RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 PRDX5P30044 214 aa20.43■□□□□ 0.86
TRIM54-203ENST00000485306 CACNB3P54284 484 aa20.43■□□□□ 0.86
TRIM54-203ENST00000485306 OS9Q13438 667 aaPredicted RBP20.43■□□□□ 0.86
TRIM54-203ENST00000485306 SLF2Q8IX21 1173 aa20.43■□□□□ 0.86
TRIM54-203ENST00000485306 ABHD8Q96I13 439 aa20.43■□□□□ 0.86
TRIM54-203ENST00000485306 CLMNQ96JQ2 1002 aa20.43■□□□□ 0.86
TRIM54-203ENST00000485306 PDS5AQ29RF7 1337 aaKnown RBP20.43■□□□□ 0.86
TRIM54-203ENST00000485306 ALDH1A1P00352 501 aa20.42■□□□□ 0.86
TRIM54-203ENST00000485306 ERICH6BQ5W0A0 696 aa20.42■□□□□ 0.86
TRIM54-203ENST00000485306 WNK4Q96J92 1243 aa20.42■□□□□ 0.86
TRIM54-203ENST00000485306 ABCF2Q9UG63 623 aa20.42■□□□□ 0.86
TRIM54-203ENST00000485306 DAGLAQ9Y4D2 1042 aa20.42■□□□□ 0.86
TRIM54-203ENST00000485306 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.42■□□□□ 0.86
TRIM54-203ENST00000485306 MAP3K9P80192 1104 aa20.41■□□□□ 0.86
TRIM54-203ENST00000485306 DGKZQ13574 1117 aa20.41■□□□□ 0.86
TRIM54-203ENST00000485306 RASGRF1Q13972 1273 aa20.41■□□□□ 0.86
TRIM54-203ENST00000485306 DIXDC1Q155Q3 683 aa20.41■□□□□ 0.86
TRIM54-203ENST00000485306 CEP85Q6P2H3 762 aa20.41■□□□□ 0.86
TRIM54-203ENST00000485306 ZBTB40Q9NUA8 1239 aa20.41■□□□□ 0.86
TRIM54-203ENST00000485306 SURF6O75683 361 aaKnown RBP20.4■□□□□ 0.86
TRIM54-203ENST00000485306 TBC1D8O95759 1140 aa20.4■□□□□ 0.86
TRIM54-203ENST00000485306 DZIP1Q86YF9 867 aaKnown RBP20.4■□□□□ 0.86
TRIM54-203ENST00000485306 FAM151AQ8WW52 585 aa20.4■□□□□ 0.86
TRIM54-203ENST00000485306 GPR108Q9NPR9 543 aa20.4■□□□□ 0.86
TRIM54-203ENST00000485306 USP40Q9NVE5 1235 aa20.4■□□□□ 0.86
TRIM54-203ENST00000485306 CSADQ9Y600 493 aa20.4■□□□□ 0.86
TRIM54-203ENST00000485306 DCAF15Q66K64 600 aa20.39■□□□□ 0.85
TRIM54-203ENST00000485306 OTUD7BQ6GQQ9 843 aa20.39■□□□□ 0.85
TRIM54-203ENST00000485306 CDC42EP5Q6NZY7 148 aa20.39■□□□□ 0.85
TRIM54-203ENST00000485306 CDAN1Q8IWY9 1227 aa20.39■□□□□ 0.85
TRIM54-203ENST00000485306 MCOLN1Q9GZU1 580 aa20.39■□□□□ 0.85
TRIM54-203ENST00000485306 NOP58Q9Y2X3 529 aaKnown RBP20.39■□□□□ 0.85
TRIM54-203ENST00000485306 UQCRFS1P1P0C7P4 283 aa20.38■□□□□ 0.85
TRIM54-203ENST00000485306 ERICH6Q7L0X2 663 aa20.38■□□□□ 0.85
TRIM54-203ENST00000485306 SPATA5Q8NB90 893 aa20.38■□□□□ 0.85
TRIM54-203ENST00000485306 EXOC6Q8TAG9 804 aa20.38■□□□□ 0.85
TRIM54-203ENST00000485306 ELP3Q9H9T3 547 aa20.38■□□□□ 0.85
TRIM54-203ENST00000485306 AK9Q5TCS8 1911 aa20.37■□□□□ 0.85
TRIM54-203ENST00000485306 MYH2Q9UKX2 1941 aa20.37■□□□□ 0.85
TRIM54-203ENST00000485306 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
TRIM54-203ENST00000485306 CCDC158Q5M9N0 1113 aa20.37■□□□□ 0.85
TRIM54-203ENST00000485306 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.37■□□□□ 0.85
TRIM54-203ENST00000485306 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.37■□□□□ 0.85
TRIM54-203ENST00000485306 OPTNQ96CV9 577 aa20.37■□□□□ 0.85
TRIM54-203ENST00000485306 CFHR5Q9BXR6 569 aa20.37■□□□□ 0.85
TRIM54-203ENST00000485306 HMG20BQ9P0W2 317 aa20.37■□□□□ 0.85
TRIM54-203ENST00000485306 RPAP1Q9BWH6 1393 aaPredicted RBP20.36■□□□□ 0.85
TRIM54-203ENST00000485306 ARID4AP29374 1257 aaPredicted RBP20.36■□□□□ 0.85
TRIM54-203ENST00000485306 TCP10Q12799 353 aa20.36■□□□□ 0.85
TRIM54-203ENST00000485306 TNNI3KQ59H18 835 aa20.36■□□□□ 0.85
TRIM54-203ENST00000485306 NOM1Q5C9Z4 860 aaKnown RBP20.36■□□□□ 0.85
TRIM54-203ENST00000485306 IFNL1Q8IU54 200 aa20.36■□□□□ 0.85
TRIM54-203ENST00000485306 FAM163AQ96GL9 167 aaPredicted RBP20.36■□□□□ 0.85
TRIM54-203ENST00000485306 FPGT-TNNI3KV9GXZ4 949 aa20.36■□□□□ 0.85
TRIM54-203ENST00000485306 LDHCP07864 332 aa20.35■□□□□ 0.85
TRIM54-203ENST00000485306 GSTO1P78417 241 aa20.35■□□□□ 0.85
TRIM54-203ENST00000485306 VGLL4Q14135 290 aa20.35■□□□□ 0.85
TRIM54-203ENST00000485306 WRNIP1Q96S55 665 aa20.35■□□□□ 0.85
TRIM54-203ENST00000485306 ZNF341Q9BYN7 854 aa20.35■□□□□ 0.85
TRIM54-203ENST00000485306 GAKO14976 1311 aa20.34■□□□□ 0.85
TRIM54-203ENST00000485306 CCDC85CA6NKD9 419 aa20.34■□□□□ 0.85
TRIM54-203ENST00000485306 GPR25O00155 361 aa20.34■□□□□ 0.85
TRIM54-203ENST00000485306 TTC39AQ5SRH9 613 aa20.34■□□□□ 0.85
TRIM54-203ENST00000485306 CTU1Q7Z7A3 348 aaKnown RBP20.34■□□□□ 0.85
TRIM54-203ENST00000485306 RPAP2Q8IXW5 612 aaPredicted RBP20.34■□□□□ 0.85
TRIM54-203ENST00000485306 ZNF296Q8WUU4 475 aaPredicted RBP20.34■□□□□ 0.85
TRIM54-203ENST00000485306 OTOFQ9HC10 1997 aa20.34■□□□□ 0.85
TRIM54-203ENST00000485306 GJA5P36382 358 aa20.33■□□□□ 0.85
TRIM54-203ENST00000485306 GTF2A2P52657 109 aa20.33■□□□□ 0.85
TRIM54-203ENST00000485306 MECOMQ03112 1051 aa20.33■□□□□ 0.85
TRIM54-203ENST00000485306 NFIAQ12857 509 aa20.33■□□□□ 0.85
TRIM54-203ENST00000485306 MIGA2Q7L4E1 593 aa20.33■□□□□ 0.85
TRIM54-203ENST00000485306 IDI2Q9BXS1 227 aa20.33■□□□□ 0.85
TRIM54-203ENST00000485306 RAI14Q9P0K7 980 aa20.33■□□□□ 0.85
TRIM54-203ENST00000485306 MROH7-TTC4A0A0A0MT08 1334 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 LAMB1P07942 1786 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 TESPA1A2RU30 521 aaPredicted RBP20.32■□□□□ 0.84
TRIM54-203ENST00000485306 FKTNO75072 461 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 ENTPD3O75355 529 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 MCAMP43121 646 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 ERO1BQ86YB8 467 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 ERC1Q8IUD2 1116 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 OTUD5Q96G74 571 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 LRP2BPQ9P2M1 347 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 FAM198AQ9UFP1 575 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 EXOC6BQ9Y2D4 811 aa20.32■□□□□ 0.84
TRIM54-203ENST00000485306 IGF2BP3O00425 579 aaKnown RBP eCLIP20.31■□□□□ 0.84
TRIM54-203ENST00000485306 MAP4K4O95819 1239 aaPredicted RBP20.31■□□□□ 0.84
TRIM54-203ENST00000485306 BTDP43251 543 aa20.31■□□□□ 0.84
TRIM54-203ENST00000485306 PKN2Q16513 984 aaKnown RBP20.31■□□□□ 0.84
TRIM54-203ENST00000485306 HSP90AB4PQ58FF6 505 aa20.31■□□□□ 0.84
TRIM54-203ENST00000485306 TBC1D9Q6ZT07 1266 aa20.31■□□□□ 0.84
TRIM54-203ENST00000485306 ZKSCAN4Q969J2 545 aaPredicted RBP20.31■□□□□ 0.84
TRIM54-203ENST00000485306 DBNDD2Q9BQY9 259 aa20.31■□□□□ 0.84
TRIM54-203ENST00000485306 GPR75-ASB3A0A0A6YYF3 556 aa20.3■□□□□ 0.84
TRIM54-203ENST00000485306 SPDYE5A6NIY4 337 aa20.3■□□□□ 0.84
TRIM54-203ENST00000485306 HMMRO75330 724 aa20.3■□□□□ 0.84
TRIM54-203ENST00000485306 RGS3P49796 1198 aa20.3■□□□□ 0.84
TRIM54-203ENST00000485306 PI16Q6UXB8 463 aa20.3■□□□□ 0.84
TRIM54-203ENST00000485306 ZSCAN29Q8IWY8 852 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms