RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 NACAP1Q9BZK3 213 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 GPR75-ASB3A0A0A6YYF3 556 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 GSG1L2A8MUP6 293 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 PRKAB2O43741 272 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 BTDP43251 543 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 PRELPP51888 382 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 ALX1Q15699 326 aa24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 EPB41L4AQ9HCS5 686 aaPredicted RBP24.4■■□□□ 1.5
VCPKMT-203ENST00000484763 SBF1O95248 1867 aa24.39■■□□□ 1.49
VCPKMT-203ENST00000484763 HHIPL2Q6UWX4 724 aa24.39■■□□□ 1.49
VCPKMT-203ENST00000484763 IFNL3Q8IZI9 196 aa24.39■■□□□ 1.49
VCPKMT-203ENST00000484763 TEKT1Q969V4 418 aa24.39■■□□□ 1.49
VCPKMT-203ENST00000484763 DAGLAQ9Y4D2 1042 aa24.39■■□□□ 1.49
VCPKMT-203ENST00000484763 SRCAPQ6ZRS2 3230 aa24.39■■□□□ 1.49
VCPKMT-203ENST00000484763 CYP21A2P08686 494 aa24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 YBX3P16989 372 aaKnown RBP eCLIP24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 SCNN1DP51172 638 aa24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 HDLBPQ00341 1268 aaKnown RBP24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 CXCL9Q07325 125 aa24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 IMMTQ16891 758 aaKnown RBP24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 MRIQ9BWK5 157 aa24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 NAPBQ9H115 298 aa24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 CDK5RAP2Q96SN8 1893 aa24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 PLCG2P16885 1265 aa24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 TSGA10IPQ3SY00 556 aa24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 CIAPIN1Q6FI81 312 aa24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 SDR42E1Q8WUS8 393 aa24.38■■□□□ 1.49
VCPKMT-203ENST00000484763 LMNB1P20700 586 aa24.37■■□□□ 1.49
VCPKMT-203ENST00000484763 DDRGK1Q96HY6 314 aa24.37■■□□□ 1.49
VCPKMT-203ENST00000484763 CRKP46108 304 aa24.36■■□□□ 1.49
VCPKMT-203ENST00000484763 TDO2P48775 406 aa24.36■■□□□ 1.49
VCPKMT-203ENST00000484763 KRT32Q14532 448 aa24.36■■□□□ 1.49
VCPKMT-203ENST00000484763 TNIP1Q15025 636 aa24.36■■□□□ 1.49
VCPKMT-203ENST00000484763 GIMAP6Q6P9H5 292 aa24.36■■□□□ 1.49
VCPKMT-203ENST00000484763 SH3RF3Q8TEJ3 882 aaPredicted RBP24.36■■□□□ 1.49
VCPKMT-203ENST00000484763 NAV1Q8NEY1 1877 aa24.36■■□□□ 1.49
VCPKMT-203ENST00000484763 FOCADQ5VW36 1801 aa24.36■■□□□ 1.49
VCPKMT-203ENST00000484763 FZD9O00144 591 aa24.35■■□□□ 1.49
VCPKMT-203ENST00000484763 AGBL3Q8NEM8 1001 aa24.35■■□□□ 1.49
VCPKMT-203ENST00000484763 GMLQ99445 158 aa24.35■■□□□ 1.49
VCPKMT-203ENST00000484763 SERPINA10Q9UK55 444 aa24.35■■□□□ 1.49
VCPKMT-203ENST00000484763 BAZ2AQ9UIF9 1905 aaKnown RBP24.35■■□□□ 1.49
VCPKMT-203ENST00000484763 ATP8A2Q9NTI2 1148 aa24.35■■□□□ 1.49
VCPKMT-203ENST00000484763 ZNF213O14771 459 aa24.34■■□□□ 1.49
VCPKMT-203ENST00000484763 EIF6P56537 245 aaKnown RBP24.34■■□□□ 1.49
VCPKMT-203ENST00000484763 ZDHHC15Q96MV8 337 aa24.34■■□□□ 1.49
VCPKMT-203ENST00000484763 TAF6LQ9Y6J9 622 aa24.34■■□□□ 1.49
VCPKMT-203ENST00000484763 LAMB1P07942 1786 aa24.34■■□□□ 1.49
VCPKMT-203ENST00000484763 ECM29Q5VYK3 1845 aa24.34■■□□□ 1.49
VCPKMT-203ENST00000484763 ADCK5Q3MIX3 580 aa24.33■■□□□ 1.49
VCPKMT-203ENST00000484763 JAKMIP1Q96N16 626 aaKnown RBP24.33■■□□□ 1.49
VCPKMT-203ENST00000484763 TM6SF1Q9BZW5 370 aa24.33■■□□□ 1.49
VCPKMT-203ENST00000484763 TIAM2Q8IVF5 1701 aa24.33■■□□□ 1.49
VCPKMT-203ENST00000484763 PSMA5P28066 241 aa24.33■■□□□ 1.48
VCPKMT-203ENST00000484763 USP5P45974 858 aa24.33■■□□□ 1.48
VCPKMT-203ENST00000484763 RHBDL3P58872 404 aa24.33■■□□□ 1.48
VCPKMT-203ENST00000484763 HAND2P61296 217 aa24.33■■□□□ 1.48
VCPKMT-203ENST00000484763 DCP1AQ9NPI6 582 aaPredicted RBP24.33■■□□□ 1.48
VCPKMT-203ENST00000484763 HDAC9Q9UKV0 1011 aa24.33■■□□□ 1.48
VCPKMT-203ENST00000484763 ZBTB12Q9Y330 459 aaPredicted RBP24.33■■□□□ 1.48
VCPKMT-203ENST00000484763 TEX11Q8IYF3 940 aa24.32■■□□□ 1.48
VCPKMT-203ENST00000484763 IL27Q8NEV9 243 aa24.32■■□□□ 1.48
VCPKMT-203ENST00000484763 CASTP20810 708 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-203ENST00000484763 RBM5P52756 815 aaKnown RBP eCLIP24.31■■□□□ 1.48
VCPKMT-203ENST00000484763 APOBEC3HQ6NTF7 200 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-203ENST00000484763 OGFOD1Q8N543 542 aa24.31■■□□□ 1.48
VCPKMT-203ENST00000484763 DDX60LQ5H9U9 1706 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-203ENST00000484763 ST18O60284 1047 aa24.31■■□□□ 1.48
VCPKMT-203ENST00000484763 RPS12P25398 132 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-203ENST00000484763 UPF3BQ9BZI7 483 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-203ENST00000484763 E7EWF7 191 aa24.3■■□□□ 1.48
VCPKMT-203ENST00000484763 NEK4P51957 841 aa24.3■■□□□ 1.48
VCPKMT-203ENST00000484763 TGFBRAP1Q8WUH2 860 aa24.3■■□□□ 1.48
VCPKMT-203ENST00000484763 ZSWIM6Q9HCJ5 1215 aa24.3■■□□□ 1.48
VCPKMT-203ENST00000484763 ARPP21Q9UBL0 812 aaPredicted RBP24.3■■□□□ 1.48
VCPKMT-203ENST00000484763 USP17L8P0C7I0 530 aa24.29■■□□□ 1.48
VCPKMT-203ENST00000484763 GPR162Q16538 588 aa24.29■■□□□ 1.48
VCPKMT-203ENST00000484763 STOX1Q6ZVD7 989 aa24.29■■□□□ 1.48
VCPKMT-203ENST00000484763 MKRN1Q9UHC7 482 aaKnown RBP24.29■■□□□ 1.48
VCPKMT-203ENST00000484763 UTRNP46939 3433 aa24.29■■□□□ 1.48
VCPKMT-203ENST00000484763 BECN1Q14457 450 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 CFAP100Q494V2 611 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 SNX21Q969T3 373 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 NEK1Q96PY6 1258 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 NBPF3Q9H094 633 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 USP40Q9NVE5 1235 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 CYP46A1Q9Y6A2 500 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 ZNF541Q9H0D2 1346 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 MMP14P50281 582 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 PPARAQ07869 468 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 CDC42EP5Q6NZY7 148 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 CTR9Q6PD62 1173 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 BLOC1S2Q6QNY1 142 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 RUFY3Q7L099 469 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 IPO9Q96P70 1041 aaKnown RBP24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 FLT1P17948 1338 aa24.28■■□□□ 1.48
VCPKMT-203ENST00000484763 TBC1D10CQ8IV04 446 aa24.27■■□□□ 1.48
VCPKMT-203ENST00000484763 MCM9Q9NXL9 1143 aa24.27■■□□□ 1.48
VCPKMT-203ENST00000484763 ANAPC4Q9UJX5 808 aa24.27■■□□□ 1.48
VCPKMT-203ENST00000484763 PCDHAC2Q9Y5I4 1007 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms