RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 VEGFAP15692 232 aaPredicted RBP22.89■■□□□ 1.25
PDLIM4-207ENST00000484620 MCMDC2Q4G0Z9 681 aa22.89■■□□□ 1.25
PDLIM4-207ENST00000484620 APOBEC3HQ6NTF7 200 aaKnown RBP22.89■■□□□ 1.25
PDLIM4-207ENST00000484620 CWC27Q6UX04 472 aaKnown RBP22.89■■□□□ 1.25
PDLIM4-207ENST00000484620 USP50Q70EL3 339 aaPredicted RBP22.89■■□□□ 1.25
PDLIM4-207ENST00000484620 OSBP2Q969R2 916 aa22.89■■□□□ 1.25
PDLIM4-207ENST00000484620 ZBED3Q96IU2 234 aaPredicted RBP22.89■■□□□ 1.25
PDLIM4-207ENST00000484620 FAM227BQ96M60 508 aa22.89■■□□□ 1.25
PDLIM4-207ENST00000484620 PUS7LQ9H0K6 701 aaKnown RBP22.89■■□□□ 1.25
PDLIM4-207ENST00000484620 ECM29Q5VYK3 1845 aa22.89■■□□□ 1.25
PDLIM4-207ENST00000484620 RAD50Q92878 1312 aa22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 A0A0D9SFI3 127 aa22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 WNT10BO00744 389 aa22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 MBD4O95243 580 aa22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 MFAP1P55081 439 aaKnown RBP22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 TRPM4Q8TD43 1214 aa22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 ZNF526Q8TF50 670 aaPredicted RBP22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 PRMT6Q96LA8 375 aaPredicted RBP22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 TAF1DQ9H5J8 278 aaPredicted RBP22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 TMOD2Q9NZR1 351 aa22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 PCDHAC2Q9Y5I4 1007 aa22.88■■□□□ 1.25
PDLIM4-207ENST00000484620 M0R2C6 588 aa22.87■■□□□ 1.25
PDLIM4-207ENST00000484620 PNMA8AQ86V59 439 aaPredicted RBP22.87■■□□□ 1.25
PDLIM4-207ENST00000484620 SEC62Q99442 399 aaKnown RBP22.87■■□□□ 1.25
PDLIM4-207ENST00000484620 RIOK1Q9BRS2 568 aaKnown RBP22.87■■□□□ 1.25
PDLIM4-207ENST00000484620 RRAGCQ9HB90 399 aa22.87■■□□□ 1.25
PDLIM4-207ENST00000484620 USP40Q9NVE5 1235 aa22.87■■□□□ 1.25
PDLIM4-207ENST00000484620 POTECB2RU33 542 aa22.86■■□□□ 1.25
PDLIM4-207ENST00000484620 GPAA1O43292 621 aa22.86■■□□□ 1.25
PDLIM4-207ENST00000484620 EGFRP00533 1210 aa22.86■■□□□ 1.25
PDLIM4-207ENST00000484620 DYNLL1P63167 89 aaKnown RBP22.86■■□□□ 1.25
PDLIM4-207ENST00000484620 NBPF9Q3BBW0 867 aa22.86■■□□□ 1.25
PDLIM4-207ENST00000484620 CDC42EP5Q6NZY7 148 aa22.86■■□□□ 1.25
PDLIM4-207ENST00000484620 CRNKL1Q9BZJ0 848 aaKnown RBP22.86■■□□□ 1.25
PDLIM4-207ENST00000484620 TDRD3Q9H7E2 651 aaKnown RBP22.86■■□□□ 1.25
PDLIM4-207ENST00000484620 ARMT1Q9H993 441 aa22.86■■□□□ 1.25
PDLIM4-207ENST00000484620 SPDYE2Q495Y8 402 aa22.85■■□□□ 1.25
PDLIM4-207ENST00000484620 TEX11Q8IYF3 940 aa22.85■■□□□ 1.25
PDLIM4-207ENST00000484620 LCORLQ8N3X6 602 aa22.85■■□□□ 1.25
PDLIM4-207ENST00000484620 CCDC171Q6TFL3 1326 aa22.84■■□□□ 1.25
PDLIM4-207ENST00000484620 GNAT2P19087 354 aa22.84■■□□□ 1.25
PDLIM4-207ENST00000484620 RHBDL3P58872 404 aa22.84■■□□□ 1.25
PDLIM4-207ENST00000484620 SH3RF3Q8TEJ3 882 aaPredicted RBP22.84■■□□□ 1.25
PDLIM4-207ENST00000484620 GPBP1L1Q9HC44 474 aaPredicted RBP22.84■■□□□ 1.25
PDLIM4-207ENST00000484620 NMRK2Q9NPI5 230 aa22.84■■□□□ 1.25
PDLIM4-207ENST00000484620 ZNF70Q9UC06 446 aaPredicted RBP22.84■■□□□ 1.25
PDLIM4-207ENST00000484620 YY1P25490 414 aa22.83■■□□□ 1.25
PDLIM4-207ENST00000484620 HIRAP54198 1017 aaPredicted RBP22.83■■□□□ 1.25
PDLIM4-207ENST00000484620 EAPPQ56P03 285 aaPredicted RBP22.83■■□□□ 1.25
PDLIM4-207ENST00000484620 STRBPQ96SI9 672 aaKnown RBP22.83■■□□□ 1.25
PDLIM4-207ENST00000484620 ESYT1Q9BSJ8 1104 aa22.83■■□□□ 1.25
PDLIM4-207ENST00000484620 CLRN2A0PK11 232 aa22.82■■□□□ 1.24
PDLIM4-207ENST00000484620 SGSM2O43147 1006 aa22.82■■□□□ 1.24
PDLIM4-207ENST00000484620 CCDC129Q6ZRS4 1044 aa22.82■■□□□ 1.24
PDLIM4-207ENST00000484620 ZC3H15Q8WU90 426 aaKnown RBP22.82■■□□□ 1.24
PDLIM4-207ENST00000484620 VEZTQ9HBM0 779 aa22.82■■□□□ 1.24
PDLIM4-207ENST00000484620 SLC4A4Q9Y6R1 1079 aa22.82■■□□□ 1.24
PDLIM4-207ENST00000484620 CDK5RAP2Q96SN8 1893 aa22.81■■□□□ 1.24
PDLIM4-207ENST00000484620 EIF5BO60841 1220 aaKnown RBP22.81■■□□□ 1.24
PDLIM4-207ENST00000484620 USP5P45974 858 aa22.81■■□□□ 1.24
PDLIM4-207ENST00000484620 TNFAIP1Q13829 316 aa22.81■■□□□ 1.24
PDLIM4-207ENST00000484620 FKBP1CQ5VVH2 108 aa22.81■■□□□ 1.24
PDLIM4-207ENST00000484620 ZNF589Q86UQ0 364 aaPredicted RBP22.81■■□□□ 1.24
PDLIM4-207ENST00000484620 APOBEC3FQ8IUX4 373 aaKnown RBP22.81■■□□□ 1.24
PDLIM4-207ENST00000484620 DDRGK1Q96HY6 314 aa22.81■■□□□ 1.24
PDLIM4-207ENST00000484620 IDI2Q9BXS1 227 aa22.81■■□□□ 1.24
PDLIM4-207ENST00000484620 PITPNM2Q9BZ72 1349 aa22.81■■□□□ 1.24
PDLIM4-207ENST00000484620 FOCADQ5VW36 1801 aa22.8■■□□□ 1.24
PDLIM4-207ENST00000484620 RPAP1Q9BWH6 1393 aaPredicted RBP22.8■■□□□ 1.24
PDLIM4-207ENST00000484620 TNNI2P48788 182 aa22.8■■□□□ 1.24
PDLIM4-207ENST00000484620 ANGEL2Q5VTE6 544 aaKnown RBP22.8■■□□□ 1.24
PDLIM4-207ENST00000484620 KIAA1211Q6ZU35 1233 aa22.8■■□□□ 1.24
PDLIM4-207ENST00000484620 TGFBRAP1Q8WUH2 860 aa22.8■■□□□ 1.24
PDLIM4-207ENST00000484620 GGA3Q9NZ52 723 aa22.8■■□□□ 1.24
PDLIM4-207ENST00000484620 NPM3O75607 178 aaKnown RBP22.79■■□□□ 1.24
PDLIM4-207ENST00000484620 WDHD1O75717 1129 aaPredicted RBP22.79■■□□□ 1.24
PDLIM4-207ENST00000484620 CACNB3P54284 484 aa22.79■■□□□ 1.24
PDLIM4-207ENST00000484620 DCPSQ96C86 337 aaKnown RBP22.79■■□□□ 1.24
PDLIM4-207ENST00000484620 NACAP1Q9BZK3 213 aa22.79■■□□□ 1.24
PDLIM4-207ENST00000484620 ATP8A2Q9NTI2 1148 aa22.79■■□□□ 1.24
PDLIM4-207ENST00000484620 CLEC11AQ9Y240 323 aa22.79■■□□□ 1.24
PDLIM4-207ENST00000484620 ASTN2O75129 1339 aaPredicted RBP22.79■■□□□ 1.24
PDLIM4-207ENST00000484620 TCP10L2B9ZVM9 353 aa22.78■■□□□ 1.24
PDLIM4-207ENST00000484620 PATL2C9JE40 543 aaKnown RBP22.78■■□□□ 1.24
PDLIM4-207ENST00000484620 APPP05067 770 aa22.78■■□□□ 1.24
PDLIM4-207ENST00000484620 PICALMQ13492 652 aa22.78■■□□□ 1.24
PDLIM4-207ENST00000484620 NAV1Q8NEY1 1877 aa22.78■■□□□ 1.24
PDLIM4-207ENST00000484620 SDR42E1Q8WUS8 393 aa22.78■■□□□ 1.24
PDLIM4-207ENST00000484620 IL25Q9H293 177 aa22.78■■□□□ 1.24
PDLIM4-207ENST00000484620 PRKAB2O43741 272 aa22.77■■□□□ 1.24
PDLIM4-207ENST00000484620 ENTPD3O75355 529 aa22.77■■□□□ 1.24
PDLIM4-207ENST00000484620 NFIAQ12857 509 aa22.77■■□□□ 1.24
PDLIM4-207ENST00000484620 GIMAP6Q6P9H5 292 aa22.77■■□□□ 1.24
PDLIM4-207ENST00000484620 FAM83AQ86UY5 434 aa22.77■■□□□ 1.24
PDLIM4-207ENST00000484620 LDHDQ86WU2 507 aa22.77■■□□□ 1.24
PDLIM4-207ENST00000484620 MAPKAPK5Q8IW41 473 aa22.77■■□□□ 1.24
PDLIM4-207ENST00000484620 PGAP2Q9UHJ9 254 aa22.77■■□□□ 1.24
PDLIM4-207ENST00000484620 FLT1P17948 1338 aa22.77■■□□□ 1.24
PDLIM4-207ENST00000484620 REC8O95072 547 aa22.76■■□□□ 1.23
PDLIM4-207ENST00000484620 GSG1L2A8MUP6 293 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms