RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 BIN2Q9UBW5 565 aaPredicted RBP19.27■□□□□ 0.68
HLA-DQB1-208ENST00000484729 DLL1O00548 723 aa19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 FRAT2O75474 233 aaPredicted RBP19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 NBPF7P0C2Y1 421 aaPredicted RBP19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 GJA8P48165 433 aa19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 HDLBPQ00341 1268 aaKnown RBP19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 APOBEC3HQ6NTF7 200 aaKnown RBP19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 SLC17A8Q8NDX2 589 aa19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 NKX2-3Q8TAU0 364 aa19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 ZDHHC15Q96MV8 337 aa19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 RNF208Q9H0X6 261 aa19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 PRO3102Q9H379 93 aa19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 TMOD2Q9NZR1 351 aa19.26■□□□□ 0.67
HLA-DQB1-208ENST00000484729 MYPNQ86TC9 1320 aa19.25■□□□□ 0.67
HLA-DQB1-208ENST00000484729 ADGRA2Q96PE1 1338 aa19.25■□□□□ 0.67
HLA-DQB1-208ENST00000484729 GJB1P08034 283 aa19.25■□□□□ 0.67
HLA-DQB1-208ENST00000484729 HOXD10P28358 340 aa19.25■□□□□ 0.67
HLA-DQB1-208ENST00000484729 PPATQ06203 517 aa19.25■□□□□ 0.67
HLA-DQB1-208ENST00000484729 ANKRD23Q86SG2 305 aa19.25■□□□□ 0.67
HLA-DQB1-208ENST00000484729 FAM83AQ86UY5 434 aa19.25■□□□□ 0.67
HLA-DQB1-208ENST00000484729 MRPL50Q8N5N7 158 aaKnown RBP19.25■□□□□ 0.67
HLA-DQB1-208ENST00000484729 KAZALD1Q96I82 304 aa19.25■□□□□ 0.67
HLA-DQB1-208ENST00000484729 HTATIP2Q9BUP3 242 aa19.25■□□□□ 0.67
HLA-DQB1-208ENST00000484729 E9PSI1 815 aa19.24■□□□□ 0.67
HLA-DQB1-208ENST00000484729 DCAF15Q66K64 600 aa19.24■□□□□ 0.67
HLA-DQB1-208ENST00000484729 TBC1D22AQ8WUA7 517 aa19.24■□□□□ 0.67
HLA-DQB1-208ENST00000484729 HOOK2Q96ED9 719 aa19.24■□□□□ 0.67
HLA-DQB1-208ENST00000484729 ZNF341Q9BYN7 854 aa19.24■□□□□ 0.67
HLA-DQB1-208ENST00000484729 BICC1Q9H694 974 aaKnown RBP19.24■□□□□ 0.67
HLA-DQB1-208ENST00000484729 UTYO14607 1347 aa19.24■□□□□ 0.67
HLA-DQB1-208ENST00000484729 PRKCZQ05513 592 aa19.23■□□□□ 0.67
HLA-DQB1-208ENST00000484729 MOGSQ13724 837 aa19.23■□□□□ 0.67
HLA-DQB1-208ENST00000484729 LRRC24Q50LG9 513 aa19.23■□□□□ 0.67
HLA-DQB1-208ENST00000484729 PTPRCP08575 1304 aa19.23■□□□□ 0.67
HLA-DQB1-208ENST00000484729 MROH5Q6ZUA9 1318 aa19.23■□□□□ 0.67
HLA-DQB1-208ENST00000484729 ZBTB7BO15156 539 aaPredicted RBP19.22■□□□□ 0.67
HLA-DQB1-208ENST00000484729 BCAMP50895 628 aa19.22■□□□□ 0.67
HLA-DQB1-208ENST00000484729 CAVIN4Q5BKX8 364 aa19.22■□□□□ 0.67
HLA-DQB1-208ENST00000484729 FKBP1CQ5VVH2 108 aa19.22■□□□□ 0.67
HLA-DQB1-208ENST00000484729 U2AF1L4Q8WU68 220 aaKnown RBP19.22■□□□□ 0.67
HLA-DQB1-208ENST00000484729 UNC93B1Q9H1C4 597 aa19.22■□□□□ 0.67
HLA-DQB1-208ENST00000484729 GABRQQ9UN88 632 aa19.22■□□□□ 0.67
HLA-DQB1-208ENST00000484729 NR2E3Q9Y5X4 410 aa19.22■□□□□ 0.67
HLA-DQB1-208ENST00000484729 A0A0C4DFX4 3053 aa19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 SOX1O00570 391 aaPredicted RBP19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 FARP2O94887 1054 aaPredicted RBP19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 CYP2C8P10632 490 aa19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 UBXN2AP68543 259 aa19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 TCP10Q12799 353 aa19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 RABL6Q3YEC7 729 aaPredicted RBP19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 METTL24Q5JXM2 366 aa19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 SSH1Q8WYL5 1049 aa19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 MRIQ9BWK5 157 aa19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 KCNH4Q9UQ05 1017 aa19.21■□□□□ 0.67
HLA-DQB1-208ENST00000484729 ANKRD44Q8N8A2 993 aa19.2■□□□□ 0.66
HLA-DQB1-208ENST00000484729 ZNF112Q9UJU3 913 aa19.2■□□□□ 0.66
HLA-DQB1-208ENST00000484729 RPAP1Q9BWH6 1393 aaPredicted RBP19.19■□□□□ 0.66
HLA-DQB1-208ENST00000484729 COL6A3P12111 3177 aa19.19■□□□□ 0.66
HLA-DQB1-208ENST00000484729 FCGRTP55899 365 aa19.19■□□□□ 0.66
HLA-DQB1-208ENST00000484729 GPAT2Q6NUI2 795 aa19.19■□□□□ 0.66
HLA-DQB1-208ENST00000484729 VGLL2Q8N8G2 317 aa19.19■□□□□ 0.66
HLA-DQB1-208ENST00000484729 FAM151AQ8WW52 585 aa19.19■□□□□ 0.66
HLA-DQB1-208ENST00000484729 LRCH3Q96II8 777 aa19.19■□□□□ 0.66
HLA-DQB1-208ENST00000484729 PDE8BO95263 885 aa19.18■□□□□ 0.66
HLA-DQB1-208ENST00000484729 BCRP11274 1271 aa19.18■□□□□ 0.66
HLA-DQB1-208ENST00000484729 SLFN5Q08AF3 891 aa19.18■□□□□ 0.66
HLA-DQB1-208ENST00000484729 HHIPL2Q6UWX4 724 aa19.18■□□□□ 0.66
HLA-DQB1-208ENST00000484729 PARK7Q99497 189 aaKnown RBP19.18■□□□□ 0.66
HLA-DQB1-208ENST00000484729 MAST3O60307 1309 aa19.18■□□□□ 0.66
HLA-DQB1-208ENST00000484729 EVI5O60447 810 aa19.17■□□□□ 0.66
HLA-DQB1-208ENST00000484729 SGPL1O95470 568 aa19.17■□□□□ 0.66
HLA-DQB1-208ENST00000484729 ELNP15502 786 aa19.17■□□□□ 0.66
HLA-DQB1-208ENST00000484729 NFIAQ12857 509 aa19.17■□□□□ 0.66
HLA-DQB1-208ENST00000484729 SLAIN1Q8ND83 568 aa19.17■□□□□ 0.66
HLA-DQB1-208ENST00000484729 KLHDC4Q8TBB5 520 aa19.17■□□□□ 0.66
HLA-DQB1-208ENST00000484729 SMC4Q9NTJ3 1288 aa19.17■□□□□ 0.66
HLA-DQB1-208ENST00000484729 STAP2Q9UGK3 403 aa19.17■□□□□ 0.66
HLA-DQB1-208ENST00000484729 ADCY3O60266 1144 aa19.16■□□□□ 0.66
HLA-DQB1-208ENST00000484729 CDC42EP5Q6NZY7 148 aa19.16■□□□□ 0.66
HLA-DQB1-208ENST00000484729 CDCA7LQ96GN5 454 aa19.16■□□□□ 0.66
HLA-DQB1-208ENST00000484729 SUGT1Q9Y2Z0 365 aa19.16■□□□□ 0.66
HLA-DQB1-208ENST00000484729 CUL9Q8IWT3 2517 aa19.16■□□□□ 0.66
HLA-DQB1-208ENST00000484729 TFRCP02786 760 aaKnown RBP19.15■□□□□ 0.66
HLA-DQB1-208ENST00000484729 FLT3LGP49771 235 aa19.15■□□□□ 0.66
HLA-DQB1-208ENST00000484729 DIXDC1Q155Q3 683 aa19.15■□□□□ 0.66
HLA-DQB1-208ENST00000484729 ALDH1L2Q3SY69 923 aa19.15■□□□□ 0.66
HLA-DQB1-208ENST00000484729 NOL9Q5SY16 702 aaKnown RBP19.15■□□□□ 0.66
HLA-DQB1-208ENST00000484729 ZFPM1Q8IX07 1006 aa19.15■□□□□ 0.66
HLA-DQB1-208ENST00000484729 DEFB118Q96PH6 123 aa19.15■□□□□ 0.66
HLA-DQB1-208ENST00000484729 USP44Q9H0E7 712 aa19.15■□□□□ 0.66
HLA-DQB1-208ENST00000484729 DAGLAQ9Y4D2 1042 aa19.15■□□□□ 0.66
HLA-DQB1-208ENST00000484729 MGAMO43451 1857 aa19.15■□□□□ 0.66
HLA-DQB1-208ENST00000484729 AK9Q5TCS8 1911 aa19.14■□□□□ 0.65
HLA-DQB1-208ENST00000484729 INHAP05111 366 aa19.14■□□□□ 0.65
HLA-DQB1-208ENST00000484729 FAM198AQ9UFP1 575 aa19.14■□□□□ 0.65
HLA-DQB1-208ENST00000484729 LAMA3Q16787 3333 aa19.14■□□□□ 0.65
HLA-DQB1-208ENST00000484729 A0A1W2PPC1 479 aa19.13■□□□□ 0.65
HLA-DQB1-208ENST00000484729 CXCL11O14625 94 aa19.13■□□□□ 0.65
HLA-DQB1-208ENST00000484729 IFIT1P09914 478 aaKnown RBP19.12■□□□□ 0.65
HLA-DQB1-208ENST00000484729 FGFR2P21802 821 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms