RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	OIP5	O43482	229 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	BPNT1	O95861	308 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	SLURP2	P0DP57	97 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	IMPDH2	P12268	514 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	ETFB	P38117	255 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	KRT76	Q01546	638 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	RPL6	Q02878	288 aa	Known RBP	6.18	□□□□□ -1.42
FN1-222	ENST00000485567	HGSNAT	Q68CP4	663 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	MSL1	Q68DK7	614 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	ZNF787	Q6DD87	383 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	CHSY3	Q70JA7	882 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	WFDC8	Q8IUA0	241 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	MAP4K3	Q8IVH8	894 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	KLHL23	Q8NBE8	558 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	GALNT6	Q8NCL4	622 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	ZNF417	Q8TAU3	575 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	PMFBP1	Q8TBY8	1022 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	MKL1	Q969V6	931 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	SHD	Q96IW2	340 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	ZNF587	Q96SQ5	575 aa	Predicted RBP	6.18	□□□□□ -1.42
FN1-222	ENST00000485567	NRSN2	Q9GZP1	204 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	OSBPL2	Q9H1P3	480 aa		6.18	□□□□□ -1.42
FN1-222	ENST00000485567	HNRNPU	Q00839	825 aa	Known RBP eCLIP	6.17	□□□□□ -1.42
FN1-222	ENST00000485567	PTPN11	Q06124	597 aa	Predicted RBP	6.17	□□□□□ -1.42
FN1-222	ENST00000485567	POU4F3	Q15319	338 aa		6.17	□□□□□ -1.42
FN1-222	ENST00000485567	FAM177A1	Q8N128	213 aa	Predicted RBP	6.17	□□□□□ -1.42
FN1-222	ENST00000485567	OR6P1	Q8NGX9	317 aa		6.17	□□□□□ -1.42
FN1-222	ENST00000485567	CORO1B	Q9BR76	489 aa		6.17	□□□□□ -1.42
FN1-222	ENST00000485567	EHMT1	Q9H9B1	1298 aa		6.17	□□□□□ -1.42
FN1-222	ENST00000485567	BRMS1	Q9HCU9	246 aa		6.17	□□□□□ -1.42
FN1-222	ENST00000485567	PRKAG3	Q9UGI9	489 aa		6.17	□□□□□ -1.42
FN1-222	ENST00000485567	SNCAIP	Q9Y6H5	919 aa		6.17	□□□□□ -1.42
FN1-222	ENST00000485567	TM4SF5	O14894	197 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	KLF4	O43474	513 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	ATE1	O95260	518 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	BCR	P11274	1271 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	CDC25B	P30305	580 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	MCM4	P33991	863 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	GIPR	P48546	466 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	EIF6	P56537	245 aa	Known RBP	6.16	□□□□□ -1.42
FN1-222	ENST00000485567	SERINC3	Q13530	473 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	SUZ12	Q15022	739 aa	Known RBP	6.16	□□□□□ -1.42
FN1-222	ENST00000485567	TNNI3K	Q59H18	835 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	MAP1S	Q66K74	1059 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-222	ENST00000485567	GIMAP6	Q6P9H5	292 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	RBBP8NL	Q8NC74	664 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-222	ENST00000485567	SLC7A3	Q8WY07	619 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	KCNB2	Q92953	911 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	CRBN	Q96SW2	442 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	ZSWIM4	Q9H7M6	989 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	SIRPG	Q9P1W8	387 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	TACC3	Q9Y6A5	838 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	MRVI1	Q9Y6F6	885 aa		6.16	□□□□□ -1.42
FN1-222	ENST00000485567	GFRA2	O00451	464 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	SMARCA5	O60264	1052 aa	Predicted RBP	6.15	□□□□□ -1.42
FN1-222	ENST00000485567	MAOB	P27338	520 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	COL9A3	Q14050	684 aa	Predicted RBP	6.15	□□□□□ -1.42
FN1-222	ENST00000485567	NFE2L2	Q16236	605 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	6.15	□□□□□ -1.42
FN1-222	ENST00000485567	MPRIP	Q6WCQ1	1025 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	ANKS3	Q6ZW76	656 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	LRP10	Q7Z4F1	713 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	DTWD1	Q8N5C7	304 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	DCAF11	Q8TEB1	546 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	KLHDC7B	Q96G42	594 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	FERD3L	Q96RJ6	166 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	ZNRF3	Q9ULT6	936 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	PPT2	Q9UMR5	302 aa		6.15	□□□□□ -1.42
FN1-222	ENST00000485567	SYNGAP1	Q96PV0	1343 aa		6.15	□□□□□ -1.43
FN1-222	ENST00000485567	PRR36	Q9H6K5	1346 aa		6.15	□□□□□ -1.43
FN1-222	ENST00000485567	TLDC2	A0PJX2	215 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	NID1	P14543	1247 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	CLC	Q05315	142 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	RAB33A	Q14088	237 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	SETDB1	Q15047	1291 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	TXNDC11	Q6PKC3	985 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	C8orf86	Q6ZUL3	223 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	GPBAR1	Q8TDU6	330 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	ANAPC16	Q96DE5	110 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	PIF1	Q9H611	641 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	CCDC86	Q9H6F5	360 aa	Known RBP	6.14	□□□□□ -1.43
FN1-222	ENST00000485567	PCDHA4	Q9UN74	947 aa		6.14	□□□□□ -1.43
FN1-222	ENST00000485567	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	6.14	□□□□□ -1.43
FN1-222	ENST00000485567	SHISA8	B8ZZ34	492 aa		6.13	□□□□□ -1.43
FN1-222	ENST00000485567	ZNF862	O60290	1169 aa		6.13	□□□□□ -1.43
FN1-222	ENST00000485567	CELA2B	P08218	269 aa	Predicted RBP	6.13	□□□□□ -1.43
FN1-222	ENST00000485567	KIF4B	Q2VIQ3	1234 aa		6.13	□□□□□ -1.43
FN1-222	ENST00000485567	LRRFIP1	Q32MZ4	808 aa	Known RBP	6.13	□□□□□ -1.43
FN1-222	ENST00000485567	ZNF746	Q6NUN9	644 aa	Predicted RBP	6.13	□□□□□ -1.43
FN1-222	ENST00000485567	CCDC81	Q6ZN84	652 aa		6.13	□□□□□ -1.43
FN1-222	ENST00000485567	GK5	Q6ZS86	529 aa		6.13	□□□□□ -1.43
FN1-222	ENST00000485567	HDX	Q7Z353	690 aa		6.13	□□□□□ -1.43
FN1-222	ENST00000485567	ZC3H12C	Q9C0D7	883 aa	Known RBP	6.13	□□□□□ -1.43
FN1-222	ENST00000485567	CDK11A	Q9UQ88	783 aa	Predicted RBP	6.13	□□□□□ -1.43
FN1-222	ENST00000485567	TMA7	Q9Y2S6	64 aa	Known RBP	6.13	□□□□□ -1.43
FN1-222	ENST00000485567	R3HCC1	Q9Y3T6	440 aa	Known RBP	6.13	□□□□□ -1.43
FN1-222	ENST00000485567	PCDHB14	Q9Y5E9	798 aa		6.13	□□□□□ -1.43
FN1-222	ENST00000485567		K7ELQ4	463 aa	Predicted RBP	6.12	□□□□□ -1.43
FN1-222	ENST00000485567	U2SURP	O15042	1029 aa	Known RBP	6.12	□□□□□ -1.43
FN1-222	ENST00000485567	SMAD7	O15105	426 aa	Known RBP	6.12	□□□□□ -1.43

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