RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 RHOVQ96L33 236 aa9.69□□□□□ -0.86
RTN4-214ENST00000486085 MRPL18Q9H0U6 180 aaKnown RBP9.69□□□□□ -0.86
RTN4-214ENST00000486085 ACBD3Q9H3P7 528 aa9.69□□□□□ -0.86
RTN4-214ENST00000486085 CCSER2Q9H7U1 834 aa9.69□□□□□ -0.86
RTN4-214ENST00000486085 SELPP16109 830 aa9.68□□□□□ -0.86
RTN4-214ENST00000486085 EIF4A3P38919 411 aaKnown RBP9.68□□□□□ -0.86
RTN4-214ENST00000486085 LMNB2Q03252 620 aa9.68□□□□□ -0.86
RTN4-214ENST00000486085 SEPT6Q14141 434 aa9.68□□□□□ -0.86
RTN4-214ENST00000486085 ACSBG1Q96GR2 724 aa9.68□□□□□ -0.86
RTN4-214ENST00000486085 RUSC1Q9BVN2 902 aa9.68□□□□□ -0.86
RTN4-214ENST00000486085 MIR1-1HGQ9H1L0 117 aa9.68□□□□□ -0.86
RTN4-214ENST00000486085 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
RTN4-214ENST00000486085 ADAMTS1Q9UHI8 967 aa9.68□□□□□ -0.86
RTN4-214ENST00000486085 USP21Q9UK80 565 aa9.68□□□□□ -0.86
RTN4-214ENST00000486085 TRIM37O94972 964 aa9.67□□□□□ -0.86
RTN4-214ENST00000486085 APBA3O96018 575 aa9.67□□□□□ -0.86
RTN4-214ENST00000486085 SNAP47Q5SQN1 464 aa9.67□□□□□ -0.86
RTN4-214ENST00000486085 KIAA1211Q6ZU35 1233 aa9.67□□□□□ -0.86
RTN4-214ENST00000486085 GPBAR1Q8TDU6 330 aa9.67□□□□□ -0.86
RTN4-214ENST00000486085 WDR89Q96FK6 387 aaPredicted RBP9.67□□□□□ -0.86
RTN4-214ENST00000486085 RAD18Q9NS91 495 aa9.67□□□□□ -0.86
RTN4-214ENST00000486085 ZNF862O60290 1169 aa9.66□□□□□ -0.86
RTN4-214ENST00000486085 PTPN11Q06124 597 aaPredicted RBP9.66□□□□□ -0.86
RTN4-214ENST00000486085 EXOSC6Q5RKV6 272 aaKnown RBP9.66□□□□□ -0.86
RTN4-214ENST00000486085 FBXL19Q6PCT2 694 aa9.66□□□□□ -0.86
RTN4-214ENST00000486085 TRIM42Q8IWZ5 723 aa9.66□□□□□ -0.86
RTN4-214ENST00000486085 AGGF1Q8N302 714 aaeCLIP9.66□□□□□ -0.86
RTN4-214ENST00000486085 GOLM1Q8NBJ4 401 aa9.66□□□□□ -0.86
RTN4-214ENST00000486085 ZNF296Q8WUU4 475 aaPredicted RBP9.66□□□□□ -0.86
RTN4-214ENST00000486085 SPON2Q9BUD6 331 aa9.66□□□□□ -0.86
RTN4-214ENST00000486085 KRT82Q9NSB4 513 aa9.66□□□□□ -0.86
RTN4-214ENST00000486085 ALX3O95076 343 aa9.65□□□□□ -0.86
RTN4-214ENST00000486085 HP1BP3Q5SSJ5 553 aaPredicted RBP9.65□□□□□ -0.86
RTN4-214ENST00000486085 BNC2Q6ZN30 1099 aaPredicted RBP9.65□□□□□ -0.86
RTN4-214ENST00000486085 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.65□□□□□ -0.86
RTN4-214ENST00000486085 LENG1Q96BZ8 264 aaPredicted RBP9.65□□□□□ -0.86
RTN4-214ENST00000486085 NACC1Q96RE7 527 aa9.65□□□□□ -0.86
RTN4-214ENST00000486085 C9orf172C9J069 976 aa9.64□□□□□ -0.87
RTN4-214ENST00000486085 F8W735 103 aaPredicted RBP9.64□□□□□ -0.87
RTN4-214ENST00000486085 AOC2O75106 756 aa9.64□□□□□ -0.87
RTN4-214ENST00000486085 GARTP22102 1010 aa9.64□□□□□ -0.87
RTN4-214ENST00000486085 TNNI2P48788 182 aa9.64□□□□□ -0.87
RTN4-214ENST00000486085 KIAA0825Q8IV33 1275 aa9.64□□□□□ -0.87
RTN4-214ENST00000486085 GAL3ST3Q96A11 431 aa9.64□□□□□ -0.87
RTN4-214ENST00000486085 PCDHA4Q9UN74 947 aa9.64□□□□□ -0.87
RTN4-214ENST00000486085 SUPT16HQ9Y5B9 1047 aaKnown RBP9.64□□□□□ -0.87
RTN4-214ENST00000486085 MEGF11A6BM72 1044 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 RNF225M0QZC1 329 aaPredicted RBP9.63□□□□□ -0.87
RTN4-214ENST00000486085 F13A1P00488 732 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 HNRNPUQ00839 825 aaKnown RBP eCLIP9.63□□□□□ -0.873e-6■□□□□ 10
RTN4-214ENST00000486085 AKAP4Q5JQC9 854 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 NUTM2GQ5VZR2 741 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 SCARA3Q6AZY7 606 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 TMEM130Q8N3G9 435 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 WDR18Q9BV38 432 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 TMPRSS13Q9BYE2 586 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 RNF208Q9H0X6 261 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 AKTIPQ9H8T0 292 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 CAPN10Q9HC96 672 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 CACNA2D2Q9NY47 1150 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 INPP5FQ9Y2H2 1132 aa9.63□□□□□ -0.87
RTN4-214ENST00000486085 SLFN14P0C7P3 912 aa9.62□□□□□ -0.87
RTN4-214ENST00000486085 PAK2Q13177 524 aa9.62□□□□□ -0.87
RTN4-214ENST00000486085 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.62□□□□□ -0.87
RTN4-214ENST00000486085 CCDC84Q86UT8 332 aaPredicted RBP9.62□□□□□ -0.87
RTN4-214ENST00000486085 ALYREFQ86V81 257 aaKnown RBP9.62□□□□□ -0.87
RTN4-214ENST00000486085 EAF1Q96JC9 268 aaPredicted RBP9.62□□□□□ -0.87
RTN4-214ENST00000486085 CCDC180Q9P1Z9 1646 aa9.61□□□□□ -0.87
RTN4-214ENST00000486085 TLR3O15455 904 aaKnown RBP9.61□□□□□ -0.87
RTN4-214ENST00000486085 GREM1O60565 184 aa9.61□□□□□ -0.87
RTN4-214ENST00000486085 ZC3H6P61129 1189 aaKnown RBP9.61□□□□□ -0.87
RTN4-214ENST00000486085 NRG1Q02297 640 aaPredicted RBP9.61□□□□□ -0.87
RTN4-214ENST00000486085 KIF4BQ2VIQ3 1234 aa9.61□□□□□ -0.87
RTN4-214ENST00000486085 DIEXFQ68CQ4 756 aaKnown RBP9.61□□□□□ -0.87
RTN4-214ENST00000486085 C12orf50Q8NA57 414 aaPredicted RBP9.61□□□□□ -0.87
RTN4-214ENST00000486085 GATAD2BQ8WXI9 593 aa9.61□□□□□ -0.87
RTN4-214ENST00000486085 CYP4F12Q9HCS2 524 aa9.61□□□□□ -0.87
RTN4-214ENST00000486085 KCNQ5Q9NR82 932 aa9.61□□□□□ -0.87
RTN4-214ENST00000486085 KRBA1A5PL33 1030 aa9.6□□□□□ -0.87
RTN4-214ENST00000486085 IREB2P48200 963 aaKnown RBP9.6□□□□□ -0.87
RTN4-214ENST00000486085 CDK8P49336 464 aa9.6□□□□□ -0.87
RTN4-214ENST00000486085 FAM196AQ6ZSG2 479 aa9.6□□□□□ -0.87
RTN4-214ENST00000486085 FBXO27Q8NI29 283 aa9.6□□□□□ -0.87
RTN4-214ENST00000486085 WFDC12Q8WWY7 111 aa9.6□□□□□ -0.87
RTN4-214ENST00000486085 UBP1Q9NZI7 540 aa9.6□□□□□ -0.87
RTN4-214ENST00000486085 CSADQ9Y600 493 aa9.6□□□□□ -0.87
RTN4-214ENST00000486085 FAM221AA4D161 298 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 DCDC2CA8MYV0 355 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 CILPO75339 1184 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 BPNT1O95861 308 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 DRD2P14416 443 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 GLB1P16278 677 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 NOS3P29474 1203 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 INPP5AQ14642 412 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 NAALADL2Q58DX5 795 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 FDX2Q6P4F2 183 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 SMG8Q8ND04 991 aaKnown RBP9.59□□□□□ -0.87
RTN4-214ENST00000486085 DCAF5Q96JK2 942 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 NT5C1AQ9BXI3 368 aa9.59□□□□□ -0.87
RTN4-214ENST00000486085 PPP1R9AQ9ULJ8 1098 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms