RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 SIRT2Q8IXJ6 389 aa9.57□□□□□ -0.88
MACF1-220ENST00000485063 PRMT6Q96LA8 375 aaPredicted RBP9.57□□□□□ -0.88
MACF1-220ENST00000485063 DBNDD2Q9BQY9 259 aa9.57□□□□□ -0.88
MACF1-220ENST00000485063 LRRCC1Q9C099 1032 aa9.57□□□□□ -0.88
MACF1-220ENST00000485063 CCDC8Q9H0W5 538 aaPredicted RBP9.57□□□□□ -0.88
MACF1-220ENST00000485063 VEZTQ9HBM0 779 aa9.57□□□□□ -0.88
MACF1-220ENST00000485063 IL1RAPL2Q9NP60 686 aa9.57□□□□□ -0.88
MACF1-220ENST00000485063 SUPT16HQ9Y5B9 1047 aaKnown RBP9.57□□□□□ -0.88
MACF1-220ENST00000485063 PPP2R3BQ9Y5P8 575 aa9.57□□□□□ -0.88
MACF1-220ENST00000485063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.57□□□□□ -0.88
MACF1-220ENST00000485063 COL1A1P02452 1464 aaPredicted RBP9.57□□□□□ -0.88
MACF1-220ENST00000485063 ASTN2O75129 1339 aaPredicted RBP9.56□□□□□ -0.88
MACF1-220ENST00000485063 CLRN2A0PK11 232 aa9.56□□□□□ -0.88
MACF1-220ENST00000485063 PRDX5P30044 214 aa9.56□□□□□ -0.88
MACF1-220ENST00000485063 ECE1P42892 770 aa9.56□□□□□ -0.88
MACF1-220ENST00000485063 GSTO1P78417 241 aa9.56□□□□□ -0.88
MACF1-220ENST00000485063 FMR1Q06787 632 aaKnown RBP eCLIP9.56□□□□□ -0.885e-8■■■□□ 16
MACF1-220ENST00000485063 EAF2Q96CJ1 260 aaPredicted RBP9.56□□□□□ -0.88
MACF1-220ENST00000485063 KLRG1Q96E93 195 aa9.56□□□□□ -0.88
MACF1-220ENST00000485063 CDCA5Q96FF9 252 aa9.56□□□□□ -0.88
MACF1-220ENST00000485063 ZBED3Q96IU2 234 aaPredicted RBP9.56□□□□□ -0.88
MACF1-220ENST00000485063 ZNF512BQ96KM6 892 aaPredicted RBP9.56□□□□□ -0.88
MACF1-220ENST00000485063 ZDHHC15Q96MV8 337 aa9.56□□□□□ -0.88
MACF1-220ENST00000485063 TDRD3Q9H7E2 651 aaKnown RBP9.56□□□□□ -0.88
MACF1-220ENST00000485063 GBA2Q9HCG7 927 aaPredicted RBP9.56□□□□□ -0.88
MACF1-220ENST00000485063 HMG20BQ9P0W2 317 aa9.56□□□□□ -0.88
MACF1-220ENST00000485063 LRP2BPQ9P2M1 347 aa9.56□□□□□ -0.88
MACF1-220ENST00000485063 IGSF3O75054 1194 aa9.55□□□□□ -0.88
MACF1-220ENST00000485063 LDHCP07864 332 aa9.55□□□□□ -0.88
MACF1-220ENST00000485063 MCAMP43121 646 aa9.55□□□□□ -0.88
MACF1-220ENST00000485063 FKBP1BP68106 108 aa9.55□□□□□ -0.88
MACF1-220ENST00000485063 TTLL12Q14166 644 aaPredicted RBP9.55□□□□□ -0.88
MACF1-220ENST00000485063 GRIK5Q16478 980 aa9.55□□□□□ -0.88
MACF1-220ENST00000485063 CST9Q5W186 159 aa9.55□□□□□ -0.88
MACF1-220ENST00000485063 NOL10Q9BSC4 688 aaKnown RBP9.55□□□□□ -0.88
MACF1-220ENST00000485063 DEFB129Q9H1M3 183 aa9.55□□□□□ -0.88
MACF1-220ENST00000485063 RAI14Q9P0K7 980 aa9.55□□□□□ -0.88
MACF1-220ENST00000485063 ZNF70Q9UC06 446 aaPredicted RBP9.55□□□□□ -0.88
MACF1-220ENST00000485063 MKRN1Q9UHC7 482 aaKnown RBP9.55□□□□□ -0.88
MACF1-220ENST00000485063 DBNLQ9UJU6 430 aaKnown RBP9.55□□□□□ -0.88
MACF1-220ENST00000485063 TLL2Q9Y6L7 1015 aa9.55□□□□□ -0.88
MACF1-220ENST00000485063 AK9Q5TCS8 1911 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 AKAP11Q9UKA4 1901 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 CNTNAP1P78357 1384 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 RASSF10A6NK89 507 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 PLCG2P16885 1265 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 SUPT20HL1Q3ZLR7 823 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 DNAJC5GQ8N7S2 189 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 GPATCH3Q96I76 525 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 HHIPL1Q96JK4 782 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 DCTPP1Q9H773 170 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 SCAF8Q9UPN6 1271 aaKnown RBP9.54□□□□□ -0.88
MACF1-220ENST00000485063 PCDHAC2Q9Y5I4 1007 aa9.54□□□□□ -0.88
MACF1-220ENST00000485063 MAST2Q6P0Q8 1798 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 PAPPA2Q9BXP8 1791 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 TCP10L2B9ZVM9 353 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 PPP1R12BO60237 982 aaPredicted RBP9.53□□□□□ -0.88
MACF1-220ENST00000485063 HUNKP57058 714 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 MECOMQ03112 1051 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 GRM1Q13255 1194 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 RASA3Q14644 834 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 TTF1Q15361 905 aaPredicted RBP9.53□□□□□ -0.88
MACF1-220ENST00000485063 DIXDC1Q155Q3 683 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 PI16Q6UXB8 463 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 DLK2Q6UY11 383 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 ARMC9Q7Z3E5 817 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 SAPCD2Q86UD0 394 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 HOOK2Q96ED9 719 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 SNRKQ9NRH2 765 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 USP40Q9NVE5 1235 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 TLR7Q9NYK1 1049 aaKnown RBP9.53□□□□□ -0.88
MACF1-220ENST00000485063 DAGLAQ9Y4D2 1042 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 PCDHB15Q9Y5E8 787 aa9.53□□□□□ -0.88
MACF1-220ENST00000485063 BAG3O95817 575 aa9.52□□□□□ -0.89
MACF1-220ENST00000485063 ZAP70P43403 619 aa9.52□□□□□ -0.89
MACF1-220ENST00000485063 IRX5P78411 483 aaPredicted RBP9.52□□□□□ -0.89
MACF1-220ENST00000485063 MAP3K12Q12852 859 aa9.52□□□□□ -0.89
MACF1-220ENST00000485063 FKBP1CQ5VVH2 108 aa9.52□□□□□ -0.89
MACF1-220ENST00000485063 PRAMEF18Q5VWM3 479 aa9.52□□□□□ -0.89
MACF1-220ENST00000485063 NAA16Q6N069 864 aaPredicted RBP9.52□□□□□ -0.89
MACF1-220ENST00000485063 APOBEC3HQ6NTF7 200 aaKnown RBP9.52□□□□□ -0.89
MACF1-220ENST00000485063 TBC1D9Q6ZT07 1266 aa9.52□□□□□ -0.89
MACF1-220ENST00000485063 FAM83AQ86UY5 434 aa9.52□□□□□ -0.89
MACF1-220ENST00000485063 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.52□□□□□ -0.89
MACF1-220ENST00000485063 GCC1Q96CN9 775 aa9.52□□□□□ -0.89
MACF1-220ENST00000485063 RWDD1Q9H446 243 aaPredicted RBP9.52□□□□□ -0.89
MACF1-220ENST00000485063 MYO5AQ9Y4I1 1855 aaKnown RBP9.52□□□□□ -0.89
MACF1-220ENST00000485063 MROH7-TTC4A0A0A0MT08 1334 aa9.52□□□□□ -0.89
MACF1-220ENST00000485063 WDR33Q9C0J8 1336 aaKnown RBP9.52□□□□□ -0.89
MACF1-220ENST00000485063 IDH1O75874 414 aaKnown RBP9.51□□□□□ -0.89
MACF1-220ENST00000485063 MAP4K4O95819 1239 aaPredicted RBP9.51□□□□□ -0.89
MACF1-220ENST00000485063 CYP2E1P05181 493 aaPredicted RBP9.51□□□□□ -0.89
MACF1-220ENST00000485063 BTDP43251 543 aa9.51□□□□□ -0.89
MACF1-220ENST00000485063 VEGFBP49765 207 aa9.51□□□□□ -0.89
MACF1-220ENST00000485063 ZNF157P51786 506 aaPredicted RBP9.51□□□□□ -0.89
MACF1-220ENST00000485063 PRKG1Q13976 671 aa9.51□□□□□ -0.89
MACF1-220ENST00000485063 CYP4F22Q6NT55 531 aa9.51□□□□□ -0.89
MACF1-220ENST00000485063 RGMBQ6NW40 437 aa9.51□□□□□ -0.89
MACF1-220ENST00000485063 TMED8Q6PL24 325 aaPredicted RBP9.51□□□□□ -0.89
MACF1-220ENST00000485063 EXOC6Q8TAG9 804 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms