RNA–Protein interactions for RNA: ENST00000484958.5

FXR1-219, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-219ENST00000484958 LDLRAD1Q5T700 205 aa9.72□□□□□ -0.85
FXR1-219ENST00000484958 MAP1SQ66K74 1059 aaPredicted RBP9.72□□□□□ -0.85
FXR1-219ENST00000484958 KIAA1211Q6ZU35 1233 aa9.72□□□□□ -0.85
FXR1-219ENST00000484958 ERMP1Q7Z2K6 904 aa9.72□□□□□ -0.85
FXR1-219ENST00000484958 PDZD3Q86UT5 571 aa9.72□□□□□ -0.85
FXR1-219ENST00000484958 WFDC12Q8WWY7 111 aa9.72□□□□□ -0.85
FXR1-219ENST00000484958 TMPRSS13Q9BYE2 586 aa9.72□□□□□ -0.85
FXR1-219ENST00000484958 SART1O43290 800 aaKnown RBP9.71□□□□□ -0.86
FXR1-219ENST00000484958 MBTPS1Q14703 1052 aa9.71□□□□□ -0.86
FXR1-219ENST00000484958 SMG8Q8ND04 991 aaKnown RBP9.71□□□□□ -0.86
FXR1-219ENST00000484958 KRBA1A5PL33 1030 aa9.7□□□□□ -0.86
FXR1-219ENST00000484958 LMNB2Q03252 620 aa9.7□□□□□ -0.86
FXR1-219ENST00000484958 UVSSAQ2YD98 709 aa9.7□□□□□ -0.86
FXR1-219ENST00000484958 PHC3Q8NDX5 983 aa9.7□□□□□ -0.86
FXR1-219ENST00000484958 WISP1O95388 367 aa9.69□□□□□ -0.86
FXR1-219ENST00000484958 GLB1P16278 677 aa9.69□□□□□ -0.86
FXR1-219ENST00000484958 KIF4BQ2VIQ3 1234 aa9.69□□□□□ -0.86
FXR1-219ENST00000484958 USP48Q86UV5 1035 aa9.69□□□□□ -0.86
FXR1-219ENST00000484958 TRIM42Q8IWZ5 723 aa9.69□□□□□ -0.86
FXR1-219ENST00000484958 C12orf50Q8NA57 414 aaPredicted RBP9.69□□□□□ -0.86
FXR1-219ENST00000484958 CCDC86Q9H6F5 360 aaKnown RBP9.69□□□□□ -0.86
FXR1-219ENST00000484958 KBTBD4Q9NVX7 518 aa9.69□□□□□ -0.86
FXR1-219ENST00000484958 C1QTNF9BB2RNN3 333 aa9.68□□□□□ -0.86
FXR1-219ENST00000484958 AOC2O75106 756 aa9.68□□□□□ -0.86
FXR1-219ENST00000484958 GATA4P43694 442 aa9.68□□□□□ -0.86
FXR1-219ENST00000484958 IREB2P48200 963 aaKnown RBP9.68□□□□□ -0.86
FXR1-219ENST00000484958 Q6ZS46 218 aa9.68□□□□□ -0.86
FXR1-219ENST00000484958 ZNF654Q8IZM8 581 aa9.68□□□□□ -0.86
FXR1-219ENST00000484958 YIPF2Q9BWQ6 316 aa9.68□□□□□ -0.86
FXR1-219ENST00000484958 ZC3H12CQ9C0D7 883 aaKnown RBP9.68□□□□□ -0.86
FXR1-219ENST00000484958 ROBO2Q9HCK4 1378 aa9.67□□□□□ -0.86
FXR1-219ENST00000484958 CAMK2GQ13555 558 aaPredicted RBP9.67□□□□□ -0.86
FXR1-219ENST00000484958 CD163Q86VB7 1156 aa9.67□□□□□ -0.86
FXR1-219ENST00000484958 STK35Q8TDR2 534 aa9.67□□□□□ -0.86
FXR1-219ENST00000484958 CACNA2D2Q9NY47 1150 aa9.67□□□□□ -0.86
FXR1-219ENST00000484958 HIF3AQ9Y2N7 669 aa9.67□□□□□ -0.86
FXR1-219ENST00000484958 GAS2O43903 313 aaKnown RBP9.66□□□□□ -0.86
FXR1-219ENST00000484958 BPNT1O95861 308 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 NOS3P29474 1203 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 EIF4A3P38919 411 aaKnown RBP9.66□□□□□ -0.86
FXR1-219ENST00000484958 HDLBPQ00341 1268 aaKnown RBP9.66□□□□□ -0.86
FXR1-219ENST00000484958 SOX4Q06945 474 aaPredicted RBP9.66□□□□□ -0.86
FXR1-219ENST00000484958 SNAP47Q5SQN1 464 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 HDXQ7Z353 690 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 NT5DC4Q86YG4 428 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 GRIN3AQ8TCU5 1115 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 GPBAR1Q8TDU6 330 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 WDR18Q9BV38 432 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 ATXN3LQ9H3M9 355 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 PCDHA4Q9UN74 947 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 SUPT16HQ9Y5B9 1047 aaKnown RBP9.66□□□□□ -0.86
FXR1-219ENST00000484958 SNCAIPQ9Y6H5 919 aa9.66□□□□□ -0.86
FXR1-219ENST00000484958 MINDY4BA8MYZ0 360 aa9.65□□□□□ -0.86
FXR1-219ENST00000484958 LIG1P18858 919 aa9.65□□□□□ -0.86
FXR1-219ENST00000484958 TFE3P19532 575 aaPredicted RBP9.65□□□□□ -0.86
FXR1-219ENST00000484958 CHRNA4P43681 627 aa9.65□□□□□ -0.86
FXR1-219ENST00000484958 ID3Q02535 119 aa9.65□□□□□ -0.86
FXR1-219ENST00000484958 AKAP4Q5JQC9 854 aa9.65□□□□□ -0.86
FXR1-219ENST00000484958 AGGF1Q8N302 714 aaeCLIP9.65□□□□□ -0.86
FXR1-219ENST00000484958 RHOVQ96L33 236 aa9.65□□□□□ -0.86
FXR1-219ENST00000484958 SPATA32Q96LK8 384 aa9.65□□□□□ -0.86
FXR1-219ENST00000484958 TGIF2Q9GZN2 237 aa9.65□□□□□ -0.86
FXR1-219ENST00000484958 ECEL1O95672 775 aa9.64□□□□□ -0.87
FXR1-219ENST00000484958 DLGAP3O95886 979 aa9.64□□□□□ -0.87
FXR1-219ENST00000484958 PF4P02776 101 aa9.64□□□□□ -0.87
FXR1-219ENST00000484958 ADH5P11766 374 aa9.64□□□□□ -0.87
FXR1-219ENST00000484958 ERCC5P28715 1186 aaPredicted RBP9.64□□□□□ -0.87
FXR1-219ENST00000484958 METTL16Q86W50 562 aaKnown RBP9.64□□□□□ -0.87
FXR1-219ENST00000484958 DZIP1LQ8IYY4 767 aaKnown RBP9.64□□□□□ -0.87
FXR1-219ENST00000484958 ELMO3Q96BJ8 720 aa9.64□□□□□ -0.87
FXR1-219ENST00000484958 DDX41Q9UJV9 622 aaKnown RBP9.64□□□□□ -0.87
FXR1-219ENST00000484958 TLR6Q9Y2C9 796 aa9.64□□□□□ -0.87
FXR1-219ENST00000484958 TACC3Q9Y6A5 838 aa9.64□□□□□ -0.87
FXR1-219ENST00000484958 ZNF862O60290 1169 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 ALX3O95076 343 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 TIAF1O95411 115 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 IGHA1P01876 353 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 CTSBP07858 339 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 USP11P51784 963 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 ERVK-24P63145 666 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 PLA2G4EQ3MJ16 856 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 KIAA0825Q8IV33 1275 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 GATAD2BQ8WXI9 593 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 CCSER2Q9H7U1 834 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 KCNQ5Q9NR82 932 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 PICK1Q9NRD5 415 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 AP4E1Q9UPM8 1137 aa9.63□□□□□ -0.87
FXR1-219ENST00000484958 GSK3AP49840 483 aa9.62□□□□□ -0.87
FXR1-219ENST00000484958 GNL2Q13823 731 aaKnown RBP9.62□□□□□ -0.87
FXR1-219ENST00000484958 ZC3H12AQ5D1E8 599 aaKnown RBP9.62□□□□□ -0.87
FXR1-219ENST00000484958 GOLM1Q8NBJ4 401 aa9.62□□□□□ -0.87
FXR1-219ENST00000484958 SPON2Q9BUD6 331 aa9.62□□□□□ -0.87
FXR1-219ENST00000484958 PIDD1Q9HB75 910 aa9.62□□□□□ -0.87
FXR1-219ENST00000484958 COPRSQ9NQ92 184 aa9.62□□□□□ -0.87
FXR1-219ENST00000484958 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.62□□□□□ -0.87
FXR1-219ENST00000484958 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.61□□□□□ -0.87
FXR1-219ENST00000484958 DHX15O43143 795 aaKnown RBP9.61□□□□□ -0.87
FXR1-219ENST00000484958 RPL6Q02878 288 aaKnown RBP9.61□□□□□ -0.87
FXR1-219ENST00000484958 DYMQ7RTS9 669 aa9.61□□□□□ -0.87
FXR1-219ENST00000484958 KCT2Q8NC54 265 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms