RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 HOMER2Q9NSB8 354 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 ZFYVE16Q7Z3T8 1539 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 IL17REQ8NFR9 667 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 BEGAINQ9BUH8 593 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 IKBKGQ9Y6K9 419 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 SHTN1A0MZ66 631 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 VWA3AA6NCI4 1184 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 CKAP4Q07065 602 aaKnown RBP18■□□□□ 0.47
PCDH17-202ENST00000484979 CNKSR1Q969H4 720 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 KRT83P78385 493 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 KIF5AQ12840 1032 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 NEK11Q8NG66 645 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 TEKT1Q969V4 418 aa18■□□□□ 0.47
PCDH17-202ENST00000484979 PNMA6EA0A0J9YXQ4 647 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 ECM2O94769 699 aaPredicted RBP17.99■□□□□ 0.47
PCDH17-202ENST00000484979 LMAN1P49257 510 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 SMTNP53814 917 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 MFSD14BQ5SR56 506 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 ZBED4O75132 1171 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 SKILP12757 684 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 CARD10Q9BWT7 1032 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 LOC102724428A0A0B4J2F2 783 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 SLC27A2O14975 620 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 ATP5JP18859 108 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 ZAP70P43403 619 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 SIK1P57059 783 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 C8orf34Q49A92 452 aa17.99■□□□□ 0.47
PCDH17-202ENST00000484979 GTF2IP78347 998 aa17.98■□□□□ 0.47
PCDH17-202ENST00000484979 KRT86O43790 486 aa17.98■□□□□ 0.47
PCDH17-202ENST00000484979 CTSWP56202 376 aa17.98■□□□□ 0.47
PCDH17-202ENST00000484979 ZYXQ15942 572 aaKnown RBP17.98■□□□□ 0.47
PCDH17-202ENST00000484979 DPY19L2Q6NUT2 758 aa17.98■□□□□ 0.47
PCDH17-202ENST00000484979 ZNF174Q15697 407 aa17.98■□□□□ 0.47
PCDH17-202ENST00000484979 DIS3L2Q8IYB7 885 aaKnown RBP17.98■□□□□ 0.47
PCDH17-202ENST00000484979 CPXCR1Q8N123 301 aa17.98■□□□□ 0.47
PCDH17-202ENST00000484979 ATP2B4P23634 1241 aa17.98■□□□□ 0.47
PCDH17-202ENST00000484979 TYRO3Q06418 890 aa17.98■□□□□ 0.47
PCDH17-202ENST00000484979 NSMFQ6X4W1 530 aa17.98■□□□□ 0.47
PCDH17-202ENST00000484979 BCCIPQ9P287 314 aaKnown RBP eCLIP17.98■□□□□ 0.47
PCDH17-202ENST00000484979 BCS1LQ9Y276 419 aa17.98■□□□□ 0.47
PCDH17-202ENST00000484979 ZNF532Q9HCE3 1301 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 CCT6AP40227 531 aaKnown RBP17.97■□□□□ 0.47
PCDH17-202ENST00000484979 STX17P56962 302 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 TAF12Q16514 161 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 MAPKAPK5Q8IW41 473 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 TSNARE1Q96NA8 513 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 TTF2Q9UNY4 1162 aaKnown RBP17.97■□□□□ 0.47
PCDH17-202ENST00000484979 STAMBPO95630 424 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 PTGS1P23219 599 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 CCDC186Q7Z3E2 898 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 SSX2IPQ9Y2D8 614 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 NOP56O00567 594 aaKnown RBP17.97■□□□□ 0.47
PCDH17-202ENST00000484979 PCCAP05165 728 aaPredicted RBP17.97■□□□□ 0.47
PCDH17-202ENST00000484979 TCP10Q12799 353 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 KRT25Q7Z3Z0 450 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 ZBTB38Q8NAP3 1195 aaPredicted RBP17.97■□□□□ 0.47
PCDH17-202ENST00000484979 FAM227BQ96M60 508 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 FNBP1Q96RU3 617 aa17.97■□□□□ 0.47
PCDH17-202ENST00000484979 QTRT2Q9H974 415 aaKnown RBP17.97■□□□□ 0.47
PCDH17-202ENST00000484979 TRAF5O00463 557 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 ARID5AQ03989 594 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 NONOQ15233 471 aaKnown RBP eCLIP17.96■□□□□ 0.47
PCDH17-202ENST00000484979 OTUD7AQ8TE49 926 aaPredicted RBP17.96■□□□□ 0.47
PCDH17-202ENST00000484979 TMX1Q9H3N1 280 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 LUC7L2Q9Y383 392 aaKnown RBP17.96■□□□□ 0.47
PCDH17-202ENST00000484979 STK24Q9Y6E0 443 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 UBE2Q2Q8WVN8 375 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 IFT74Q96LB3 600 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 FRMD4BQ9Y2L6 1034 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 ELP1O95163 1332 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 TUBB4AP04350 444 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 CPA1P15085 419 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 IRX3P78415 501 aaPredicted RBP17.96■□□□□ 0.47
PCDH17-202ENST00000484979 CHURC1Q8WUH1 139 aa17.96■□□□□ 0.47
PCDH17-202ENST00000484979 CCDC175P0C221 793 aa17.96■□□□□ 0.46
PCDH17-202ENST00000484979 TFAP4Q01664 338 aa17.96■□□□□ 0.46
PCDH17-202ENST00000484979 ARHGEF25Q86VW2 580 aa17.96■□□□□ 0.46
PCDH17-202ENST00000484979 ZNF354CQ86Y25 554 aa17.96■□□□□ 0.46
PCDH17-202ENST00000484979 PKD2L1Q9P0L9 805 aa17.96■□□□□ 0.46
PCDH17-202ENST00000484979 PAXBP1Q9Y5B6 917 aa17.96■□□□□ 0.46
PCDH17-202ENST00000484979 YEATS2Q9ULM3 1422 aa17.95■□□□□ 0.46
PCDH17-202ENST00000484979 GPR162Q16538 588 aa17.95■□□□□ 0.46
PCDH17-202ENST00000484979 PLIN2Q99541 437 aa17.95■□□□□ 0.46
PCDH17-202ENST00000484979 CSADQ9Y600 493 aa17.95■□□□□ 0.46
PCDH17-202ENST00000484979 FAM196AQ6ZSG2 479 aa17.95■□□□□ 0.46
PCDH17-202ENST00000484979 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
PCDH17-202ENST00000484979 ARHGEF35A5YM69 484 aa17.95■□□□□ 0.46
PCDH17-202ENST00000484979 TGFBRAP1Q8WUH2 860 aa17.95■□□□□ 0.46
PCDH17-202ENST00000484979 ATP2A1O14983 1001 aa17.94■□□□□ 0.46
PCDH17-202ENST00000484979 FAM160A1Q05DH4 1040 aa17.94■□□□□ 0.46
PCDH17-202ENST00000484979 RGS22Q8NE09 1264 aa17.94■□□□□ 0.46
PCDH17-202ENST00000484979 USP40Q9NVE5 1235 aa17.94■□□□□ 0.46
PCDH17-202ENST00000484979 ARPP21Q9UBL0 812 aaPredicted RBP17.94■□□□□ 0.46
PCDH17-202ENST00000484979 BIRC3Q13489 604 aa17.94■□□□□ 0.46
PCDH17-202ENST00000484979 AKNAD1Q5T1N1 836 aa17.94■□□□□ 0.46
PCDH17-202ENST00000484979 KIF21AQ7Z4S6 1674 aa17.94■□□□□ 0.46
PCDH17-202ENST00000484979 PLCB3Q01970 1234 aa17.94■□□□□ 0.46
PCDH17-202ENST00000484979 ANO1Q5XXA6 986 aa17.94■□□□□ 0.46
PCDH17-202ENST00000484979 TTLL7Q6ZT98 887 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms