RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SNRKQ9NRH2 765 aa15.11■□□□□ 0.01
MSH5-216ENST00000484309 ZBTB40Q9NUA8 1239 aa15.11■□□□□ 0.01
MSH5-216ENST00000484309 PDS5AQ29RF7 1337 aaKnown RBP15.11■□□□□ 0.01
MSH5-216ENST00000484309 USP2O75604 605 aaPredicted RBP15.1■□□□□ 0.01
MSH5-216ENST00000484309 LDLRAD1Q5T700 205 aa15.1■□□□□ 0.01
MSH5-216ENST00000484309 CDC42EP5Q6NZY7 148 aa15.1■□□□□ 0.01
MSH5-216ENST00000484309 TNS4Q8IZW8 715 aa15.1■□□□□ 0.01
MSH5-216ENST00000484309 CSRNP1Q96S65 589 aa15.1■□□□□ 0.01
MSH5-216ENST00000484309 DBNLQ9UJU6 430 aaKnown RBP15.1■□□□□ 0.01
MSH5-216ENST00000484309 UQCRFS1P1P0C7P4 283 aa15.09■□□□□ 0.01
MSH5-216ENST00000484309 IREB2P48200 963 aaKnown RBP15.09■□□□□ 0.01
MSH5-216ENST00000484309 TCP10Q12799 353 aa15.09■□□□□ 0.01
MSH5-216ENST00000484309 NFIAQ12857 509 aa15.09■□□□□ 0.01
MSH5-216ENST00000484309 PDE3AQ14432 1141 aa15.09■□□□□ 0.01
MSH5-216ENST00000484309 MAP3K11Q16584 847 aa15.09■□□□□ 0.01
MSH5-216ENST00000484309 SPTY2D1Q68D10 685 aaPredicted RBP15.09■□□□□ 0.01
MSH5-216ENST00000484309 ERICH6Q7L0X2 663 aa15.09■□□□□ 0.01
MSH5-216ENST00000484309 SIRT2Q8IXJ6 389 aa15.09■□□□□ 0.01
MSH5-216ENST00000484309 EAF2Q96CJ1 260 aaPredicted RBP15.09■□□□□ 0.01
MSH5-216ENST00000484309 IL1RAPL2Q9NP60 686 aa15.09■□□□□ 0.01
MSH5-216ENST00000484309 PRDM10Q9NQV6 1147 aa15.09■□□□□ 0.01
MSH5-216ENST00000484309 USP40Q9NVE5 1235 aa15.09■□□□□ 0.01
MSH5-216ENST00000484309 ZBTB22O15209 634 aa15.08■□□□□ 0
MSH5-216ENST00000484309 TRPA1O75762 1119 aa15.08■□□□□ 0
MSH5-216ENST00000484309 MECOMQ03112 1051 aa15.08■□□□□ 0
MSH5-216ENST00000484309 CCDC158Q5M9N0 1113 aa15.08■□□□□ 0
MSH5-216ENST00000484309 RPAP2Q8IXW5 612 aaPredicted RBP15.08■□□□□ 0
MSH5-216ENST00000484309 ZNF384Q8TF68 577 aa15.08■□□□□ 0
MSH5-216ENST00000484309 SLC10A4Q96EP9 437 aa15.08■□□□□ 0
MSH5-216ENST00000484309 RAI14Q9P0K7 980 aa15.08■□□□□ 0
MSH5-216ENST00000484309 FOCADQ5VW36 1801 aa15.08■□□□□ 0
MSH5-216ENST00000484309 HMMRO75330 724 aa15.07■□□□□ 0
MSH5-216ENST00000484309 BTDP43251 543 aa15.07■□□□□ 0
MSH5-216ENST00000484309 SPRYD7Q5W111 196 aa15.07■□□□□ 0
MSH5-216ENST00000484309 FAM83AQ86UY5 434 aa15.07■□□□□ 0
MSH5-216ENST00000484309 AACSQ86V21 672 aa15.07■□□□□ 0
MSH5-216ENST00000484309 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
MSH5-216ENST00000484309 WNK4Q96J92 1243 aa15.07■□□□□ 0
MSH5-216ENST00000484309 ELP3Q9H9T3 547 aa15.07■□□□□ 0
MSH5-216ENST00000484309 RNF186Q9NXI6 227 aa15.07■□□□□ 0
MSH5-216ENST00000484309 MROH7-TTC4A0A0A0MT08 1334 aa15.07■□□□□ 0
MSH5-216ENST00000484309 GAKO14976 1311 aa15.07■□□□□ 0
MSH5-216ENST00000484309 CA12O43570 354 aa15.06■□□□□ 0
MSH5-216ENST00000484309 IFFO2Q5TF58 517 aa15.06■□□□□ 0
MSH5-216ENST00000484309 FKBP1CQ5VVH2 108 aa15.06■□□□□ 0
MSH5-216ENST00000484309 ZFPM1Q8IX07 1006 aa15.06■□□□□ 0
MSH5-216ENST00000484309 ANKRD13AQ8IZ07 590 aa15.06■□□□□ 0
MSH5-216ENST00000484309 RHPN1Q8TCX5 695 aa15.06■□□□□ 0
MSH5-216ENST00000484309 CHMP4BQ9H444 224 aaKnown RBP15.06■□□□□ 0
MSH5-216ENST00000484309 LRP2BPQ9P2M1 347 aa15.06■□□□□ 0
MSH5-216ENST00000484309 FAM198AQ9UFP1 575 aa15.06■□□□□ 0
MSH5-216ENST00000484309 NDUFB9Q9Y6M9 179 aa15.06■□□□□ 0
MSH5-216ENST00000484309 RPAP1Q9BWH6 1393 aaPredicted RBP15.06■□□□□ 0
MSH5-216ENST00000484309 CAPN15O75808 1086 aa15.05■□□□□ -0
MSH5-216ENST00000484309 GJA5P36382 358 aa15.05■□□□□ -0
MSH5-216ENST00000484309 ZAP70P43403 619 aa15.05■□□□□ -0
MSH5-216ENST00000484309 RGS3P49796 1198 aa15.05■□□□□ -0
MSH5-216ENST00000484309 PICALMQ13492 652 aa15.05■□□□□ -0
MSH5-216ENST00000484309 MIGA2Q7L4E1 593 aa15.05■□□□□ -0
MSH5-216ENST00000484309 SLF2Q8IX21 1173 aa15.05■□□□□ -0
MSH5-216ENST00000484309 FAM151AQ8WW52 585 aa15.05■□□□□ -0
MSH5-216ENST00000484309 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
MSH5-216ENST00000484309 NSUN4Q96CB9 384 aaKnown RBP15.05■□□□□ -0
MSH5-216ENST00000484309 RFX7Q2KHR2 1363 aa15.05■□□□□ -0
MSH5-216ENST00000484309 ATAD5Q96QE3 1844 aa15.05■□□□□ -0
MSH5-216ENST00000484309 MYH7P12883 1935 aa15.05■□□□□ -0
MSH5-216ENST00000484309 MYH1P12882 1939 aa15.04■□□□□ -0
MSH5-216ENST00000484309 CYP2E1P05181 493 aaPredicted RBP15.04■□□□□ -0
MSH5-216ENST00000484309 RRP1P56182 461 aaKnown RBP15.04■□□□□ -0
MSH5-216ENST00000484309 VGLL4Q14135 290 aa15.04■□□□□ -0
MSH5-216ENST00000484309 HSP90AB4PQ58FF6 505 aa15.04■□□□□ -0
MSH5-216ENST00000484309 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.04■□□□□ -0
MSH5-216ENST00000484309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.04■□□□□ -0
MSH5-216ENST00000484309 PIH1D3Q9NQM4 214 aaKnown RBP15.04■□□□□ -0
MSH5-216ENST00000484309 DOCK1Q14185 1865 aa15.03■□□□□ -0
MSH5-216ENST00000484309 GSTO1P78417 241 aa15.03■□□□□ -0
MSH5-216ENST00000484309 MAP3K9P80192 1104 aa15.03■□□□□ -0
MSH5-216ENST00000484309 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
MSH5-216ENST00000484309 ZKSCAN4Q969J2 545 aaPredicted RBP15.03■□□□□ -0
MSH5-216ENST00000484309 OPTNQ96CV9 577 aa15.03■□□□□ -0
MSH5-216ENST00000484309 KIF1BPQ96EK5 621 aa15.03■□□□□ -0
MSH5-216ENST00000484309 FAM163AQ96GL9 167 aaPredicted RBP15.03■□□□□ -0
MSH5-216ENST00000484309 WRNIP1Q96S55 665 aa15.03■□□□□ -0
MSH5-216ENST00000484309 DDX4Q9NQI0 724 aaKnown RBP15.03■□□□□ -0
MSH5-216ENST00000484309 SAGE1Q9NXZ1 904 aa15.03■□□□□ -0
MSH5-216ENST00000484309 CSADQ9Y600 493 aa15.03■□□□□ -0
MSH5-216ENST00000484309 SIPA1L1O43166 1804 aa15.03■□□□□ -0
MSH5-216ENST00000484309 GPR75-ASB3A0A0A6YYF3 556 aa15.02■□□□□ -0
MSH5-216ENST00000484309 WDHD1O75717 1129 aaPredicted RBP15.02■□□□□ -0
MSH5-216ENST00000484309 TBC1D8O95759 1140 aa15.02■□□□□ -0
MSH5-216ENST00000484309 LDHCP07864 332 aa15.02■□□□□ -0
MSH5-216ENST00000484309 ZBTB48P10074 688 aaPredicted RBP15.02■□□□□ -0
MSH5-216ENST00000484309 RHBDL3P58872 404 aa15.02■□□□□ -0
MSH5-216ENST00000484309 SREBF2Q12772 1141 aa15.02■□□□□ -0
MSH5-216ENST00000484309 DCAF15Q66K64 600 aa15.02■□□□□ -0
MSH5-216ENST00000484309 NAA16Q6N069 864 aaPredicted RBP15.02■□□□□ -0
MSH5-216ENST00000484309 ZSCAN29Q8IWY8 852 aaPredicted RBP15.02■□□□□ -0
MSH5-216ENST00000484309 ZNF512BQ96KM6 892 aaPredicted RBP15.02■□□□□ -0
MSH5-216ENST00000484309 MANSC4A6NHS7 340 aaPredicted RBP15.01□□□□□ -0.01
MSH5-216ENST00000484309 UNCXA6NJT0 531 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms