RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 UBLCP1Q8WVY7 318 aaPredicted RBP17.05■□□□□ 0.32
RXRA-203ENST00000484822 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
RXRA-203ENST00000484822 GOLGA6CA6NDK9 693 aa17.05■□□□□ 0.32
RXRA-203ENST00000484822 GOLGA6DP0CG33 693 aa17.05■□□□□ 0.32
RXRA-203ENST00000484822 CHMLP26374 656 aa17.05■□□□□ 0.32
RXRA-203ENST00000484822 TBC1D5Q92609 795 aa17.05■□□□□ 0.32
RXRA-203ENST00000484822 CBX8Q9HC52 389 aa17.05■□□□□ 0.32
RXRA-203ENST00000484822 GOLGA6AQ9NYA3 693 aa17.05■□□□□ 0.32
RXRA-203ENST00000484822 ZFYP08048 801 aaPredicted RBP17.05■□□□□ 0.32
RXRA-203ENST00000484822 LRRC27Q9C0I9 530 aa17.05■□□□□ 0.32
RXRA-203ENST00000484822 UGGT1Q9NYU2 1555 aa17.05■□□□□ 0.32
RXRA-203ENST00000484822 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
RXRA-203ENST00000484822 VIMP08670 466 aaKnown RBP17.04■□□□□ 0.32
RXRA-203ENST00000484822 ATP2B3Q16720 1220 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 APBB1IPQ7Z5R6 666 aaPredicted RBP17.04■□□□□ 0.32
RXRA-203ENST00000484822 JDP2Q8WYK2 163 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 DDX12PQ92771 950 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 RTCBQ9Y3I0 505 aaKnown RBP17.04■□□□□ 0.32
RXRA-203ENST00000484822 GADD45BO75293 160 aaPredicted RBP17.04■□□□□ 0.32
RXRA-203ENST00000484822 SETDB1Q15047 1291 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 CEP85Q6P2H3 762 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 TBCAO75347 108 aaKnown RBP17.04■□□□□ 0.32
RXRA-203ENST00000484822 CCT6AP40227 531 aaKnown RBP17.04■□□□□ 0.32
RXRA-203ENST00000484822 KDM5AP29375 1690 aaKnown RBP17.04■□□□□ 0.32
RXRA-203ENST00000484822 FERP16591 822 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 SARNPP82979 210 aaKnown RBP17.04■□□□□ 0.32
RXRA-203ENST00000484822 KRT24Q2M2I5 525 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
RXRA-203ENST00000484822 DTNBO60941 627 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 TNNC1P63316 161 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 RUFY3Q7L099 469 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 NAPGQ99747 312 aaPredicted RBP17.04■□□□□ 0.32
RXRA-203ENST00000484822 LMBRD1Q9NUN5 540 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 STX8Q9UNK0 236 aa17.04■□□□□ 0.32
RXRA-203ENST00000484822 TMEM110-MUSTN1A8MSY1 372 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 B4DLN1 442 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 MRPL12P52815 198 aaKnown RBP17.03■□□□□ 0.32
RXRA-203ENST00000484822 ZSCAN26Q16670 478 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 STXBP4Q6ZWJ1 553 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 PCK1P35558 622 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 GJC1P36383 396 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 PPFIBP2Q8ND30 876 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 PPP1R12CQ9BZL4 782 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 LMBR1Q8WVP7 490 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 TMEM63CQ9P1W3 806 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 IGSF22Q8N9C0 903 aa17.03■□□□□ 0.32
RXRA-203ENST00000484822 TSPOAP1O95153 1857 aa17.02■□□□□ 0.32
RXRA-203ENST00000484822 METP08581 1390 aa17.02■□□□□ 0.32
RXRA-203ENST00000484822 CHL1O00533 1208 aa17.02■□□□□ 0.32
RXRA-203ENST00000484822 PDE4BQ07343 736 aa17.02■□□□□ 0.32
RXRA-203ENST00000484822 NPHP4O75161 1426 aaPredicted RBP17.02■□□□□ 0.32
RXRA-203ENST00000484822 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.32
RXRA-203ENST00000484822 HGSO14964 777 aaPredicted RBP17.02■□□□□ 0.31
RXRA-203ENST00000484822 PRPHP41219 470 aa17.02■□□□□ 0.31
RXRA-203ENST00000484822 FERMT2Q96AC1 680 aa17.02■□□□□ 0.31
RXRA-203ENST00000484822 COMMD10Q9Y6G5 202 aa17.02■□□□□ 0.31
RXRA-203ENST00000484822 NEK11Q8NG66 645 aa17.02■□□□□ 0.31
RXRA-203ENST00000484822 GSTA5Q7RTV2 222 aa17.01■□□□□ 0.31
RXRA-203ENST00000484822 PNMA8AQ86V59 439 aaPredicted RBP17.01■□□□□ 0.31
RXRA-203ENST00000484822 KDM6BO15054 1643 aa17.01■□□□□ 0.31
RXRA-203ENST00000484822 TSNARE1Q96NA8 513 aa17.01■□□□□ 0.31
RXRA-203ENST00000484822 SHROOM2Q13796 1616 aa17.01■□□□□ 0.31
RXRA-203ENST00000484822 BUB1BO60566 1050 aaPredicted RBP17.01■□□□□ 0.31
RXRA-203ENST00000484822 MAP3K9P80192 1104 aa17.01■□□□□ 0.31
RXRA-203ENST00000484822 FANCCQ00597 558 aa17.01■□□□□ 0.31
RXRA-203ENST00000484822 CCDC174Q6PII3 467 aa17.01■□□□□ 0.31
RXRA-203ENST00000484822 CCDC63Q8NA47 563 aa17.01■□□□□ 0.31
RXRA-203ENST00000484822 SEC62Q99442 399 aaKnown RBP17.01■□□□□ 0.31
RXRA-203ENST00000484822 NAP1L3Q99457 506 aaPredicted RBP17.01■□□□□ 0.31
RXRA-203ENST00000484822 EYA3Q99504 573 aa17.01■□□□□ 0.31
RXRA-203ENST00000484822 RNASE9P60153 205 aaKnown RBP17.01■□□□□ 0.31
RXRA-203ENST00000484822 MTRF1LQ9UGC7 380 aaKnown RBP17.01■□□□□ 0.31
RXRA-203ENST00000484822 RXRAP19793 462 aa17■□□□□ 0.31
RXRA-203ENST00000484822 INTS8Q75QN2 995 aaKnown RBP17■□□□□ 0.31
RXRA-203ENST00000484822 PSMD1Q99460 953 aa17■□□□□ 0.31
RXRA-203ENST00000484822 KRT23Q9C075 422 aa17■□□□□ 0.31
RXRA-203ENST00000484822 IFIT1BQ5T764 474 aaKnown RBP17■□□□□ 0.31
RXRA-203ENST00000484822 OTUD7AQ8TE49 926 aaPredicted RBP17■□□□□ 0.31
RXRA-203ENST00000484822 CLSTN2Q9H4D0 955 aa17■□□□□ 0.31
RXRA-203ENST00000484822 ATP2A1O14983 1001 aa17■□□□□ 0.31
RXRA-203ENST00000484822 MAP2K2P36507 400 aa17■□□□□ 0.31
RXRA-203ENST00000484822 PLCB3Q01970 1234 aa17■□□□□ 0.31
RXRA-203ENST00000484822 C8orf74Q6P047 294 aa17■□□□□ 0.31
RXRA-203ENST00000484822 SLC52A2Q9HAB3 445 aa17■□□□□ 0.31
RXRA-203ENST00000484822 SF3A3Q12874 501 aaKnown RBP eCLIP17■□□□□ 0.31
RXRA-203ENST00000484822 CWF19L2Q2TBE0 894 aaKnown RBP17■□□□□ 0.31
RXRA-203ENST00000484822 BRAPQ7Z569 592 aa17■□□□□ 0.31
RXRA-203ENST00000484822 VPS16Q9H269 839 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 MRVI1Q9Y6F6 885 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
RXRA-203ENST00000484822 TMTC2Q8N394 836 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 ZBTB7BO15156 539 aaPredicted RBP16.99■□□□□ 0.31
RXRA-203ENST00000484822 SEPT6Q14141 434 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 DHX32Q7L7V1 743 aaKnown RBP16.99■□□□□ 0.31
RXRA-203ENST00000484822 CABS1Q96KC9 395 aa16.99■□□□□ 0.31
RXRA-203ENST00000484822 PLIN2Q99541 437 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms