RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ZBTB22O15209 634 aa31.87■■■□□ 2.69
HLA-F-227ENST00000485513 GTF2A2P52657 109 aa31.87■■■□□ 2.69
HLA-F-227ENST00000485513 TIMM10P62072 90 aa31.87■■■□□ 2.69
HLA-F-227ENST00000485513 DCAF15Q66K64 600 aa31.87■■■□□ 2.69
HLA-F-227ENST00000485513 CDC42EP5Q6NZY7 148 aa31.87■■■□□ 2.69
HLA-F-227ENST00000485513 FAM151AQ8WW52 585 aa31.87■■■□□ 2.69
HLA-F-227ENST00000485513 SPDYE5A6NIY4 337 aa31.86■■■□□ 2.69
HLA-F-227ENST00000485513 BRI3BPQ8WY22 251 aa31.86■■■□□ 2.69
HLA-F-227ENST00000485513 SNCAIPQ9Y6H5 919 aa31.86■■■□□ 2.69
HLA-F-227ENST00000485513 CCL15-CCL14A0A0B4J2E2 113 aa31.85■■■□□ 2.69
HLA-F-227ENST00000485513 CCL15Q16663 113 aa31.85■■■□□ 2.69
HLA-F-227ENST00000485513 ZGPATQ8N5A5 531 aaKnown RBP31.85■■■□□ 2.69
HLA-F-227ENST00000485513 CLUAP1Q96AJ1 413 aa31.85■■■□□ 2.69
HLA-F-227ENST00000485513 AKAP2Q9Y2D5 859 aa31.85■■■□□ 2.69
HLA-F-227ENST00000485513 GNAI2P04899 355 aa31.84■■■□□ 2.69
HLA-F-227ENST00000485513 TFCP2Q12800 502 aa31.84■■■□□ 2.69
HLA-F-227ENST00000485513 ERO1BQ86YB8 467 aa31.84■■■□□ 2.69
HLA-F-227ENST00000485513 ZKSCAN4Q969J2 545 aaPredicted RBP31.84■■■□□ 2.69
HLA-F-227ENST00000485513 ERO1AQ96HE7 468 aa31.84■■■□□ 2.69
HLA-F-227ENST00000485513 TRIM17Q9Y577 477 aa31.84■■■□□ 2.69
HLA-F-227ENST00000485513 AK9Q5TCS8 1911 aa31.84■■■□□ 2.69
HLA-F-227ENST00000485513 A0A1B0GUL7 405 aa31.83■■■□□ 2.69
HLA-F-227ENST00000485513 TCP10Q12799 353 aa31.83■■■□□ 2.69
HLA-F-227ENST00000485513 RASGRF1Q13972 1273 aa31.83■■■□□ 2.69
HLA-F-227ENST00000485513 OTOP1Q7RTM1 612 aa31.83■■■□□ 2.69
HLA-F-227ENST00000485513 ZNF341Q9BYN7 854 aa31.83■■■□□ 2.69
HLA-F-227ENST00000485513 USP40Q9NVE5 1235 aa31.83■■■□□ 2.69
HLA-F-227ENST00000485513 NFIAQ12857 509 aa31.82■■■□□ 2.68
HLA-F-227ENST00000485513 MIGA2Q7L4E1 593 aa31.82■■■□□ 2.68
HLA-F-227ENST00000485513 XAGE2Q96GT9 111 aa31.82■■■□□ 2.68
HLA-F-227ENST00000485513 MYH2Q9UKX2 1941 aa31.82■■■□□ 2.68
HLA-F-227ENST00000485513 TNRC18O15417 2968 aaPredicted RBP31.81■■■□□ 2.68
HLA-F-227ENST00000485513 PDS5AQ29RF7 1337 aaKnown RBP31.81■■■□□ 2.68
HLA-F-227ENST00000485513 CD99L2Q8TCZ2 262 aa31.81■■■□□ 2.68
HLA-F-227ENST00000485513 HNRNPUQ00839 825 aaKnown RBP eCLIP31.8■■■□□ 2.68
HLA-F-227ENST00000485513 SP3Q02447 781 aa31.8■■■□□ 2.68
HLA-F-227ENST00000485513 MVPQ14764 893 aaKnown RBP31.8■■■□□ 2.68
HLA-F-227ENST00000485513 TAF1CQ15572 869 aaPredicted RBP31.8■■■□□ 2.68
HLA-F-227ENST00000485513 MIER1Q8N108 512 aa31.8■■■□□ 2.68
HLA-F-227ENST00000485513 FAM198AQ9UFP1 575 aa31.8■■■□□ 2.68
HLA-F-227ENST00000485513 ZKSCAN2Q63HK3 967 aa31.79■■■□□ 2.68
HLA-F-227ENST00000485513 DZIP1Q86YF9 867 aaKnown RBP31.79■■■□□ 2.68
HLA-F-227ENST00000485513 ABCF2Q9UG63 623 aa31.79■■■□□ 2.68
HLA-F-227ENST00000485513 CETPP11597 493 aa31.78■■■□□ 2.68
HLA-F-227ENST00000485513 INPP5BP32019 993 aa31.78■■■□□ 2.68
HLA-F-227ENST00000485513 PPIL2Q13356 520 aa31.78■■■□□ 2.68
HLA-F-227ENST00000485513 FAM43AQ8N2R8 423 aa31.78■■■□□ 2.68
HLA-F-227ENST00000485513 NEUROD6Q96NK8 337 aa31.78■■■□□ 2.68
HLA-F-227ENST00000485513 ZFYVE28Q9HCC9 887 aa31.78■■■□□ 2.68
HLA-F-227ENST00000485513 PNMA6EA0A0J9YXQ4 647 aa31.77■■■□□ 2.68
HLA-F-227ENST00000485513 IRF6O14896 467 aa31.77■■■□□ 2.68
HLA-F-227ENST00000485513 SNAPC2Q13487 334 aa31.77■■■□□ 2.68
HLA-F-227ENST00000485513 SPTY2D1Q68D10 685 aaPredicted RBP31.77■■■□□ 2.68
HLA-F-227ENST00000485513 TMEM57Q8N5G2 664 aa31.77■■■□□ 2.68
HLA-F-227ENST00000485513 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.77■■■□□ 2.68
HLA-F-227ENST00000485513 GAKO14976 1311 aa31.76■■■□□ 2.68
HLA-F-227ENST00000485513 SLF2Q8IX21 1173 aa31.76■■■□□ 2.67
HLA-F-227ENST00000485513 EFCC1Q9HA90 598 aa31.76■■■□□ 2.67
HLA-F-227ENST00000485513 ZNF112Q9UJU3 913 aa31.76■■■□□ 2.67
HLA-F-227ENST00000485513 PPATQ06203 517 aa31.75■■■□□ 2.67
HLA-F-227ENST00000485513 G3BP1Q13283 466 aaKnown RBP eCLIP31.75■■■□□ 2.67
HLA-F-227ENST00000485513 PDE4DIPQ5VU43 2346 aa31.75■■■□□ 2.67
HLA-F-227ENST00000485513 WDHD1O75717 1129 aaPredicted RBP31.74■■■□□ 2.67
HLA-F-227ENST00000485513 GORABQ5T7V8 394 aa31.74■■■□□ 2.67
HLA-F-227ENST00000485513 ZFPM1Q8IX07 1006 aa31.74■■■□□ 2.67
HLA-F-227ENST00000485513 RGS3P49796 1198 aa31.73■■■□□ 2.67
HLA-F-227ENST00000485513 DIEXFQ68CQ4 756 aaKnown RBP31.73■■■□□ 2.67
HLA-F-227ENST00000485513 FAM163AQ96GL9 167 aaPredicted RBP31.73■■■□□ 2.67
HLA-F-227ENST00000485513 IDI2Q9BXS1 227 aa31.73■■■□□ 2.67
HLA-F-227ENST00000485513 ZCCHC17Q9NP64 241 aaKnown RBP31.73■■■□□ 2.67
HLA-F-227ENST00000485513 PTPN22Q9Y2R2 807 aa31.73■■■□□ 2.67
HLA-F-227ENST00000485513 HTTP42858 3142 aa31.72■■■□□ 2.67
HLA-F-227ENST00000485513 BTBD19C9JJ37 291 aa31.72■■■□□ 2.67
HLA-F-227ENST00000485513 ENTPD3O75355 529 aa31.72■■■□□ 2.67
HLA-F-227ENST00000485513 ERICH6Q7L0X2 663 aa31.72■■■□□ 2.67
HLA-F-227ENST00000485513 HMG20BQ9P0W2 317 aa31.71■■■□□ 2.67
HLA-F-227ENST00000485513 DOCK2Q92608 1830 aa31.7■■■□□ 2.67
HLA-F-227ENST00000485513 BTDP43251 543 aa31.7■■■□□ 2.67
HLA-F-227ENST00000485513 CAP1Q01518 475 aa31.7■■■□□ 2.67
HLA-F-227ENST00000485513 NOL9Q5SY16 702 aaKnown RBP31.7■■■□□ 2.67
HLA-F-227ENST00000485513 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.7■■■□□ 2.67
HLA-F-227ENST00000485513 MROH7-TTC4A0A0A0MT08 1334 aa31.7■■■□□ 2.66
HLA-F-227ENST00000485513 RFX7Q2KHR2 1363 aa31.69■■■□□ 2.66
HLA-F-227ENST00000485513 MECOMQ03112 1051 aa31.69■■■□□ 2.66
HLA-F-227ENST00000485513 ARHGEF6Q15052 776 aa31.69■■■□□ 2.66
HLA-F-227ENST00000485513 SPATA5Q8NB90 893 aa31.69■■■□□ 2.66
HLA-F-227ENST00000485513 TLR2O60603 784 aa31.68■■■□□ 2.66
HLA-F-227ENST00000485513 ARID4AP29374 1257 aaPredicted RBP31.68■■■□□ 2.66
HLA-F-227ENST00000485513 PI16Q6UXB8 463 aa31.68■■■□□ 2.66
HLA-F-227ENST00000485513 ZSCAN29Q8IWY8 852 aaPredicted RBP31.68■■■□□ 2.66
HLA-F-227ENST00000485513 FTSJ3Q8IY81 847 aaKnown RBP31.68■■■□□ 2.66
HLA-F-227ENST00000485513 ATRNL1Q5VV63 1379 aa31.68■■■□□ 2.66
HLA-F-227ENST00000485513 POLA2Q14181 598 aa31.67■■■□□ 2.66
HLA-F-227ENST00000485513 KCNH4Q9UQ05 1017 aa31.67■■■□□ 2.66
HLA-F-227ENST00000485513 DDX4Q9NQI0 724 aaKnown RBP31.66■■■□□ 2.66
HLA-F-227ENST00000485513 GPR75-ASB3A0A0A6YYF3 556 aa31.65■■■□□ 2.66
HLA-F-227ENST00000485513 ATP8B2P98198 1209 aa31.65■■■□□ 2.66
HLA-F-227ENST00000485513 PICALMQ13492 652 aa31.65■■■□□ 2.66
HLA-F-227ENST00000485513 TBC1D9Q6ZT07 1266 aa31.65■■■□□ 2.66
HLA-F-227ENST00000485513 SH3BP5LQ7L8J4 393 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms