Q9NYL9 352 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 ASAP1Q9ULH1 1129 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 PXDNLA1KZ92 1463 aa8.94□□□□□ -0.98
TMEM39A-209ENST00000486235 A0A0G2JLW4 131 aa8.93□□□□□ -0.98
TMEM39A-209ENST00000486235 ADARB2-AS1A8MUL3 147 aa8.93□□□□□ -0.98
TMEM39A-209ENST00000486235 LZTS3O60299 673 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-209ENST00000486235 COL9A3Q14050 684 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-209ENST00000486235 ARHGAP27Q6ZUM4 889 aa8.93□□□□□ -0.98
TMEM39A-209ENST00000486235 CEP63Q96MT8 703 aa8.93□□□□□ -0.98
TMEM39A-209ENST00000486235 KRTAP4-8Q9BYQ9 185 aa8.93□□□□□ -0.98
TMEM39A-209ENST00000486235 NMRK2Q9NPI5 230 aa8.93□□□□□ -0.98
TMEM39A-209ENST00000486235 KIAA1024Q9UPX6 916 aa8.93□□□□□ -0.98
TMEM39A-209ENST00000486235 SPG7Q9UQ90 795 aa8.93□□□□□ -0.98
TMEM39A-209ENST00000486235 ITGB4P16144 1822 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms