RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 FUT4P22083 530 aa8.02□□□□□ -1.13
RC3H1-205ENST00000484867 BNIP3Q12983 259 aa8.02□□□□□ -1.13
RC3H1-205ENST00000484867 ECM1Q16610 540 aa8.02□□□□□ -1.13
RC3H1-205ENST00000484867 USPL1Q5W0Q7 1092 aa8.02□□□□□ -1.13
RC3H1-205ENST00000484867 ATG4DQ86TL0 474 aaPredicted RBP8.02□□□□□ -1.13
RC3H1-205ENST00000484867 CCDC97Q96F63 343 aaPredicted RBP8.02□□□□□ -1.13
RC3H1-205ENST00000484867 CORO1BQ9BR76 489 aa8.02□□□□□ -1.13
RC3H1-205ENST00000484867 ADAMTS6Q9UKP5 1117 aa8.02□□□□□ -1.13
RC3H1-205ENST00000484867 DAGLAQ9Y4D2 1042 aa8.02□□□□□ -1.13
RC3H1-205ENST00000484867 MBNL3Q9NUK0 354 aaKnown RBP8.01□□□□□ -1.13
RC3H1-205ENST00000484867 CRIM1Q9NZV1 1036 aa8.01□□□□□ -1.13
RC3H1-205ENST00000484867 BIN1O00499 593 aa8□□□□□ -1.13
RC3H1-205ENST00000484867 TMPRSS2O15393 492 aa8□□□□□ -1.13
RC3H1-205ENST00000484867 CD8BP10966 210 aa8□□□□□ -1.13
RC3H1-205ENST00000484867 PTPN12Q05209 780 aaKnown RBP8□□□□□ -1.13
RC3H1-205ENST00000484867 CYP27C1Q4G0S4 372 aa8□□□□□ -1.13
RC3H1-205ENST00000484867 SPOCD1Q6ZMY3 1216 aa8□□□□□ -1.13
RC3H1-205ENST00000484867 PLD6Q8N2A8 252 aaKnown RBP8□□□□□ -1.13
RC3H1-205ENST00000484867 LGR6Q9HBX8 967 aa8□□□□□ -1.13
RC3H1-205ENST00000484867 PCDHGC5Q9Y5F6 944 aa8□□□□□ -1.13
RC3H1-205ENST00000484867 RNASE1P07998 156 aaKnown RBP7.99□□□□□ -1.13
RC3H1-205ENST00000484867 DDX54Q8TDD1 881 aaKnown RBP7.99□□□□□ -1.13
RC3H1-205ENST00000484867 NETO1Q8TDF5 533 aa7.99□□□□□ -1.13
RC3H1-205ENST00000484867 WDR89Q96FK6 387 aaPredicted RBP7.99□□□□□ -1.13
RC3H1-205ENST00000484867 DBX1A6NMT0 343 aa7.98□□□□□ -1.13
RC3H1-205ENST00000484867 CDK5R2Q13319 367 aa7.98□□□□□ -1.13
RC3H1-205ENST00000484867 AP3B2Q13367 1082 aa7.98□□□□□ -1.13
RC3H1-205ENST00000484867 ZNF124Q15973 351 aa7.98□□□□□ -1.13
RC3H1-205ENST00000484867 FAM181AQ8N9Y4 354 aa7.98□□□□□ -1.13
RC3H1-205ENST00000484867 CCDC86Q9H6F5 360 aaKnown RBP7.98□□□□□ -1.13
RC3H1-205ENST00000484867 VAV3Q9UKW4 847 aa7.98□□□□□ -1.13
RC3H1-205ENST00000484867 FAM87AP0C7U9 286 aa7.97□□□□□ -1.13
RC3H1-205ENST00000484867 ZNF211Q13398 564 aaPredicted RBP7.97□□□□□ -1.13
RC3H1-205ENST00000484867 FBLN7Q53RD9 439 aa7.97□□□□□ -1.13
RC3H1-205ENST00000484867 ABCB6Q9NP58 842 aa7.97□□□□□ -1.13
RC3H1-205ENST00000484867 ANO2Q9NQ90 1003 aa7.97□□□□□ -1.13
RC3H1-205ENST00000484867 DISC1Q9NRI5 854 aa7.97□□□□□ -1.13
RC3H1-205ENST00000484867 ZNF862O60290 1169 aa7.96□□□□□ -1.14
RC3H1-205ENST00000484867 CD96P40200 585 aa7.96□□□□□ -1.14
RC3H1-205ENST00000484867 PRKCQQ04759 706 aa7.96□□□□□ -1.14
RC3H1-205ENST00000484867 RPS26P11Q5JNZ5 115 aaPredicted RBP7.96□□□□□ -1.14
RC3H1-205ENST00000484867 PRPF40BQ6NWY9 871 aaKnown RBP7.96□□□□□ -1.14
RC3H1-205ENST00000484867 TMEM40Q8WWA1 233 aa7.96□□□□□ -1.14
RC3H1-205ENST00000484867 FANCD2OSQ96PS1 177 aa7.96□□□□□ -1.14
RC3H1-205ENST00000484867 MKNK2Q9HBH9 465 aa7.96□□□□□ -1.14
RC3H1-205ENST00000484867 FARP2O94887 1054 aaPredicted RBP7.95□□□□□ -1.14
RC3H1-205ENST00000484867 LIG1P18858 919 aa7.95□□□□□ -1.14
RC3H1-205ENST00000484867 FAAP100Q0VG06 881 aa7.95□□□□□ -1.14
RC3H1-205ENST00000484867 PDE3AQ14432 1141 aa7.95□□□□□ -1.14
RC3H1-205ENST00000484867 KIF4BQ2VIQ3 1234 aa7.95□□□□□ -1.14
RC3H1-205ENST00000484867 CILP2Q8IUL8 1156 aa7.95□□□□□ -1.14
RC3H1-205ENST00000484867 LRRN4CLQ8ND94 238 aa7.95□□□□□ -1.14
RC3H1-205ENST00000484867 FAM168AQ92567 244 aa7.95□□□□□ -1.14
RC3H1-205ENST00000484867 RC3H2Q9HBD1 1191 aaKnown RBP7.95□□□□□ -1.14
RC3H1-205ENST00000484867 PLAGL2Q9UPG8 496 aa7.95□□□□□ -1.14
RC3H1-205ENST00000484867 MTMR7Q9Y216 660 aa7.95□□□□□ -1.14
RC3H1-205ENST00000484867 ICMTO60725 284 aa7.94□□□□□ -1.14
RC3H1-205ENST00000484867 IGHA2P01877 340 aa7.94□□□□□ -1.14
RC3H1-205ENST00000484867 OXCT1P55809 520 aa7.94□□□□□ -1.14
RC3H1-205ENST00000484867 MESP2Q0VG99 397 aa7.94□□□□□ -1.14
RC3H1-205ENST00000484867 EHD4Q9H223 541 aa7.94□□□□□ -1.14
RC3H1-205ENST00000484867 EGFL7Q9UHF1 273 aa7.94□□□□□ -1.14
RC3H1-205ENST00000484867 LEFTY1O75610 366 aa7.93□□□□□ -1.14
RC3H1-205ENST00000484867 PPP1R15AO75807 674 aaPredicted RBP7.93□□□□□ -1.14
RC3H1-205ENST00000484867 ABL1P00519 1130 aa7.93□□□□□ -1.14
RC3H1-205ENST00000484867 ID3Q02535 119 aa7.93□□□□□ -1.14
RC3H1-205ENST00000484867 ORC1Q13415 861 aa7.93□□□□□ -1.14
RC3H1-205ENST00000484867 SMYD4Q8IYR2 804 aaPredicted RBP7.93□□□□□ -1.14
RC3H1-205ENST00000484867 FAM129BQ96TA1 746 aa7.93□□□□□ -1.14
RC3H1-205ENST00000484867 ATXN3LQ9H3M9 355 aa7.93□□□□□ -1.14
RC3H1-205ENST00000484867 NPHS2Q9NP85 383 aa7.93□□□□□ -1.14
RC3H1-205ENST00000484867 CARNS1A5YM72 827 aa7.92□□□□□ -1.14
RC3H1-205ENST00000484867 KRTAP9-7A8MTY7 169 aa7.92□□□□□ -1.14
RC3H1-205ENST00000484867 ARHGAP4P98171 946 aa7.92□□□□□ -1.14
RC3H1-205ENST00000484867 IFI16Q16666 785 aaKnown RBP7.92□□□□□ -1.14
RC3H1-205ENST00000484867 FAM214BQ7L5A3 538 aa7.92□□□□□ -1.14
RC3H1-205ENST00000484867 DUSP23Q9BVJ7 150 aa7.92□□□□□ -1.14
RC3H1-205ENST00000484867 TNKS2Q9H2K2 1166 aa7.92□□□□□ -1.14
RC3H1-205ENST00000484867 KRT82Q9NSB4 513 aa7.92□□□□□ -1.14
RC3H1-205ENST00000484867 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
RC3H1-205ENST00000484867 PDZD3Q86UT5 571 aa7.91□□□□□ -1.14
RC3H1-205ENST00000484867 ARID3CA6NKF2 412 aa7.9□□□□□ -1.14
RC3H1-205ENST00000484867 CPNE3O75131 537 aaKnown RBP7.9□□□□□ -1.14
RC3H1-205ENST00000484867 NEFLP07196 543 aa7.9□□□□□ -1.14
RC3H1-205ENST00000484867 NEFMP07197 916 aa7.9□□□□□ -1.14
RC3H1-205ENST00000484867 SLFN14P0C7P3 912 aa7.9□□□□□ -1.14
RC3H1-205ENST00000484867 TTLL4Q14679 1199 aa7.9□□□□□ -1.14
RC3H1-205ENST00000484867 AOC3Q16853 763 aa7.9□□□□□ -1.14
RC3H1-205ENST00000484867 FLAD1Q8NFF5 587 aa7.9□□□□□ -1.14
RC3H1-205ENST00000484867 PI4K2BQ8TCG2 481 aa7.9□□□□□ -1.14
RC3H1-205ENST00000484867 CEACAM5P06731 702 aa7.89□□□□□ -1.15
RC3H1-205ENST00000484867 GSTP1P09211 210 aaKnown RBP7.89□□□□□ -1.15
RC3H1-205ENST00000484867 CCDC74AQ96AQ1 378 aa7.89□□□□□ -1.15
RC3H1-205ENST00000484867 KRTAP4-11Q9BYQ6 195 aa7.89□□□□□ -1.15
RC3H1-205ENST00000484867 ZC3H12CQ9C0D7 883 aaKnown RBP7.89□□□□□ -1.15
RC3H1-205ENST00000484867 PIDD1Q9HB75 910 aa7.89□□□□□ -1.15
RC3H1-205ENST00000484867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.89□□□□□ -1.15
RC3H1-205ENST00000484867 BRPF3Q9ULD4 1205 aa7.89□□□□□ -1.15
RC3H1-205ENST00000484867 ZNF157P51786 506 aaPredicted RBP7.88□□□□□ -1.15
RC3H1-205ENST00000484867 SLC23A3Q6PIS1 610 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms